1AF8A

Actinorhodin polyketide synthase acyl carrier protein from streptomyces coelicolor a3(2), nmr, 24 structures
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
86
structure length
86
Chain Sequence
MATLLTTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antibiotic biosynthesis
molecule keywords ACTINORHODIN POLYKETIDE SYNTHASE ACYL CARRIER PROTEIN
publication title Solution structure of the actinorhodin polyketide synthase acyl carrier protein from Streptomyces coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
total genus 16
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 1997-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 1af8A00
2N6YA 4CA3A 2FVAA 2VSQA 2GDWA 2LOLA 2LL8A 2LIUA 3EJBA 2K93A 2KG9A 2GDYA 2FACA 4NEOA 2LMLA 5KP6B 4HKGA 2GDXA 2XZ1C 2KG6A 2X2BA 4BPFA 1ACPA 2LTEA 3NY7B 4PXHB 2AFEA 4BPGA 3EJDA 4BPHA 1DNYA 3GZMA 2FQ2A 2PNGA 2K94A 2KWLA 3CE7A 2KR5A 2FADA 2LPKA 2JU1A 2AF8A 2KGEA 4R0MA 1L0HA 3RG2A 2CGQA 5CZDB 2KOPA 4H2WC 2MVVA 2LKIA 5KP8B 2EHTA 2JQ4A 5KP7B 2K0XA 2L4BA 2KGCA 2N50A 4MRTC 2MR7A 2AVAA 2MD9A 1X3OA 2KGAA 2KOSA 4PWVB 1VKUA 2KGDA 1HY8A 1F80D 2XZ0D 1DV5A 1HQBA 2MY5A 2EHSA 1NQ4A 5HV8A 2MF4A 4IZ6A 2CQ8A 2MVUA 2FQ0A 2DNWA 2K0YA 2FQ1A 5EJDA 2N6ZA 2KOOA 2N5IA 2JGPA 2N5HA 2N98A 2FVFA 2L9FA 2L22A 2CG5B 2L0QA 1AF8A 2FHSC 2FAEA 1OR5A 2JU2A 2K92A 2ROQA 4DG9A 3EJEA 1T8KA 2KOQA 2K2QA 1KLPA 2KW2A 2CNRA 4H2YC 3LMOA 2AFDA 4H2XC 5HVCA 2KG8A 3GZLA 1L0IA 2MR8A 2QNWA 2KORA 2M5RA 2LIWA 2FVEA
chains in the Genus database with same CATH superfamily
4CA3A 1VQ7P 2PY8A 2VSQA 3MGEA 2LL8A 7CEIA 3HYBA 2K93A 2GDYA 2GDXA 2Z44A 2KG6A 2JYLA 2X2BA 2LTEA 1DNYA 3GZMA 2PNGA 3CCLP 2KWLA 3NTEA 3CD6P 3CE7A 2FADA 2LPKA 3DPHA 3CCVP 3VRLC 2KGEA 2LF4A 2K5XA 2MVVA 2EHTA 1VQ8P 3CCUP 2K0XA 3E2DA 1GPJA 5F2NA 2N50A 3DS4A 2AVAA 1UNKA 2MD9A 4COPA 4XFZA 2XZ0D 1DV5A 1M6EX 2MY5A 3GJNA 2MF4A 2MVUA 5F2KA 1A8OA 1VHNA 2FQ1A 5EJDA 2N6ZA 2JGPA 4QKOA 3DS2A 2FAEA 3M1MA 4XFXA 1ZNVA 2K92A 2ROQA 3H47A 2M8PA 2OTJP 2PEOA 2CNRA 2VLQA 2CWOA 2PEQA 1YJWP 5HVCA 3DS3A 4U0EA 3GZLA 2JYGA 2VLNA 4U0DA 2M5RA 1RNIA 2PEIA 3DS5A 4IPYA 