1G6MA

Nmr solution structure of cbt2
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
62
structure length
62
Chain Sequence
LECHNQQSSQTPTTTGCSGGENNCYKKEWRDNRGYRTERGCGCPSVKKGIGINCCTTDRCNN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords SHORT NEUROTOXIN 1
publication title NMR Solution structure of CBT2
rcsb
total genus 7
structure length 62
sequence length 62
ec nomenclature
pdb deposition date 2000-11-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1g6mA00
1NXBA 3NEQA 1F94A 6EBXA 1JE9A 2CCXA 1S4YA 1FFJA 1CRFA 1FRAA 2CDXA 2MUOA 5EBXA 4BIKB 1HC9A 1I02A 5DU1A 3QB4B 1IDGA 2NBTA 1HAAA 1PLOA 5IMYC 2I9BE 2CRTA 3EBXA 2CRSA 1CODA 1FASA 1QKDA 2VLWA 4OM4A 1DRSA 2H8UA 2QC1A 1BXPA 1H0JA 2H62D 1KC4A 1IQ9A 5IMTD 2LCRA 1HOYA 1M9ZA 2LA1A 1KBSA 3KFDE 1YWHA 2HLQA 2H7ZA 1W6BA 2H7ZB 4FAOE 1LJZA 4BDTB 2J8BA 1HAJA 1IK8A 3NDSA 1KS6A 3PLCA 2GOOC 1CXOA 1ES7B 1NTNA 1LSIA 1TXAA 1NEAA 1KTZB 2N99A 1TFSA 3HH7A 1KL8A 1IDIA 4AEAA 2MJ0A 2HLRA 1F8UB 3LAQU 4IYEA 1CXNA 2ABXA 1ABTA 2OFSA 1UG4A 1G6MA 1TXBA 2X8BB 1ERAA 1KFHA 4QTIU 1NTXA 5DZ5A 4HQPF 1IDHA 4P7UA 1LXHA 1COEA 2QJ9C 1IDLA 1KXIA 1IJCA 2FD6U 2MJ4A 2UWRA 1ERGA 1FSSB 2L03A 4FAOC 2H64B 1NYUA 3EVSC 2QJAC 1CVOA 3FEVA 3NH7A 3VTSA 1KBTA 4EY8B 2PJYC 2H62C 4XJJA 2K3GA 4DO8A 3BT1U 1CDSA 2GOOB 2QJBC 1KU6B 1CDTA 2L5SA 1MAHF 1JGKA 1MR6A 1IKCA 4OM5A 3ERAA 1CTXA 1B41B 3U74U 3KFDI 2MHYA 1QM7A 2MJYA 1KBAA 1NYSA 2BHIA 1CDRA 1FF4A 2MFAA 1L4WA 2CTXA 2BTXA 1TGXA 1HC9B 3U73U 1QKEA 4UY2C 1CREA 1CB9A 1ONJA 1VB0A 4LFTA 1NORA 1RL5A 2H5FA 2JVEA 1FSCA 4ZQYA 2JQPA 1RGJA 1CHVS 1XT3A 1CCQA 2UX2A 5DO6A 1LXGA 1LX5B 2H64C 1CDQA 1V6PA 2ERAA 1BTEA 3BT2U 2PJYB 4RUDA 1JBDA 2MUPA 1ZADA 1REWC
chains in the Genus database with same CATH superfamily
