1Z7HA

2.3 angstrom crystal structure of tetanus neurotoxin light chain
Total Genus 124
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
124
sequence length
426
structure length
426
Chain Sequence
PITINNFRYSDPVNNDTIIMMEPPYCKGLDIYYKAFKITDRIWIVPERYEFGTKPEDFNPPSSLIEGASEYYDPNYLRTDSDKDRFLQTMVKLFNRIKNNVAGEALLDKIINAIPYLGNSYSLLDKFDTNSNSVSFNLLEQDPSGATTKSAMLTNLIIFGPGPVLNKNEVRGIVLRVDNKNYFPCRDGFGSIMQMAFCPEYVPTFDNVIENITSLTIGKSKYFQDPALLLMHELIHVLHGLYGMQVSSHEIIPSKQEIYMQHTYPISAEELFTFGGQDANLISIDIKNDLYEKTLNDYKAIANKLSQVTSCNDPNIDIDSYKQIYQQKYQFDKDSNGQYIVNEDKFQILYNSIMYGFTEVELGKKFNIKTRLSYFSMNHDPVKIPNLLDDTIYNDTEGFNIESKDLKSEYKGQNMRVNTNAFRNVD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Tetanus toxin light chain
publication title 2.3A Crystal structure of tetanus neurotoxin light chain
pubmed doi rcsb
source organism Clostridium tetani
total genus 124
structure length 426
sequence length 426
ec nomenclature ec 3.4.24.68: Tentoxilysin.
pdb deposition date 2005-03-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01742 Peptidase_M27 Clostridial neurotoxin zinc protease
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1240.10 Alpha Beta Alpha-Beta Complex Zincin-like Metalloproteases ("zincins"), catalytic domain like 1z7hA00
3FIEA 1ZL5A 3QW6A 3V0BA 3DDBA 3FIIA 3DSEA 3V0BB 3FFZA 4J1LA 1F82A 2A97A 4EJ5A 3QW7A 2ETFA 1G9DA 1S0DA 4KUFA 3D3XA 4ZKTB 2ISHA 3BOOA 1ZL6A 2G7KA 3QW5A 3BWIA 2NZ9A 1XTFA 3DS9A 1Z7HA 2A8AA 2IMCA 1G9BA 1S0FA 3BOKA 2W2DA 2NP0A 2XHLA 3C8AA 1E1HA 1ZKXA 2ISGA 2ISEA 3QIXA 2FPQA 4HEVA 3QJ0A 3ZUQA 2QN0A 3QIZA 2G7QA 1EPWA 3QW8A 1ZB7A 4KS6A 1S0CA 3K3QB 1T3AA 1YVGA 3V0AA 1G9CA 3ZURA 2G7NA 3V0AB 3QIYA 3DDAA 3C89A 3C8BA 5BQNA 2G7PA 2IMBA 1G9AA 1I1EA 1ZKWA 2IMAA 1ZN3A 4EL4A 3ZUSA 4ZJXA 5BQMA 3BTAA 3DEBA 4KTXA 1T3CA 2NYYA 4ELCA 3VUOA 1S0BA 2ILPA 1S0GA 1F31A 3BONA 1S0EA 3NF3A 1XTGA 3C88A
chains in the Genus database with same CATH superfamily
