1AK7A

Destrin, nmr, 20 structures
Total Genus 19
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
174
structure length
174
Chain Sequence
TMITPSSGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKLGGSLIVAFEGCPV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Actin depolymerization factor
molecule keywords DESTRIN
publication title Tertiary structure of destrin and structural similarity between two actin-regulating protein families.
pubmed doi rcsb
source organism Sus scrofa
total genus 19
structure length 174
sequence length 174
ec nomenclature
pdb deposition date 1997-05-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00241 Cofilin_ADF Cofilin/tropomyosin-type actin-binding protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1ak7A00
5KYXB 4BEX1 2NUPB 2XF1A 3EGDA 1NLVG 1M2VB 1QPVA 1TVJA 3FFKA 2NUTA 1P8XA 1J72A 1TMWA 1CNUA 1DEJS 2FF6G 3EG9A 4PKHB 1ESVS 2HD7A 3EFOB 1Q8XA 1NMDG 1C0GS 1YVNG 5HVKD 1X67A 1COFA 5KYWA 4KEEA 3EGXA 2FH1A 5DD2A 3CI5G 5FAEA 1AK7A 3EG9B 3EH1A 1H1VG 1T44G 1MDUA 1YAGG 4LIZA 1SVQA 2L72A 2LLFA 3DAWB 5KYUB 3A5NS 1AHQA 3Q2BA 3A5OS 1WNJA 5HVKB 2VACA 3CJBG 3FG7A 4KEFA 1F7SA 1NPHA 4Z94G 1KCQA 2VIKA 5L6WC 3EGDB 1PCXA 3TU5B 2NUTB 4CBWG 2FF3A 2MP4A 2FH3A 1T3XA 2LJ8A 4PKGG 5IVUA 2FH4A 3L50A 4JD2H 5KYYA 5KYWB 1SVYA 1EQYS 1AK6A 3FFNA 3EGXB 1UDMA 1HQZ1 1D0NA 4S10C 2I2QA 4KEDA 1CFYA 2KVKA 4PKIG 2QTVA 4CBUG 3A5MS 3EFOA 1P8ZG 1WM4A 2W0IA 1T2LA 1VKKA 3A5LS 1C0FS 1VFQA 3CJCG 2D8BA 4CBXG 1V6FA 1WFSA 3FG6A 2MOTA 1T3YA 1D4XG 1JHWA 2MV2A 5KYXA 2XFAA 1Q8GA 2NUPA 1PD0A 1SVRA 1M2VA 1NM1G 2FH2A 5KYUA 1RGIG 1M2OA 5KYNA 5A1MA 1M4JA 1PD1A 2LXXA 2VILA 3CIPG 3EH2A 5FAFA 5KYYB 2FGHA
chains in the Genus database with same CATH superfamily
5KYXB 4BEX1 2NUPB 2XF1A 3EGDA 1NLVG 1M2VB 1QPVA 1TVJA 3FFKA 2NUTA 1P8XA 1J72A 1TMWA 1CNUA 1DEJS 2FF6G 3EG9A 4PKHB 1ESVS 2HD7A 3EFOB 1Q8XA 1NMDG 1C0GS 1YVNG 5HVKD 1X67A 1COFA 5KYWA 4KEEA 3EGXA 2FH1A 5DD2A 3CI5G 5FAEA 1AK7A 3EG9B 3EH1A 1H1VG 1T44G 1MDUA 1YAGG 4LIZA 1SVQA 2L72A 2LLFA 3DAWB 5KYUB 3A5NS 1AHQA 3Q2BA 3A5OS 1WNJA 5HVKB 2VACA 3CJBG 3FG7A 4KEFA 1F7SA 1NPHA 4Z94G 1KCQA 2VIKA 5L6WC 3EGDB 1PCXA 3TU5B 2NUTB 4CBWG 2FF3A 2MP4A 2FH3A 1T3XA 2LJ8A 4PKGG 5IVUA 2FH4A 3L50A 4JD2H 5KYYA 5KYWB 1SVYA 1EQYS 1AK6A 3FFNA 3EGXB 1UDMA 1HQZ1 1D0NA 4S10C 2I2QA 4KEDA 1CFYA 2KVKA 4PKIG 2QTVA 4CBUG 3A5MS 3EFOA 1P8ZG 1WM4A 2W0IA 1T2LA 1VKKA 3A5LS 1C0FS 1VFQA 3CJCG 2D8BA 4CBXG 1V6FA 1WFSA 3DA7A 3FG6A 2MOTA 1T3YA 1D4XG 1JHWA 2MV2A 5KYXA 2XFAA 1Q8GA 2NUPA 1PD0A 1SVRA 1M2VA 1NM1G 2FH2A 5KYUA 1RGIG 1M2OA 5KYNA 5A1MA 1M4JA 1PD1A 2LXXA 2VILA 3CIPG 3EH2A 5FAFA 5KYYB 2FGHA