3G21A 2FVAA 2GZFA 2PEKA 1KC8Q 1NJIQ 1K73Q 2LIUA 1K8AQ 1Z6MA 2FACA 4HKGA 3CCMP 4PXHB 4BPGA 4BPHA 2KODA 2FQ2A 2JBGA 2M8LA 1EMVA 3Q20A 4R0MA 1GXHA 1AUMA 2VLOA 2KOPA 4H2WC 3DS1A 3H4EA 2JQ4A 2DGYA 2EFJA 2KGCA 5BS1A 1S72P 1Q81Q 2MR7A 2PENA 5DCKA 4PWVB 4GR2A 2XT1A 1HQBA 2Z46A 5HV8A 3CCSP 1A43A 4XRQA 2L6EA 2JAZA 5HGLA 4WYMA 2N5IA 3G6EP 2N98A 3GKLC 1YJ9P 2L9FA 2CG5B 5JPAA 2L0QA 1AF8A 5I4TG 3WBHA 2JU2A 1T8KA 1CEIA 2KW2A 3LMOA 4H2XC 1VQOP 1IUQA 2GYKA 2JB0A 2JO0A 1RO0A 3G28A 1QVGO 1Q86Q 2LOLA 3CPWO 3G1GA 2NO8A 2PEMA 2P9XA 5KP6B 1ACPA 1E0HA 4U0AA 2AFEA 3G29A 2ERHA 3EJDA 3G26A 1M6NA 2JU1A 1L0HA 3G71P 1M90Q 2CGQA 5EW5E 1FR2A 5KP8B 2VLPA 2ONTA 1W2BO 4XFYA 2BUOA 2L4BA 1KD1Q 2QA4P 2XXMA 1JJ2O 1X3OA 2KGAA 3CCRP 1MZ8A 1VKUA 2KGDA 3LRYA 4U0CA 1YJNP 1M1KQ 1VQKP 4IZ6A 2CQ8A 3U43A 1N8RQ 2K0YA 3CCJP 1GXGA 2WPTA 1YI2P 2QEXP 1EIAA 3CCQP 2FVFA 3RG6C 1K9MQ 3CC7P 5BS2A 1K30A 2KOQA 2K2QA 5HGMA 1VQ5P 3I56P 1QVFO 2OTLP 4PH0A 1IMQA 2AFDA 2KG8A 3CXCO 4XROA 1L0IA 2MR8A 4QNBA 3CMAP 2EG5A 1YIJP 3B4QA 2KORA 2LIWA 1VQ9P 1M74A 2FVEA 1QRJA 1ZMBA 2N6YA 3DTJA 1Q82Q 2GDWA 2OARA 4U0FA 4PH1A 4F37A 5HGNA 3EJBA 1VQMP 2KG9A 4GR6A 1E6JP 4NEOA 2LMLA 3OW2O 2XZ1C 4BPFA 3NY7B 4COCA 3CCEP 3H0DA 1Q7YQ 1VQLP 2K94A 3HZQA 2KR5A 2XV6A 1YITP 2AF8A 1D1DA 3RG2A 1IMPA 5CZDB 3I55P 4M0IA 2GZEA 2K0DX 2BHVA 2LKIA 1EOQA 3CMEP 1BAJA 4UHPB 3CC4P 1UJZA 2M8NA 2Z45A 2GZIA 5KP7B 3CC2P 2EIAA 4MRTC 1RO2A 2GZJA 1YHQP 2KOSA 1HY8A 1F80D 2GZGA 5F2OA 2EHSA 1NQ4A 3P05A 1VQNP 3G4SP 1VQ6P 2FQ0A 2DNWA 1VQ4P 3G0VA 2KOOA 2N5HA 4U0BA 2L22A 1VQPP 2FHSC 5HGOA 1OR5A 3B5IA 4DG9A 3DS0A 3EJEA 1AYIA 2PEJA 1BXIA 1KLPA 4H2YC 3G1IA 2QNWA 1KQSO 2E1MA
chains in the Genus database with same CATH topology
2N6YA 4CA3A 2FVAA 2VSQA 2GDWA 2LOLA 2LL8A 2LIUA 3EJBA 2K93A 2KG9A 2GDYA 2FACA 4NEOA 2LMLA 5KP6B 4HKGA 2GDXA 2XZ1C 2KG6A 2X2BA 4BPFA 1ACPA 2LTEA 3NY7B 4PXHB 2AFEA 4BPGA 3EJDA 4BPHA 1DNYA 3GZMA 2FQ2A 2PNGA 2K94A 2KWLA 3CE7A 2KR5A 2FADA 2LPKA 2JU1A 2AF8A 2KGEA 4R0MA 1L0HA 3RG2A 2CGQA 5CZDB 2KOPA 4H2WC 2MVVA 2LKIA 5KP8B 2EHTA 2JQ4A 5KP7B 2K0XA 2L4BA 2KGCA 2N50A 4MRTC 2MR7A 2AVAA 2MD9A 1X3OA 2KGAA 2KOSA 