1IDHA

The nmr solution structure of the complex formed between alpha-bungarotoxin and an 18mer cognate peptide
Total Genus 5
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
74
structure length
74
Chain Sequence
IVCHTTATSPISAVTCPPGENLCYRKMWCDAFCSSRGKVVELGCAATCPSKKPYEEVTCCSTDKCNPHPKQRPG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords ALPHA-BUNGAROTOXIN
publication title The solution structure of the complex formed between alpha-bungarotoxin and an 18-mer cognate peptide derived from the alpha 1 subunit of the nicotinic acetylcholine receptor from Torpedo californica.
pubmed doi rcsb
source organism Torpedo californica
total genus 5
structure length 74
sequence length 74
ec nomenclature
pdb deposition date 2001-04-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1idhA00
6EBXA 1KL8A 1CDSA 1KBSA 1NYSA 1HC9A 1IDGA 1NYUA 1FASA 3EBXA 1LSIA 1ZADA 2H7ZA 1XT3A 2HLQA 1REWC 1FSSB 4AEAA 1CRFA 1COEA 1QM7A 3BT2U 3QB4B 2FD6U 3ERAA 3LAQU 2QJ9C 1CXNA 2H62C 3KFDE 1IDIA 3U73U 1IK8A 1NORA 1ONJA 1CREA 1IQ9A 2QJAC 1BXPA 1KTZB 3VTSA 3PLCA 2PJYC 2CRTA 1DRSA 1KBTA 1MR6A 1TXAA 2BHIA 1IDHA 4ZQYA 1CTXA 3BT1U 3FEVA 2MJ0A 1PLOA 1M9ZA 1ERAA 1L4WA 2H62D 1FF4A 4XJJA 4BDTB 1IDLA 4QTIU 1KU6B 2J8BA 2ABXA 2CCXA 1ERGA 1KC4A 2HLRA 1NTXA 1W6BA 2CRSA 2MJYA 1CXOA 1VB0A 1KFHA 1BTEA 1RL5A 1MAHF 3NEQA 2H5FA 2GOOC 1S4YA 3U74U 2L03A 2ERAA 1JGKA 4BIKB 2CDXA 1TGXA 2VLWA 2JQPA 1HOYA 1B41B 1F94A 2MUOA 1KBAA 1UG4A 1KS6A 1YWHA 2MJ4A 5DU1A 1CCQA 2H64C 1ES7B 1TXBA 1CDQA 2MUPA 2OFSA 2PJYB 2L5SA 5IMYC 2X8BB 1LJZA 1CB9A 1QKDA 4UY2C 5DO6A 1JE9A 1FFJA 5EBXA 1IJCA 1CDTA 3NDSA 5IMTD 3KFDI 2UX2A 4FAOC 2LCRA 2K3GA 2BTXA 1ABTA 2H8UA 2MHYA 1KXIA 3EVSC 1JBDA 1I02A 1TFSA 4RUDA 1HAJA 1CHVS 1CVOA 2N99A 4OM5A 1HC9B 1LXHA 4DO8A 1QKEA 2I9BE 2QC1A 2LA1A 3HH7A 2H7ZB 3NH7A 1FSCA 4HQPF 1HAAA 1F8UB 2GOOB 4P7UA 4FAOE 1LXGA 1NTNA 1CODA 4LFTA 1LX5B 2QJBC 4EY8B 1CDRA 1RGJA 1G6MA 2CTXA 2UWRA 4OM4A 1IKCA 1FRAA 2JVEA 2MFAA 5DZ5A 1NEAA 1V6PA 1H0JA 2NBTA 4IYEA 1NXBA 2H64B
chains in the Genus database with same CATH superfamily
