1Y5EA

Crystal structure of molybdenum cofactor biosynthesis protein b
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
157
structure length
157
Chain Sequence
KEVRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGITKRDVTIEAVSALLDKEIVGFGELFRMISYLEDIGSSAMLSRAIGGTIGRKVVFSMPGSSGAVRLAMNKLILPELGHITFELHR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Molybdenum cofactor biosynthesis protein B
publication title Crystal structure of Molybdenum cofactor biosynthesis protein B
rcsb
source organism Bacillus cereus
total genus 48
structure length 157
sequence length 157
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2004-12-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 1y5eA00
4LHBA 1JLJA 2NROA 2NQKA 2NRPA 1WU2A 2PBQA 4U90A 1DI6A 2FU3A 2NQSA 3IWTA 5ERTA 3RFQA 4CTAA 1UUXA 4XCWA 2NQRA 1UUYA 2F7YA 2FTSA 4PD1A 1O8OA 2NQMA 5ERRA 4NWOA 5ERVA 1UZ5A 2G4RA 3OI9A 1MKZA 2QQ1A 1R2KA 4UOCA 3MCHA 4UUWA 5G2RA 2F7WA 4TWGA 4CT8A 2NQQA 4TK1A 5ERSA 2NQNA 3MCIA 3MCJA 4CTAB 1T3EA 2NQUA 4U91A 4CT9A 1O8NA 4TK4A 4PD0A 1XI8A 1G8RA 1IHCA 4UUXA 5ERQA 1G8LA 1Y5EA 2NQVA 4TK3A 2NRSA 1EAVA 1DI7A 1O8QA 2IS8A 3K6AA 5ERUA 3KBQA 3TCRA 3PZYA 1FC5A 5G2SA 2G2CA
chains in the Genus database with same CATH superfamily
4LHBA 2NRPA 1O8OA 1YZYA 2QQ1A 5DMHA 4UUWA 2NQQA 4TK1A 5ERSA 3MCJA 4CTAB 4TK4A 1XI8A 1Y5EA 2NQVA 5ERUA 2NROA 5ERRA 2NQKA 1WU2A 1DI6A 2NQSA 3IWTA 1UUXA 2F7YA 2NQMA 4NWOA 4UOCA 3DQQA 4TWGA 4CT8A 2NQNA 4U91A 1O8NA 4UUXA 5ERQA 1IHCA 1DI7A 1FC5A 2G2CA 1JLJA 5ERTA 2PBQA 1R2KA 3MCIA 2NQUA 4CT9A 4PD0A 1G8RA 2NRSA 1O8QA 3TCRA 3KBQA 3PZYA 4U90A 3RFQA 2FU3A 4CTAA 4XCWA 2NQRA 1UUYA 2FTSA 4PD1A 5ERVA 1UZ5A 2G4RA 3OI9A 1MKZA 3MCHA 5G2RA 2F7WA 1T3EA 1G8LA 4TK3A 1EAVA 2IS8A 3K6AA 5G2SA
chains in the Genus database with same CATH topology
4LHBA 1JLJA 2NROA 2NQKA 2NRPA 1WU2A 2PBQA 4U90A 1DI6A 2FU3A 2NQSA 3IWTA 5ERTA 3RFQA 4CTAA 1UUXA 4XCWA 2NQRA 1UUYA 2F7YA 2FTSA 4PD1A 1O8OA 2NQMA 5ERRA 4NWOA 5ERVA 1UZ5A 2G4RA 3OI9A 1MKZA 2QQ1A 1R2KA 4UOCA 3MCHA 4UUWA 5G2RA 2F7WA 4TWGA 4CT8A 2NQQA 4TK1A 5ERSA 2NQNA 3MCIA 3MCJA 4CTAB 1T3EA 2NQUA 4U91A 4CT9A 1O8NA 4TK4A 4PD0A 1XI8A 1G8RA 1IHCA 4UUXA 5ERQA 1G8LA 1Y5EA 2NQVA 4TK3A 2NRSA 1EAVA 1DI7A 1O8QA 2IS8A 3K6AA 5ERUA 3KBQA 3TCRA 3PZYA 1FC5A 5G2SA 2G2CA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4LHB A;  1JLJ A;  2NRO