1HKYA

Solution structure of a pan module from eimeria tenella
Total Genus 7
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
7
sequence length
86
structure length
86
Chain Sequence
DYKDDDDKVKLTCYQNGVSFTGGKAISEAKAASSQACQELCEKDAKCRFFTLASGKCSLFADDAALRPTKSDGAVSGNKRCILLED
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Adhesin
molecule keywords MICRONEME PROTEIN 5 PRECURSOR
publication title Solution Structure of a Pan Module from the Apicomplexan Parasite Eimeria Tenella
pubmed doi rcsb
source organism Eimeria tenella
total genus 7
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2002-10-03
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.50.4.10 Alpha Beta 3-Layer(bba) Sandwich Hepatocyte Growth Factor Hepatocyte Growth Factor 1hkyA00
1I8NA 5CT2A 2HGFA 2QJ4A 4Z09A 2YIOA 3HMRA 3HMSA 1Z40A 4UAOA 5EOKA 4Z0EA 4Z0FA 2LL3A 4A5TS 5CT3A 1HKYA 3MKPA 4Z0DA 2YILA 2QJ2A 2Z8VA 1GP9A 1GMOA 4R1BA 5COEA 5CS9A 3ZLEA 3HN4A 2LL4M 1GMNA 2F83A 2Q8BA 5CS3A 1W81A 4IUAA 3SP8A 3ZWZA 3SRJA 3SRIA 2Z8WA 5CS1A 5CT1A 4R1CA 2J8JA 3HMTA 5CP9A 5EODA 4APMA 1W8KA 4R19A 1BHTA 4DURA 2X2ZA 1YXEA 2Y8RA 5CSQA 5I25A 4APLA 2YIPA 4UV6A 1NK1A 4R1AA 2K13X 2Q8AA 2J8LA 5CS5A
chains in the Genus database with same CATH superfamily
1I8NA 5CT2A 2HGFA 2QJ4A 4YIVA 2KL5A 2YIOA 3HMRA 3HMSA 4Z09A 1Z40A 4UAOA 5EOKA 4Z0EA 4Z0FA 2LL3A 4A5TS 5CT3A 1HKYA 3MKPA 4Z0DA 2YILA 2QJ2A 2Z8VA 1GP9A 1GMOA 4R1BA 5COEA 5CS9A 4YIZA 3ZLEA 3HN4A 2LL4M 1GMNA 2F83A 2Q8BA 5CS3A 1W81A 4IUAA 3SP8A 3ZWZA 3SRJA 3SRIA 2Z8WA 5CS1A 5CT1A 4R1CA 2J8JA 3HMTA 5CP9A 5EODA 4APMA 1W8KA 4R19A 1BHTA 4DURA 2X2ZA 1YXEA 2Y8RA 5CSQA 5I25A 4APLA 2YIPA 4UV6A 1NK1A 4R1AA 2K13X 2Q8AA 2J8LA 5CS5A
chains in the Genus database with same CATH topology
1I8NA 5CT2A 2HGFA 2QJ4A 4YIVA 2KL5A 2YIOA 3HMRA 3HMSA 4Z09A 1Z40A 4UAOA 5EOKA 4Z0EA 4Z0FA 2LL3A 4A5TS 5CT3A 1HKYA 3MKPA 4Z0DA 2YILA 2QJ2A 2Z8VA 1GP9A 1GMOA 4R1BA 5COEA 5CS9A 4YIZA 3ZLEA 3HN4A 2LL4M 1GMNA 2F83A 2Q8BA 5CS3A 1W81A 4IUAA 3SP8A 3ZWZA 3SRJA 3SRIA 2Z8WA 5CS1A 5CT1A 4R1CA 2J8JA 3HMTA 5CP9A 5EODA 4APMA 1W8KA 4R19A 1BHTA 4DURA 2X2ZA 1YXEA 2Y8RA 5CSQA 5I25A 4APLA 2YIPA 4UV6A 1NK1A 4R1AA 2K13X 2Q8AA 2J8LA 