1NXBA 3NEQA 4KSNA 1F94A 6EBXA 1JE9A 2CCXA 1S4YA 1FFJA 1CRFA 1FRAA 2CDXA 2MUOA 5EBXA 4BIKB 1HC9A 1I02A 5DU1A 3QB4B 1IDGA 2NBTA 1HAAA 1PLOA 5IMYC 2I9BE 2CRTA 3EBXA 2CRSA 1CODA 1FASA 1QKDA 2VLWA 4OM4A 1DRSA 2H8UA 2QC1A 1BXPA 1H0JA 2H62D 1KC4A 1IQ9A 5IMTD 2LCRA 1HOYA 1M9ZA 2LA1A 1KBSA 3KFDE 1YWHA 2HLQA 2H7ZA 1W6BA 2H7ZB 4FAOE 1LJZA 4BDTB 2J8BA 1HAJA 1IK8A 3NDSA 1KS6A 3PLCA 2GOOC 1CXOA 1ES7B 1NTNA 1LSIA 1TXAA 1NEAA 1KTZB 2N99A 1TFSA 3HH7A 1KL8A 1IDIA 4AEAA 2MJ0A 2HLRA 1F8UB 3LAQU 4IYEA 1CXNA 2ABXA 1ABTA 2OFSA 1UG4A 1G6MA 1TXBA 2X8BB 1ERAA 1KFHA 4QTIU 1NTXA 5DZ5A 4HQPF 1IDHA 4P7UA 1LXHA 1COEA 2QJ9C 1IDLA 1KXIA 1IJCA 2FD6U 2MJ4A 2UWRA 1ERGA 1FSSB 2L03A 4FAOC 2H64B 1NYUA 3EVSC 2QJAC 1CVOA 3FEVA 3NH7A 3VTSA 1KBTA 4EY8B 2PJYC 2H62C 4XJJA 2K3GA 4DO8A 3BT1U 1CDSA 2GOOB 2QJBC 1KU6B 1CDTA 2L5SA 1MAHF 1JGKA 1MR6A 1IKCA 4OM5A 3ERAA 1CTXA 1B41B 3U74U 3KFDI 2MHYA 1QM7A 2MJYA 1KBAA 1NYSA 2BHIA 1CDRA 1FF4A 2MFAA 1L4WA 2CTXA 2BTXA 1TGXA 1HC9B 3U73U 1QKEA 4UY2C 1CREA 1CB9A 1ONJA 1VB0A 4LFTA 1NORA 1RL5A 2H5FA 2JVEA 1FSCA 4ZQYA 2JQPA 1RGJA 1CHVS 1XT3A 1CCQA 2UX2A 5DO6A 1LXGA 1LX5B 2H64C 1CDQA 1V6PA 2ERAA 1BTEA 3BT2U 2PJYB 4RUDA 1JBDA 2MUPA 1ZADA 1REWC
chains in the Genus database with same CATH topology
1NXBA 3NEQA 4KSNA 1F94A 6EBXA 1JE9A 2CCXA 1S4YA 1FFJA 1CRFA 1FRAA 2CDXA 2MUOA 5EBXA 4BIKB 1HC9A 1I02A 5DU1A 3QB4B 1IDGA 2NBTA 1HAAA 1PLOA 5IMYC 2I9BE 2CRTA 3EBXA 2CRSA 1CODA 1FASA 1QKDA 2VLWA 4OM4A 1DRSA 2H8UA 2QC1A 1BXPA 1H0JA 2H62D 1KC4A 1IQ9A 5IMTD 2LCRA 1HOYA 1M9ZA 2LA1A 1KBSA 3KFDE 1YWHA 2HLQA 2H7ZA 1W6BA 2H7ZB 4FAOE 1LJZA 4BDTB 2J8BA 1HAJA 1IK8A 3NDSA 1KS6A 3PLCA 2GOOC 1CXOA 1ES7B 1NTNA 1LSIA 1TXAA 1NEAA 1KTZB 2N99A 1TFSA 3HH7A 1KL8A 1IDIA 4AEAA 2MJ0A 2HLRA 1F8UB 3LAQU 4IYEA 1CXNA 2ABXA 1ABTA 2OFSA 1UG4A 1G6MA 1TXBA 2X8BB 1ERAA 1KFHA 4QTIU 1NTXA 5DZ5A 4HQPF 1IDHA 4P7UA 1LXHA 1COEA 2QJ9C 1IDLA 1KXIA 1IJCA 2FD6U 2MJ4A 2UWRA 1ERGA 1FSSB 2L03A 4FAOC 2H64B 1NYUA 3EVSC 2QJAC 1CVOA 3FEVA 3NH7A 3VTSA 1KBTA 4EY8B 2PJYC 2H62C 4XJJA 2K3GA 4DO8A 3BT1U 1CDSA 2GOOB 2QJBC 1KU6B 1CDTA 2L5SA 1MAHF 1JGKA 1MR6A 1IKCA 4OM5A 3ERAA 1CTXA 1B41B 3U74U 3KFDI 2MHYA 1QM7A 2MJYA 1KBAA 1NYSA 2BHIA 1CDRA 1FF4A 