A;  2NQK A;  2NRP A;  1WU2 A;  2PBQ A;  4U90 A;  1DI6 A;  2FU3 A;  2NQS A;  3IWT A;  5ERT A;  3RFQ A;  4CTA A;  1UUX A;  4XCW A;  2NQR A;  1UUY A;  2F7Y A;  2FTS A;  4PD1 A;  1O8O A;  2NQM A;  5ERR A;  4NWO A;  5ERV A;  1UZ5 A;  2G4R A;  3OI9 A;  1MKZ A;  2QQ1 A;  1R2K A;  4UOC A;  3MCH A;  4UUW A;  5G2R A;  2F7W A;  4TWG A;  4CT8 A;  2NQQ A;  4TK1 A;  5ERS A;  2NQN A;  3MCI A;  3MCJ A;  4CTA B;  1T3E A;  2NQU A;  4U91 A;  4CT9 A;  1O8N A;  4TK4 A;  4PD0 A;  1XI8 A;  1G8R A;  1IHC A;  4UUX A;  5ERQ A;  1G8L A;  1Y5E A;  2NQV A;  4TK3 A;  2NRS A;  1EAV A;  1DI7 A;  1O8Q A;  2IS8 A;  3K6A A;  5ERU A;  3KBQ A;  3TCR A;  3PZY A;  1FC5 A;  5G2S A;  2G2C A; 
#chains in the Genus database with same CATH topology
 4LHB A;  2NRP A;  1O8O A;  1YZY A;  2QQ1 A;  5DMH A;  4UUW A;  2NQQ A;  4TK1 A;  5ERS A;  3MCJ A;  4CTA B;  4TK4 A;  1XI8 A;  1Y5E A;  2NQV A;  5ERU A;  2NRO A;  5ERR A;  2NQK A;  1WU2 A;  1DI6 A;  2NQS A;  3IWT A;  1UUX A;  2F7Y A;  2NQM A;  4NWO A;  4UOC A;  3DQQ A;  4TWG A;  4CT8 A;  2NQN A;  4U91 A;  1O8N A;  4UUX A;  5ERQ A;  1IHC A;  1DI7 A;  1FC5 A;  2G2C A;  1JLJ A;  5ERT A;  2PBQ A;  1R2K A;  3MCI A;  2NQU A;  4CT9 A;  4PD0 A;  1G8R A;  2NRS A;  1O8Q A;  3TCR A;  3KBQ A;  3PZY A;  4U90 A;  3RFQ A;  2FU3 A;  4CTA A;  4XCW A;  2NQR A;  1UUY A;  2FTS A;  4PD1 A;  5ERV A;  1UZ5 A;  2G4R A;  3OI9 A;  1MKZ A;  3MCH A;  5G2R A;  2F7W A;  1T3E A;  1G8L A;  4TK3 A;  1EAV A;  2IS8 A;  3K6A A;  5G2S A; 
#chains in the Genus database with same CATH homology
 4LHB A;  1JLJ A;  2NRO A;  2NQK A;  2NRP A;  1WU2 A;  2PBQ A;  4U90 A;  1DI6 A;  2FU3 A;  2NQS A;  3IWT A;  5ERT A;  3RFQ A;  4CTA A;  1UUX A;  4XCW A;  2NQR A;  1UUY A;  2F7Y A;  2FTS A;  4PD1 A;  1O8O A;  2NQM A;  5ERR A;  4NWO A;  5ERV A;  1UZ5 A;  2G4R A;  3OI9 A;  1MKZ A;  2QQ1 A;  1R2K A;  4UOC A;  3MCH A;  4UUW A;  5G2R A;  2F7W A;  4TWG A;  4CT8 A;  2NQQ A;  4TK1 A;  5ERS A;  2NQN A;  3MCI A;  3MCJ A;  4CTA B;  1T3E A;  2NQU A;  4U91 A;  4CT9 A;  1O8N A;  4TK4 A;  4PD0 A;  1XI8 A;  1G8R A;  1IHC A;  4UUX A;  5ERQ A;  1G8L A;  1Y5E A;  2NQV A;  4TK3 A;  2NRS A;  1EAV A;  1DI7 A;  1O8Q A;  2IS8 A;  3K6A A;  5ERU A;  3KBQ A;  3TCR A;  3PZY A;  1FC5 A;  5G2S A;  2G2C A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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