4PWVB 1VKUA 2KGDA 1HY8A 1F80D 2XZ0D 1DV5A 1HQBA 2MY5A 2EHSA 1NQ4A 5HV8A 2MF4A 4IZ6A 2CQ8A 2MVUA 2FQ0A 2DNWA 2K0YA 2FQ1A 5EJDA 2N6ZA 2KOOA 2N5IA 2JGPA 2N5HA 2N98A 2FVFA 2L9FA 2L22A 2CG5B 2L0QA 1AF8A 2FHSC 2FAEA 1OR5A 2JU2A 2K92A 2ROQA 4DG9A 3EJEA 1T8KA 2KOQA 2K2QA 1KLPA 2KW2A 2CNRA 4H2YC 3LMOA 2AFDA 4H2XC 5HVCA 2KG8A 3GZLA 1L0IA 2MR8A 2QNWA 2KORA 2M5RA 2LIWA 2FVEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2N6Y A;  4CA3 A;  2FVA A;  2VSQ A;  2GDW A;  2LOL A;  2LL8 A;  2LIU A;  3EJB A;  2K93 A;  2KG9 A;  2GDY A;  2FAC A;  4NEO A;  2LML A;  5KP6 B;  4HKG A;  2GDX A;  2XZ1 C;  2KG6 A;  2X2B A;  4BPF A;  1ACP A;  2LTE A;  3NY7 B;  4PXH B;  2AFE A;  4BPG A;  3EJD A;  4BPH A;  1DNY A;  3GZM A;  2FQ2 A;  2PNG A;  2K94 A;  2KWL A;  3CE7 A;  2KR5 A;  2FAD A;  2LPK A;  2JU1 A;  2AF8 A;  2KGE A;  4R0M A;  1L0H A;  3RG2 A;  2CGQ A;  5CZD B;  2KOP A;  4H2W C;  2MVV A;  2LKI A;  5KP8 B;  2EHT A;  2JQ4 A;  5KP7 B;  2K0X A;  2L4B A;  2KGC A;  2N50 A;  4MRT C;  2MR7 A;  2AVA A;  2MD9 A;  1X3O A;  2KGA A;  2KOS A;  4PWV B;  1VKU A;  2KGD A;  1HY8 A;  1F80 D;  2XZ0 D;  1DV5 A;  1HQB A;  2MY5 A;  2EHS A;  1NQ4 A;  5HV8 A;  2MF4 A;  4IZ6 A;  2CQ8 A;  2MVU A;  2FQ0 A;  2DNW A;  2K0Y A;  2FQ1 A;  5EJD A;  2N6Z A;  2KOO A;  2N5I A;  2JGP A;  2N5H A;  2N98 A;  2FVF A;  2L9F A;  2L22 A;  2CG5 B;  2L0Q A;  1AF8 A;  2FHS C;  2FAE A;  1OR5 A;  2JU2 A;  2K92 A;  2ROQ A;  4DG9 A;  3EJE A;  1T8K A;  2KOQ A;  2K2Q A;  1KLP A;  2KW2 A;  2CNR A;  4H2Y C;  3LMO A;  2AFD A;  4H2X C;  5HVC A;  2KG8 A;  3GZL A;  1L0I A;  2MR8 A;  2QNW A;  2KOR A;  2M5R A;  2LIW A;  2FVE A; 
#chains in the Genus database with same CATH topology
 4CA3 A;  1VQ7 P;  2PY8 A;  2VSQ A;  3MGE A;  2LL8 A;  7CEI A;  3HYB A;  2K93 A;  2GDY A;  2GDX A;  2Z44 A;  2KG6 A;  2JYL A;  2X2B A;  2LTE A;  1DNY A;  3GZM A;  2PNG A;  3CCL P;  2KWL A;  3NTE A;  3CD6 P;  3CE7 A;  2FAD A;  2LPK A;  3DPH A;  3CCV P;  3VRL C;  2KGE A;  2LF4 A;  2K5X A;  2MVV A;  2EHT A;  1VQ8 P;  3CCU P;  2K0X A;  3E2D A;  1GPJ A;  5F2N A;  2N50 A;  3DS4 A;  2AVA A;  1UNK A;  2MD9 A;  4COP A;  