2MFAA 1L4WA 2CTXA 2BTXA 1TGXA 1HC9B 3U73U 1QKEA 4UY2C 1CREA 1CB9A 1ONJA 1VB0A 4LFTA 1NORA 1RL5A 2H5FA 2JVEA 1FSCA 4ZQYA 2JQPA 1RGJA 1CHVS 1XT3A 1CCQA 2UX2A 5DO6A 1LXGA 1LX5B 2H64C 1CDQA 1V6PA 2ERAA 1BTEA 3BT2U 2PJYB 4RUDA 1JBDA 2MUPA 1ZADA 1REWC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NXB A;  3NEQ A;  1F94 A;  6EBX A;  1JE9 A;  2CCX A;  1S4Y A;  1FFJ A;  1CRF A;  1FRA A;  2CDX A;  2MUO A;  5EBX A;  4BIK B;  1HC9 A;  1I02 A;  5DU1 A;  3QB4 B;  1IDG A;  2NBT A;  1HAA A;  1PLO A;  5IMY C;  2I9B E;  2CRT A;  3EBX A;  2CRS A;  1COD A;  1FAS A;  1QKD A;  2VLW A;  4OM4 A;  1DRS A;  2H8U A;  2QC1 A;  1BXP A;  1H0J A;  2H62 D;  1KC4 A;  1IQ9 A;  5IMT D;  2LCR A;  1HOY A;  1M9Z A;  2LA1 A;  1KBS A;  3KFD E;  1YWH A;  2HLQ A;  2H7Z A;  1W6B A;  2H7Z B;  4FAO E;  1LJZ A;  4BDT B;  2J8B A;  1HAJ A;  1IK8 A;  3NDS A;  1KS6 A;  3PLC A;  2GOO C;  1CXO A;  1ES7 B;  1NTN A;  1LSI A;  1TXA A;  1NEA A;  1KTZ B;  2N99 A;  1TFS A;  3HH7 A;  1KL8 A;  1IDI A;  4AEA A;  2MJ0 A;  2HLR A;  1F8U B;  3LAQ U;  4IYE A;  1CXN A;  2ABX A;  1ABT A;  2OFS A;  1UG4 A;  1G6M A;  1TXB A;  2X8B B;  1ERA A;  1KFH A;  4QTI U;  1NTX A;  5DZ5 A;  4HQP F;  1IDH A;  4P7U A;  1LXH A;  1COE A;  2QJ9 C;  1IDL A;  1KXI A;  1IJC A;  2FD6 U;  2MJ4 A;  2UWR A;  1ERG A;  1FSS B;  2L03 A;  4FAO C;  2H64 B;  1NYU A;  3EVS C;  2QJA C;  1CVO A;  3FEV A;  3NH7 A;  3VTS A;  1KBT A;  4EY8 B;  2PJY C;  2H62 C;  4XJJ A;  2K3G A;  4DO8 A;  3BT1 U;  1CDS A;  2GOO B;  2QJB C;  1KU6 B;  1CDT A;  2L5S A;  1MAH F;  1JGK A;  1MR6 A;  1IKC A;  4OM5 A;  3ERA A;  1CTX A;  1B41 B;  3U74 U;  3KFD I;  2MHY A;  1QM7 A;  2MJY A;  1KBA A;  1NYS A;  2BHI A;  1CDR A;  1FF4 A;  2MFA A;  1L4W A;  2CTX A;  2BTX A;  1TGX A;  1HC9 B;  3U73 U;  1QKE A;  4UY2 C;  1CRE A;  1CB9 A;  1ONJ A;  1VB0 A;  4LFT A;  1NOR A;  1RL5 A;  2H5F A;  2JVE A;  1FSC A;  4ZQY A;  2JQP A;  1RGJ A;  1CHV S;  1XT3 A;  1CCQ A;  2UX2 A;  5DO6 A;  1LXG A;  1LX5 B;  2H64 C;  1CDQ A;  1V6P A;  2ERA A;  1BTE A;  3BT2 U;  2PJY B;  4RUD A;  1JBD A;  2MUP A;  1ZAD A;  1REW C; 
