1ZFLA

Solution structure of iii-a, the major intermediate in the oxidative folding of leech carboxypeptidase inhibitor
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
67
structure length
67
Chain Sequence
GSHTPDESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPYVE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords Metallocarboxypeptidase inhibitor
publication title NMR structural characterization and computational predictions of the major intermediate in oxidative folding of leech carboxypeptidase inhibitor
pubmed doi rcsb
source organism Hirudo medicinalis
total genus 4
structure length 67
sequence length 67
ec nomenclature
pdb deposition date 2005-04-20
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1040.10 Alpha Beta 2-Layer Sandwich Carboxypeptidase Inhibitor; Chain A Carboxypeptidase inhibitor 1zflA00
1DTVA 1DTDB 2ABZC 1ZFLA 1ZFIA
chains in the Genus database with same CATH superfamily
4BIKA 1M3IA 3HVNA 3G2OA 1DTDB 3G2MA 3IF8B 2ABZC 1ZFLA 3CQFA 1ZFIA 4HSCX 3PJVD 3G2PA 3G2QA 1DTVA 1S3RA 1PFOA 1M3JA
chains in the Genus database with same CATH topology
1DTVA 1DTDB 2ABZC 1ZFLA 1ZFIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DTV A;  1DTD B;  2ABZ C;  1ZFL A;  1ZFI A; 
#chains in the Genus database with same CATH topology
 4BIK A;  1M3I A;  3HVN A;  3G2O A;  1DTD B;  3G2M A;  3IF8 B;  2ABZ C;  1ZFL A;  3CQF A;  1ZFI A;  4HSC X;  3PJV D;  3G2P A;  3G2Q A;  1DTV A;  1S3R A;  1PFO A;  1M3J A; 
#chains in the Genus database with same CATH homology
 1DTV A;  1DTD B;  2ABZ C;  1ZFL A;  1ZFI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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