3FIEA 1ZL5A 3QW6A 3V0BA 3DDBA 3CQBA 3FIIA 3DSEA 4JIUA 3FFZA 4J1LA 1F82A 3V0BB 2A97A 4EJ5A 3QW7A 2ETFA 1G9DA 1S0DA 4KUFA 3D3XA 4ZKTB 2ISHA 3BOOA 1ZL6A 2G7KA 3QW5A 3BWIA 2NZ9A 1XTFA 3DS9A 1Z7HA 2A8AA 2IMCA 1G9BA 1S0FA 3BOKA 2W2DA 3E11A 2NP0A 2XHLA 2EJQA 3C8AA 1E1HA 4QHFA 1ZKXA 2ISGA 2ISEA 3QIXA 2FPQA 4HEVA 3QJ0A 3ZUQA 2QN0A 3QIZA 2G7QA 1EPWA 3QW8A 1ZB7A 4KS6A 1S0CA 3K3QB 1T3AA 1YVGA 3V0AA 1G9CA 4AW6A 3ZURA 2G7NA 3V0AB 3QIYA 3DDAA 3C89A 3C8BA 5BQNA 2G7PA 2IMBA 1G9AA 4IL3A 1I1EA 1ZKWA 2IMAA 1ZN3A 4EL4A 3ZUSA 4ZJXA 5BQMA 3BTAA 3DEBA 4KTXA 1T3CA 2NYYA 4ELCA 3VUOA 1S0BA 2YPTA 2ILPA 1S0GA 1F31A 3BONA 1S0EA 4JIXA 3NF3A 1XTGA 3C88A
chains in the Genus database with same CATH topology
3FIEA 1ZL5A 3QW6A 3V0BA 3DDBA 3FIIA 3DSEA 3V0BB 3FFZA 4J1LA 1F82A 2A97A 4EJ5A 3QW7A 2ETFA 1G9DA 1S0DA 4KUFA 3D3XA 4ZKTB 2ISHA 3BOOA 1ZL6A 2G7KA 3QW5A 3BWIA 2NZ9A 1XTFA 3DS9A 1Z7HA 2A8AA 2IMCA 1G9BA 1S0FA 3BOKA 2W2DA 2NP0A 2XHLA 3C8AA 1E1HA 1ZKXA 2ISGA 2ISEA 3QIXA 2FPQA 4HEVA 3QJ0A 3ZUQA 2QN0A 3QIZA 2G7QA 1EPWA 3QW8A 1ZB7A 4KS6A 1S0CA 3K3QB 1T3AA 1YVGA 3V0AA 1G9CA 3ZURA 2G7NA 3V0AB 3QIYA 3DDAA 3C89A 3C8BA 5BQNA 2G7PA 2IMBA 1G9AA 1I1EA 1ZKWA 2IMAA 1ZN3A 4EL4A 3ZUSA 4ZJXA 5BQMA 3BTAA 3DEBA 4KTXA 1T3CA 2NYYA 4ELCA 3VUOA 1S0BA 2ILPA 1S0GA 1F31A 3BONA 1S0EA 3NF3A 1XTGA 3C88A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FIE A;  1ZL5 A;  3QW6 A;  3V0B A;  3DDB A;  3FII A;  3DSE A;  3V0B B;  3FFZ A;  4J1L A;  1F82 A;  2A97 A;  4EJ5 A;  3QW7 A;  2ETF A;  1G9D A;  1S0D A;  4KUF A;  3D3X A;  4ZKT B;  2ISH A;  3BOO A;  1ZL6 A;  2G7K A;  3QW5 A;  3BWI A;  2NZ9 A;  1XTF A;  3DS9 A;  1Z7H A;  2A8A A;  2IMC A;  1G9B A;  1S0F A;  3BOK A;  2W2D A;  2NP0 A;  2XHL A;  3C8A A;  1E1H A;  1ZKX A;  2ISG A;  2ISE A;  3QIX A;  2FPQ A;  4HEV A;  3QJ0 A;  3ZUQ A;  2QN0 A;  3QIZ A;  2G7Q A;  1EPW A;  3QW8 A;  1ZB7 A;  4KS6 A;  1S0C A;  3K3Q B;  1T3A A;  1YVG A;  3V0A A;  1G9C A;  3ZUR A;  2G7N A;  3V0A B;  3QIY A;  3DDA A;  3C89 A;  3C8B A;  5BQN A;  2G7P A;  2IMB A;  1G9A A;  1I1E A;  1ZKW A;  2IMA A;  1ZN3 A;  4EL4 A;  3ZUS A;  4ZJX A;  5BQM A;  3BTA A;  3DEB A;  4KTX A;  1T3C A;  2NYY A;  4ELC A;  3VUO A;  1S0B A;  2ILP A;  1S0G A;  1F31 A;  3BON A;  1S0E A;  3NF3 A;  1XTG A;  3C88 A; 