#chains in the Genus database with same CATH topology
 1NXB A;  3NEQ A;  4KSN A;  1F94 A;  6EBX A;  1JE9 A;  2CCX A;  1S4Y A;  1FFJ A;  1CRF A;  1FRA A;  2CDX A;  2MUO A;  5EBX A;  4BIK B;  1HC9 A;  1I02 A;  5DU1 A;  3QB4 B;  1IDG A;  2NBT A;  1HAA A;  1PLO A;  5IMY C;  2I9B E;  2CRT A;  3EBX A;  2CRS A;  1COD A;  1FAS A;  1QKD A;  2VLW A;  4OM4 A;  1DRS A;  2H8U A;  2QC1 A;  1BXP A;  1H0J A;  2H62 D;  1KC4 A;  1IQ9 A;  5IMT D;  2LCR A;  1HOY A;  1M9Z A;  2LA1 A;  1KBS A;  3KFD E;  1YWH A;  2HLQ A;  2H7Z A;  1W6B A;  2H7Z B;  4FAO E;  1LJZ A;  4BDT B;  2J8B A;  1HAJ A;  1IK8 A;  3NDS A;  1KS6 A;  3PLC A;  2GOO C;  1CXO A;  1ES7 B;  1NTN A;  1LSI A;  1TXA A;  1NEA A;  1KTZ B;  2N99 A;  1TFS A;  3HH7 A;  1KL8 A;  1IDI A;  4AEA A;  2MJ0 A;  2HLR A;  1F8U B;  3LAQ U;  4IYE A;  1CXN A;  2ABX A;  1ABT A;  2OFS A;  1UG4 A;  1G6M A;  1TXB A;  2X8B B;  1ERA A;  1KFH A;  4QTI U;  1NTX A;  5DZ5 A;  4HQP F;  1IDH A;  4P7U A;  1LXH A;  1COE A;  2QJ9 C;  1IDL A;  1KXI A;  1IJC A;  2FD6 U;  2MJ4 A;  2UWR A;  1ERG A;  1FSS B;  2L03 A;  4FAO C;  2H64 B;  1NYU A;  3EVS C;  2QJA C;  1CVO A;  3FEV A;  3NH7 A;  3VTS A;  1KBT A;  4EY8 B;  2PJY C;  2H62 C;  4XJJ A;  2K3G A;  4DO8 A;  3BT1 U;  1CDS A;  2GOO B;  2QJB C;  1KU6 B;  1CDT A;  2L5S A;  1MAH F;  1JGK A;  1MR6 A;  1IKC A;  4OM5 A;  3ERA A;  1CTX A;  1B41 B;  3U74 U;  3KFD I;  2MHY A;  1QM7 A;  2MJY A;  1KBA A;  1NYS A;  2BHI A;  1CDR A;  1FF4 A;  2MFA A;  1L4W A;  2CTX A;  2BTX A;  1TGX A;  1HC9 B;  3U73 U;  1QKE A;  4UY2 C;  1CRE A;  1CB9 A;  1ONJ A;  1VB0 A;  4LFT A;  1NOR A;  1RL5 A;  2H5F A;  2JVE A;  1FSC A;  4ZQY A;  2JQP A;  1RGJ A;  1CHV S;  1XT3 A;  1CCQ A;  2UX2 A;  5DO6 A;  1LXG A;  1LX5 B;  2H64 C;  1CDQ A;  1V6P A;  2ERA A;  1BTE A;  3BT2 U;  2PJY B;  4RUD A;  1JBD A;  2MUP A;  1ZAD A;  1REW C; 