4XFZ A;  2XZ0 D;  1DV5 A;  1M6E X;  2MY5 A;  3GJN A;  2MF4 A;  2MVU A;  5F2K A;  1A8O A;  1VHN A;  2FQ1 A;  5EJD A;  2N6Z A;  2JGP A;  4QKO A;  3DS2 A;  2FAE A;  3M1M A;  4XFX A;  1ZNV A;  2K92 A;  2ROQ A;  3H47 A;  2M8P A;  2OTJ P;  2PEO A;  2CNR A;  2VLQ A;  2CWO A;  2PEQ A;  1YJW P;  5HVC A;  3DS3 A;  4U0E A;  3GZL A;  2JYG A;  2VLN A;  4U0D A;  2M5R A;  1RNI A;  2PEI A;  3DS5 A;  4IPY A;  3G21 A;  2FVA A;  2GZF A;  2PEK A;  1KC8 Q;  1NJI Q;  1K73 Q;  2LIU A;  1K8A Q;  1Z6M A;  2FAC A;  4HKG A;  3CCM P;  4PXH B;  4BPG A;  4BPH A;  2KOD A;  2FQ2 A;  2JBG A;  2M8L A;  1EMV A;  3Q20 A;  4R0M A;  1GXH A;  1AUM A;  2VLO A;  2KOP A;  4H2W C;  3DS1 A;  3H4E A;  2JQ4 A;  2DGY A;  2EFJ A;  2KGC A;  5BS1 A;  1S72 P;  1Q81 Q;  2MR7 A;  2PEN A;  5DCK A;  4PWV B;  4GR2 A;  2XT1 A;  1HQB A;  2Z46 A;  5HV8 A;  3CCS P;  1A43 A;  4XRQ A;  2L6E A;  2JAZ A;  5HGL A;  4WYM A;  2N5I A;  3G6E P;  2N98 A;  3GKL C;  1YJ9 P;  2L9F A;  2CG5 B;  5JPA A;  2L0Q A;  1AF8 A;  5I4T G;  3WBH A;  2JU2 A;  1T8K A;  1CEI A;  2KW2 A;  3LMO A;  4H2X C;  1VQO P;  1IUQ A;  2GYK A;  2JB0 A;  2JO0 A;  1RO0 A;  3G28 A;  1QVG O;  1Q86 Q;  2LOL A;  3CPW O;  3G1G A;  2NO8 A;  2PEM A;  2P9X A;  5KP6 B;  1ACP A;  1E0H A;  4U0A A;  2AFE A;  3G29 A;  2ERH A;  3EJD A;  3G26 A;  1M6N A;  2JU1 A;  1L0H A;  3G71 P;  1M90 Q;  2CGQ A;  5EW5 E;  1FR2 A;  5KP8 B;  2VLP A;  2ONT A;  1W2B O;  4XFY A;  2BUO A;  2L4B A;  1KD1 Q;  2QA4 P;  2XXM A;  1JJ2 O;  1X3O A;  2KGA A;  3CCR P;  1MZ8 A;  1VKU A;  2KGD A;  3LRY A;  4U0C A;  1YJN P;  1M1K Q;  1VQK P;  4IZ6 A;  2CQ8 A;  3U43 A;  1N8R Q;  2K0Y A;  3CCJ P;  1GXG A;  2WPT A;  1YI2 P;  2QEX P;  1EIA A;  3CCQ P;  2FVF A;  3RG6 C;  1K9M Q;  3CC7 P;  5BS2 A;  1K30 A;  2KOQ A;  2K2Q A;  5HGM A;  1VQ5 P;  3I56 P;  1QVF O;  2OTL P;  4PH0 A;  1IMQ A;  2AFD A;  2KG8 A;  3CXC O;  4XRO A;  1L0I A;  2MR8 A;  4QNB A;  3CMA P;  2EG5 A;  1YIJ P;  3B4Q A;  2KOR A;  2LIW A;  1VQ9 P;  1M74 A;  2FVE A;  1QRJ A;  1ZMB A;  2N6Y A;  3DTJ A;  1Q82 Q;  2GDW A;  2OAR A;  4U0F A;  4PH1 A;  4F37 A;  5HGN A;  3EJB A;  1VQM P;  2KG9 A;  