5CS5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1I8N A;  5CT2 A;  2HGF A;  2QJ4 A;  4Z09 A;  2YIO A;  3HMR A;  3HMS A;  1Z40 A;  4UAO A;  5EOK A;  4Z0E A;  4Z0F A;  2LL3 A;  4A5T S;  5CT3 A;  1HKY A;  3MKP A;  4Z0D A;  2YIL A;  2QJ2 A;  2Z8V A;  1GP9 A;  1GMO A;  4R1B A;  5COE A;  5CS9 A;  3ZLE A;  3HN4 A;  2LL4 M;  1GMN A;  2F83 A;  2Q8B A;  5CS3 A;  1W81 A;  4IUA A;  3SP8 A;  3ZWZ A;  3SRJ A;  3SRI A;  2Z8W A;  5CS1 A;  5CT1 A;  4R1C A;  2J8J A;  3HMT A;  5CP9 A;  5EOD A;  4APM A;  1W8K A;  4R19 A;  1BHT A;  4DUR A;  2X2Z A;  1YXE A;  2Y8R A;  5CSQ A;  5I25 A;  4APL A;  2YIP A;  4UV6 A;  1NK1 A;  4R1A A;  2K13 X;  2Q8A A;  2J8L A;  5CS5 A; 
#chains in the Genus database with same CATH topology
 1I8N A;  5CT2 A;  2HGF A;  2QJ4 A;  4YIV A;  2KL5 A;  2YIO A;  3HMR A;  3HMS A;  4Z09 A;  1Z40 A;  4UAO A;  5EOK A;  4Z0E A;  4Z0F A;  2LL3 A;  4A5T S;  5CT3 A;  1HKY A;  3MKP A;  4Z0D A;  2YIL A;  2QJ2 A;  2Z8V A;  1GP9 A;  1GMO A;  4R1B A;  5COE A;  5CS9 A;  4YIZ A;  3ZLE A;  3HN4 A;  2LL4 M;  1GMN A;  2F83 A;  2Q8B A;  5CS3 A;  1W81 A;  4IUA A;  3SP8 A;  3ZWZ A;  3SRJ A;  3SRI A;  2Z8W A;  5CS1 A;  5CT1 A;  4R1C A;  2J8J A;  3HMT A;  5CP9 A;  5EOD A;  4APM A;  1W8K A;  4R19 A;  1BHT A;  4DUR A;  2X2Z A;  1YXE A;  2Y8R A;  5CSQ A;  5I25 A;  4APL A;  2YIP A;  4UV6 A;  1NK1 A;  4R1A A;  2K13 X;  2Q8A A;  2J8L A;  5CS5 A; 
#chains in the Genus database with same CATH homology
 1I8N A;  5CT2 A;  2HGF A;  2QJ4 A;  4YIV A;  2KL5 A;  2YIO A;  3HMR A;  3HMS A;  4Z09 A;  1Z40 A;  4UAO A;  5EOK A;  4Z0E A;  4Z0F A;  2LL3 A;  4A5T S;  5CT3 A;  1HKY A;  3MKP A;  4Z0D A;  2YIL A;  2QJ2 A;  2Z8V A;  1GP9 A;  1GMO A;  4R1B A;  5COE A;  5CS9 A;  4YIZ A;  3ZLE A;  3HN4 A;  2LL4 M;  1GMN A;  2F83 A;  2Q8B A;  5CS3 A;  1W81 A;  4IUA A;  3SP8 A;  3ZWZ A;  3SRJ A;  3SRI A;  2Z8W A;  5CS1 A;  5CT1 A;  4R1C A;  2J8J A;  3HMT A;  5CP9 A;  5EOD A;  4APM A;  1W8K A;  4R19 A;  1BHT A;  4DUR A;  2X2Z A;  1YXE A;  2Y8R A;  5CSQ A;  5I25 A;  4APL A;  2YIP A;  4UV6 A;  1NK1 A;  4R1A A;  2K13 X;  2Q8A A;  2J8L A;  5CS5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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