#chains in the Genus database with same CATH homology
 1NXB A;  3NEQ A;  4KSN A;  1F94 A;  6EBX A;  1JE9 A;  2CCX A;  1S4Y A;  1FFJ A;  1CRF A;  1FRA A;  2CDX A;  2MUO A;  5EBX A;  4BIK B;  1HC9 A;  1I02 A;  5DU1 A;  3QB4 B;  1IDG A;  2NBT A;  1HAA A;  1PLO A;  5IMY C;  2I9B E;  2CRT A;  3EBX A;  2CRS A;  1COD A;  1FAS A;  1QKD A;  2VLW A;  4OM4 A;  1DRS A;  2H8U A;  2QC1 A;  1BXP A;  1H0J A;  2H62 D;  1KC4 A;  1IQ9 A;  5IMT D;  2LCR A;  1HOY A;  1M9Z A;  2LA1 A;  1KBS A;  3KFD E;  1YWH A;  2HLQ A;  2H7Z A;  1W6B A;  2H7Z B;  4FAO E;  1LJZ A;  4BDT B;  2J8B A;  1HAJ A;  1IK8 A;  3NDS A;  1KS6 A;  3PLC A;  2GOO C;  1CXO A;  1ES7 B;  1NTN A;  1LSI A;  1TXA A;  1NEA A;  1KTZ B;  2N99 A;  1TFS A;  3HH7 A;  1KL8 A;  1IDI A;  4AEA A;  2MJ0 A;  2HLR A;  1F8U B;  3LAQ U;  4IYE A;  1CXN A;  2ABX A;  1ABT A;  2OFS A;  1UG4 A;  1G6M A;  1TXB A;  2X8B B;  1ERA A;  1KFH A;  4QTI U;  1NTX A;  5DZ5 A;  4HQP F;  1IDH A;  4P7U A;  1LXH A;  1COE A;  2QJ9 C;  1IDL A;  1KXI A;  1IJC A;  2FD6 U;  2MJ4 A;  2UWR A;  1ERG A;  1FSS B;  2L03 A;  4FAO C;  2H64 B;  1NYU A;  3EVS C;  2QJA C;  1CVO A;  3FEV A;  3NH7 A;  3VTS A;  1KBT A;  4EY8 B;  2PJY C;  2H62 C;  4XJJ A;  2K3G A;  4DO8 A;  3BT1 U;  1CDS A;  2GOO B;  2QJB C;  1KU6 B;  1CDT A;  2L5S A;  1MAH F;  1JGK A;  1MR6 A;  1IKC A;  4OM5 A;  3ERA A;  1CTX A;  1B41 B;  3U74 U;  3KFD I;  2MHY A;  1QM7 A;  2MJY A;  1KBA A;  1NYS A;  2BHI A;  1CDR A;  1FF4 A;  2MFA A;  1L4W A;  2CTX A;  2BTX A;  1TGX A;  1HC9 B;  3U73 U;  1QKE A;  4UY2 C;  1CRE A;  1CB9 A;  1ONJ A;  1VB0 A;  4LFT A;  1NOR A;  1RL5 A;  2H5F A;  2JVE A;  1FSC A;  4ZQY A;  2JQP A;  1RGJ A;  1CHV S;  1XT3 A;  1CCQ A;  2UX2 A;  5DO6 A;  1LXG A;  1LX5 B;  2H64 C;  1CDQ A;  1V6P A;  2ERA A;  1BTE A;  3BT2 U;  2PJY B;  4RUD A;  1JBD A;  2MUP A;  1ZAD A;  1REW C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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