4GR6 A;  1E6J P;  4NEO A;  2LML A;  3OW2 O;  2XZ1 C;  4BPF A;  3NY7 B;  4COC A;  3CCE P;  3H0D A;  1Q7Y Q;  1VQL P;  2K94 A;  3HZQ A;  2KR5 A;  2XV6 A;  1YIT P;  2AF8 A;  1D1D A;  3RG2 A;  1IMP A;  5CZD B;  3I55 P;  4M0I A;  2GZE A;  2K0D X;  2BHV A;  2LKI A;  1EOQ A;  3CME P;  1BAJ A;  4UHP B;  3CC4 P;  1UJZ A;  2M8N A;  2Z45 A;  2GZI A;  5KP7 B;  3CC2 P;  2EIA A;  4MRT C;  1RO2 A;  2GZJ A;  1YHQ P;  2KOS A;  1HY8 A;  1F80 D;  2GZG A;  5F2O A;  2EHS A;  1NQ4 A;  3P05 A;  1VQN P;  3G4S P;  1VQ6 P;  2FQ0 A;  2DNW A;  1VQ4 P;  3G0V A;  2KOO A;  2N5H A;  4U0B A;  2L22 A;  1VQP P;  2FHS C;  5HGO A;  1OR5 A;  3B5I A;  4DG9 A;  3DS0 A;  3EJE A;  1AYI A;  2PEJ A;  1BXI A;  1KLP A;  4H2Y C;  3G1I A;  2QNW A;  1KQS O;  2E1M A; 
#chains in the Genus database with same CATH homology
 2N6Y A;  4CA3 A;  2FVA A;  2VSQ A;  2GDW A;  2LOL A;  2LL8 A;  2LIU A;  3EJB A;  2K93 A;  2KG9 A;  2GDY A;  2FAC A;  4NEO A;  2LML A;  5KP6 B;  4HKG A;  2GDX A;  2XZ1 C;  2KG6 A;  2X2B A;  4BPF A;  1ACP A;  2LTE A;  3NY7 B;  4PXH B;  2AFE A;  4BPG A;  3EJD A;  4BPH A;  1DNY A;  3GZM A;  2FQ2 A;  2PNG A;  2K94 A;  2KWL A;  3CE7 A;  2KR5 A;  2FAD A;  2LPK A;  2JU1 A;  2AF8 A;  2KGE A;  4R0M A;  1L0H A;  3RG2 A;  2CGQ A;  5CZD B;  2KOP A;  4H2W C;  2MVV A;  2LKI A;  5KP8 B;  2EHT A;  2JQ4 A;  5KP7 B;  2K0X A;  2L4B A;  2KGC A;  2N50 A;  4MRT C;  2MR7 A;  2AVA A;  2MD9 A;  1X3O A;  2KGA A;  2KOS A;  4PWV B;  1VKU A;  2KGD A;  1HY8 A;  1F80 D;  2XZ0 D;  1DV5 A;  1HQB A;  2MY5 A;  2EHS A;  1NQ4 A;  5HV8 A;  2MF4 A;  4IZ6 A;  2CQ8 A;  2MVU A;  2FQ0 A;  2DNW A;  2K0Y A;  2FQ1 A;  5EJD A;  2N6Z A;  2KOO A;  2N5I A;  2JGP A;  2N5H A;  2N98 A;  2FVF A;  2L9F A;  2L22 A;  2CG5 B;  2L0Q A;  1AF8 A;  2FHS C;  2FAE A;  1OR5 A;  2JU2 A;  2K92 A;  2ROQ A;  4DG9 A;  3EJE A;  1T8K A;  2KOQ A;  2K2Q A;  1KLP A;  2KW2 A;  2CNR A;  4H2Y C;  3LMO A;  2AFD A;  4H2X C;  5HVC A;  2KG8 A;  3GZL A;  1L0I A;  2MR8 A;  2QNW A;  2KOR A;  2M5R A;  2LIW A;  2FVE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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