1HHNA

Calreticulin p-domain
Total Genus 5
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
101
structure length
101
Chain Sequence
SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Molecular chaperone
molecule keywords CALRETICULIN
publication title NMR Structure of the Calreticulin P-Domain
pubmed doi rcsb
source organism Rattus norvegicus
total genus 5
structure length 101
sequence length 101
ec nomenclature
pdb deposition date 2000-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.250.10 Mainly Beta Ribbon Calnexin lumenal domain, non-globular proline-rich hairpin domain Calreticulin/calnexin, P domain 1hhnA00
1HHNA 3RG0A 1K9CA 1JHNA
chains in the Genus database with same CATH superfamily
1HHNA 3RG0A 1K9CA 1JHNA
chains in the Genus database with same CATH topology
1HHNA 3RG0A 1K9CA 1JHNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HHN A;  3RG0 A;  1K9C A;  1JHN A; 
#chains in the Genus database with same CATH topology
 1HHN A;  3RG0 A;  1K9C A;  1JHN A; 
#chains in the Genus database with same CATH homology
 1HHN A;  3RG0 A;  1K9C A;  1JHN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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