chains in the Genus database with same CATH topology
5KYXB 4BEX1 2NUPB 2XF1A 3EGDA 1NLVG 1M2VB 1QPVA 1TVJA 3FFKA 2NUTA 1P8XA 1J72A 1TMWA 1CNUA 1DEJS 2FF6G 3EG9A 4PKHB 1ESVS 2HD7A 3EFOB 1Q8XA 1NMDG 1C0GS 1YVNG 5HVKD 1X67A 1COFA 5KYWA 4KEEA 3EGXA 2FH1A 5DD2A 3CI5G 5FAEA 1AK7A 3EG9B 3EH1A 1H1VG 1T44G 1MDUA 1YAGG 4LIZA 1SVQA 2L72A 2LLFA 3DAWB 5KYUB 3A5NS 1AHQA 3Q2BA 3A5OS 1WNJA 5HVKB 2VACA 3CJBG 3FG7A 4KEFA 1F7SA 1NPHA 4Z94G 1KCQA 2VIKA 5L6WC 3EGDB 1PCXA 3TU5B 2NUTB 4CBWG 2FF3A 2MP4A 2FH3A 1T3XA 2LJ8A 4PKGG 5IVUA 2FH4A 3L50A 4JD2H 5KYYA 5KYWB 1SVYA 1EQYS 1AK6A 3FFNA 3EGXB 1UDMA 1HQZ1 1D0NA 4S10C 2I2QA 4KEDA 1CFYA 2KVKA 4PKIG 2QTVA 4CBUG 3A5MS 3EFOA 1P8ZG 1WM4A 2W0IA 1T2LA 1VKKA 3A5LS 1C0FS 1VFQA 3CJCG 2D8BA 4CBXG 1V6FA 1WFSA 3DA7A 3FG6A 2MOTA 1T3YA 1D4XG 1JHWA 2MV2A 5KYXA 2XFAA 1Q8GA 2NUPA 1PD0A 1SVRA 1M2VA 1NM1G 2FH2A 5KYUA 1RGIG 1M2OA 5KYNA 5A1MA 1M4JA 1PD1A 2LXXA 2VILA 3CIPG 3EH2A 5FAFA 5KYYB 2FGHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KYX B;  4BEX 1;  2NUP B;  2XF1 A;  3EGD A;  1NLV G;  1M2V B;  1QPV A;  1TVJ A;  3FFK A;  2NUT A;  1P8X A;  1J72 A;  1TMW A;  1CNU A;  1DEJ S;  2FF6 G;  3EG9 A;  4PKH B;  1ESV S;  2HD7 A;  3EFO B;  1Q8X A;  1NMD G;  1C0G S;  1YVN G;  5HVK D;  1X67 A;  1COF A;  5KYW A;  4KEE A;  3EGX A;  2FH1 A;  5DD2 A;  3CI5 G;  5FAE A;  1AK7 A;  3EG9 B;  3EH1 A;  1H1V G;  1T44 G;  1MDU A;  1YAG G;  4LIZ A;  1SVQ A;  2L72 A;  2LLF A;  3DAW B;  5KYU B;  3A5N S;  1AHQ A;  3Q2B A;  3A5O S;  1WNJ A;  5HVK B;  2VAC A;  3CJB G;  3FG7 A;  4KEF A;  1F7S A;  1NPH A;  4Z94 G;  1KCQ A;  2VIK A;  5L6W C;  3EGD B;  1PCX A;  3TU5 B;  2NUT B;  4CBW G;  2FF3 A;  2MP4 A;  2FH3 A;  1T3X A;  2LJ8 A;  4PKG G;  5IVU A;  2FH4 A;  3L50 A;  4JD2 H;  5KYY A;  5KYW B;  1SVY A;  1EQY S;  1AK6 A;  3FFN A;  3EGX B;  1UDM A;  1HQZ 1;  1D0N A;  4S10 C;  2I2Q A;  4KED A;  1CFY A;  2KVK A;  4PKI G;  2QTV A;  4CBU G;  3A5M S;  3EFO A;  1P8Z G;  1WM4 A;  2W0I A;  1T2L A;  1VKK A;  3A5L S;  1C0F S;  1VFQ A;  3CJC G;  2D8B A;  4CBX G;  1V6F A;  1WFS A;  3FG6 A;  2MOT A;  1T3Y A;  1D4X G;  1JHW A;  2MV2 A;  5KYX A;  2XFA A;  1Q8G A;  2NUP A;  1PD0 A;  1SVR A;  1M2V A;  1NM1 G;  2FH2 A;  5KYU A;  1RGI G;  1M2O A;  5KYN A;  5A1M A;  1M4J A;  1PD1 A;  2LXX A;  2VIL A;  3CIP G;  3EH2 A;  5FAF A;  5KYY B;  2FGH A; 
#chains in the Genus database with same CATH topology