#chains in the Genus database with same CATH topology
 3FIE A;  1ZL5 A;  3QW6 A;  3V0B A;  3DDB A;  3CQB A;  3FII A;  3DSE A;  4JIU A;  3FFZ A;  4J1L A;  1F82 A;  3V0B B;  2A97 A;  4EJ5 A;  3QW7 A;  2ETF A;  1G9D A;  1S0D A;  4KUF A;  3D3X A;  4ZKT B;  2ISH A;  3BOO A;  1ZL6 A;  2G7K A;  3QW5 A;  3BWI A;  2NZ9 A;  1XTF A;  3DS9 A;  1Z7H A;  2A8A A;  2IMC A;  1G9B A;  1S0F A;  3BOK A;  2W2D A;  3E11 A;  2NP0 A;  2XHL A;  2EJQ A;  3C8A A;  1E1H A;  4QHF A;  1ZKX A;  2ISG A;  2ISE A;  3QIX A;  2FPQ A;  4HEV A;  3QJ0 A;  3ZUQ A;  2QN0 A;  3QIZ A;  2G7Q A;  1EPW A;  3QW8 A;  1ZB7 A;  4KS6 A;  1S0C A;  3K3Q B;  1T3A A;  1YVG A;  3V0A A;  1G9C A;  4AW6 A;  3ZUR A;  2G7N A;  3V0A B;  3QIY A;  3DDA A;  3C89 A;  3C8B A;  5BQN A;  2G7P A;  2IMB A;  1G9A A;  4IL3 A;  1I1E A;  1ZKW A;  2IMA A;  1ZN3 A;  4EL4 A;  3ZUS A;  4ZJX A;  5BQM A;  3BTA A;  3DEB A;  4KTX A;  1T3C A;  2NYY A;  4ELC A;  3VUO A;  1S0B A;  2YPT A;  2ILP A;  1S0G A;  1F31 A;  3BON A;  1S0E A;  4JIX A;  3NF3 A;  1XTG A;  3C88 A; 
#chains in the Genus database with same CATH homology
 3FIE A;  1ZL5 A;  3QW6 A;  3V0B A;  3DDB A;  3FII A;  3DSE A;  3V0B B;  3FFZ A;  4J1L A;  1F82 A;  2A97 A;  4EJ5 A;  3QW7 A;  2ETF A;  1G9D A;  1S0D A;  4KUF A;  3D3X A;  4ZKT B;  2ISH A;  3BOO A;  1ZL6 A;  2G7K A;  3QW5 A;  3BWI A;  2NZ9 A;  1XTF A;  3DS9 A;  1Z7H A;  2A8A A;  2IMC A;  1G9B A;  1S0F A;  3BOK A;  2W2D A;  2NP0 A;  2XHL A;  3C8A A;  1E1H A;  1ZKX A;  2ISG A;  2ISE A;  3QIX A;  2FPQ A;  4HEV A;  3QJ0 A;  3ZUQ A;  2QN0 A;  3QIZ A;  2G7Q A;  1EPW A;  3QW8 A;  1ZB7 A;  4KS6 A;  1S0C A;  3K3Q B;  1T3A A;  1YVG A;  3V0A A;  1G9C A;  3ZUR A;  2G7N A;  3V0A B;  3QIY A;  3DDA A;  3C89 A;  3C8B A;  5BQN A;  2G7P A;  2IMB A;  1G9A A;  1I1E A;  1ZKW A;  2IMA A;  1ZN3 A;  4EL4 A;  3ZUS A;  4ZJX A;  5BQM A;  3BTA A;  3DEB A;  4KTX A;  1T3C A;  2NYY A;  4ELC A;  3VUO A;  1S0B A;  2ILP A;  1S0G A;  1F31 A;  3BON A;  1S0E A;  3NF3 A;  1XTG A;  3C88 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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