 5KYX B;  4BEX 1;  2NUP B;  2XF1 A;  3EGD A;  1NLV G;  1M2V B;  1QPV A;  1TVJ A;  3FFK A;  2NUT A;  1P8X A;  1J72 A;  1TMW A;  1CNU A;  1DEJ S;  2FF6 G;  3EG9 A;  4PKH B;  1ESV S;  2HD7 A;  3EFO B;  1Q8X A;  1NMD G;  1C0G S;  1YVN G;  5HVK D;  1X67 A;  1COF A;  5KYW A;  4KEE A;  3EGX A;  2FH1 A;  5DD2 A;  3CI5 G;  5FAE A;  1AK7 A;  3EG9 B;  3EH1 A;  1H1V G;  1T44 G;  1MDU A;  1YAG G;  4LIZ A;  1SVQ A;  2L72 A;  2LLF A;  3DAW B;  5KYU B;  3A5N S;  1AHQ A;  3Q2B A;  3A5O S;  1WNJ A;  5HVK B;  2VAC A;  3CJB G;  3FG7 A;  4KEF A;  1F7S A;  1NPH A;  4Z94 G;  1KCQ A;  2VIK A;  5L6W C;  3EGD B;  1PCX A;  3TU5 B;  2NUT B;  4CBW G;  2FF3 A;  2MP4 A;  2FH3 A;  1T3X A;  2LJ8 A;  4PKG G;  5IVU A;  2FH4 A;  3L50 A;  4JD2 H;  5KYY A;  5KYW B;  1SVY A;  1EQY S;  1AK6 A;  3FFN A;  3EGX B;  1UDM A;  1HQZ 1;  1D0N A;  4S10 C;  2I2Q A;  4KED A;  1CFY A;  2KVK A;  4PKI G;  2QTV A;  4CBU G;  3A5M S;  3EFO A;  1P8Z G;  1WM4 A;  2W0I A;  1T2L A;  1VKK A;  3A5L S;  1C0F S;  1VFQ A;  3CJC G;  2D8B A;  4CBX G;  1V6F A;  1WFS A;  3DA7 A;  3FG6 A;  2MOT A;  1T3Y A;  1D4X G;  1JHW A;  2MV2 A;  5KYX A;  2XFA A;  1Q8G A;  2NUP A;  1PD0 A;  1SVR A;  1M2V A;  1NM1 G;  2FH2 A;  5KYU A;  1RGI G;  1M2O A;  5KYN A;  5A1M A;  1M4J A;  1PD1 A;  2LXX A;  2VIL A;  3CIP G;  3EH2 A;  5FAF A;  5KYY B;  2FGH A; 
#chains in the Genus database with same CATH homology
 5KYX B;  4BEX 1;  2NUP B;  2XF1 A;  3EGD A;  1NLV G;  1M2V B;  1QPV A;  1TVJ A;  3FFK A;  2NUT A;  1P8X A;  1J72 A;  1TMW A;  1CNU A;  1DEJ S;  2FF6 G;  3EG9 A;  4PKH B;  1ESV S;  2HD7 A;  3EFO B;  1Q8X A;  1NMD G;  1C0G S;  1YVN G;  5HVK D;  1X67 A;  1COF A;  5KYW A;  4KEE A;  3EGX A;  2FH1 A;  5DD2 A;  3CI5 G;  5FAE A;  1AK7 A;  3EG9 B;  3EH1 A;  1H1V G;  1T44 G;  1MDU A;  1YAG G;  4LIZ A;  1SVQ A;  2L72 A;  2LLF A;  3DAW B;  5KYU B;  3A5N S;  1AHQ A;  3Q2B A;  3A5O S;  1WNJ A;  5HVK B;  2VAC A;  3CJB G;  3FG7 A;  4KEF A;  1F7S A;  1NPH A;  4Z94 G;  1KCQ A;  2VIK A;  5L6W C;  3EGD B;  1PCX A;  3TU5 B;  2NUT B;  4CBW G;  2FF3 A;  2MP4 A;  2FH3 A;  1T3X A;  2LJ8 A;  4PKG G;  5IVU A;  2FH4 A;  3L50 A;  4JD2 H;  5KYY A;  5KYW B;  1SVY A;  1EQY S;  1AK6 A;  3FFN A;  3EGX B;  1UDM A;  1HQZ 1;  1D0N A;  4S10 C;  2I2Q A;  4KED A;  1CFY A;  2KVK A;  4PKI G;  2QTV A;  4CBU G;  3A5M S;  3EFO A;  1P8Z G;  1WM4 A;  2W0I A;  1T2L A;  1VKK A;  3A5L S;  1C0F S;  1VFQ A;  3CJC G;  2D8B A;  4CBX G;  1V6F A;  1WFS A;  3DA7 A;  3FG6 A;  2MOT A;  1T3Y A;  1D4X G;  1JHW A;  2MV2 A;  5KYX A;  2XFA A;  1Q8G A;  2NUP A;  1PD0 A;  1SVR A;  1M2V A;  1NM1 G;  2FH2 A;  5KYU A;  1RGI G;  1M2O A;  5KYN A;  5A1M A;  1M4J A;  1PD1 A;  2LXX A;  2VIL A;  3CIP G;  3EH2 A;  5FAF A;  5KYY B;  2FGH A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...