6EBXA 1KL8A 1CDSA 1KBSA 1NYSA 1HC9A 1IDGA 1NYUA 1FASA 3EBXA 1LSIA 1ZADA 2H7ZA 1XT3A 2HLQA 1REWC 1FSSB 4AEAA 1CRFA 1COEA 1QM7A 3BT2U 3QB4B 2FD6U 3ERAA 3LAQU 2QJ9C 1CXNA 2H62C 3KFDE 1IDIA 3U73U 1IK8A 1NORA 1ONJA 1CREA 1IQ9A 2QJAC 1BXPA 1KTZB 3VTSA 3PLCA 2PJYC 2CRTA 1DRSA 1KBTA 1MR6A 1TXAA 2BHIA 1IDHA 4ZQYA 1CTXA 3BT1U 3FEVA 2MJ0A 1PLOA 1M9ZA 1ERAA 1L4WA 2H62D 1FF4A 4XJJA 4BDTB 1IDLA 4QTIU 1KU6B 2J8BA 2ABXA 4KSNA 2CCXA 1ERGA 1KC4A 2HLRA 1NTXA 1W6BA 2CRSA 2MJYA 1CXOA 1VB0A 1KFHA 1BTEA 1RL5A 1MAHF 3NEQA 2H5FA 2GOOC 1S4YA 3U74U 2L03A 2ERAA 1JGKA 4BIKB 2CDXA 1TGXA 2VLWA 2JQPA 1HOYA 1B41B 1F94A 2MUOA 1KBAA 1UG4A 1KS6A 1YWHA 2MJ4A 5DU1A 1CCQA 2H64C 1ES7B 1TXBA 1CDQA 2MUPA 2OFSA 2PJYB 2L5SA 5IMYC 2X8BB 1LJZA 1CB9A 1QKDA 4UY2C 5DO6A 1JE9A 1FFJA 5EBXA 1IJCA 1CDTA 3NDSA 5IMTD 3KFDI 2UX2A 4FAOC 2LCRA 2K3GA 2BTXA 1ABTA 2H8UA 2MHYA 1KXIA 3EVSC 1JBDA 1I02A 1TFSA 4RUDA 1HAJA 1CHVS 1CVOA 2N99A 4OM5A 1HC9B 1LXHA 4DO8A 1QKEA 2I9BE 2QC1A 2LA1A 3HH7A 2H7ZB 3NH7A 1FSCA 4HQPF 1HAAA 1F8UB 2GOOB 4P7UA 4FAOE 1LXGA 1NTNA 1CODA 4LFTA 1LX5B 2QJBC 4EY8B 1CDRA 1RGJA 1G6MA 2CTXA 2UWRA 4OM4A 1IKCA 1FRAA 2JVEA 2MFAA 5DZ5A 1NEAA 1V6PA 1H0JA 2NBTA 4IYEA 1NXBA 2H64B
chains in the Genus database with same CATH topology
6EBXA 1KL8A 1CDSA 1KBSA 1NYSA 1HC9A 1IDGA 1NYUA 1FASA 3EBXA 1LSIA 1ZADA 2H7ZA 1XT3A 2HLQA 1REWC 1FSSB 4AEAA 1CRFA 1COEA 1QM7A 3BT2U 3QB4B 2FD6U 3ERAA 3LAQU 2QJ9C 1CXNA 2H62C 3KFDE 1IDIA 3U73U 1IK8A 1NORA 1ONJA 1CREA 1IQ9A 2QJAC 1BXPA 1KTZB 3VTSA 3PLCA 2PJYC 2CRTA 1DRSA 1KBTA 1MR6A 1TXAA 2BHIA 1IDHA 4ZQYA 1CTXA 3BT1U 3FEVA 2MJ0A 1PLOA 1M9ZA 1ERAA 1L4WA 2H62D 1FF4A 4XJJA 4BDTB 1IDLA 4QTIU 1KU6B 2J8BA 2ABXA 4KSNA 2CCXA 1ERGA 1KC4A 2HLRA 1NTXA 1W6BA 2CRSA 2MJYA 1CXOA 1VB0A 1KFHA 1BTEA 1RL5A 1MAHF 3NEQA 2H5FA 2GOOC 1S4YA 3U74U 2L03A 2ERAA 1JGKA 4BIKB 2CDXA 1TGXA 2VLWA 2JQPA 1HOYA 1B41B 1F94A 2MUOA 1KBAA 1UG4A 1KS6A 1YWHA 2MJ4A 5DU1A 1CCQA 2H64C 1ES7B 1TXBA 1CDQA 2MUPA 2OFSA 2PJYB 2L5SA 5IMYC 2X8BB 1LJZA 1CB9A 1QKDA 4UY2C 5DO6A 1JE9A 1FFJA 5EBXA 1IJCA 1CDTA 3NDSA 5IMTD 3KFDI 2UX2A 4FAOC 2LCRA 2K3GA 2BTXA 1ABTA 2H8UA 2MHYA 1KXIA 3EVSC 1JBDA 1I02A 1TFSA 4RUDA 1HAJA 1CHVS 1CVOA 2N99A 4OM5A 1HC9B 1LXHA 4DO8A 1QKEA 2I9BE 2QC1A 2LA1A 3HH7A 2H7ZB 3NH7A 1FSCA 4HQPF 1HAAA 1F8UB 2GOOB 4P7UA 4FAOE 1LXGA 1NTNA 1CODA 4LFTA 1LX5B 2QJBC 4EY8B 1CDRA 1RGJA 1G6MA 2CTXA 2UWRA 4OM4A 1IKCA 1FRAA 2JVEA 2MFAA 5DZ5A 1NEAA 1V6PA 1H0JA 2NBTA 4IYEA 1NXBA 2H64B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 6EBX A;  1KL8 A;  1CDS A;  1KBS A;  1NYS A;  1HC9 A;  1IDG A;  1NYU A;  1FAS A;  3EBX A;  1LSI A;  1ZAD A;  2H7Z A;  1XT3 A;  2HLQ A;  1REW C;  1FSS B;  4AEA A;  1CRF A;  1COE A;  1QM7 A;  3BT2 U;  3QB4 B;  2FD6 U;  3ERA A;  3LAQ U;  2QJ9 C;  1CXN A;  2H62 C;  3KFD E;  1IDI A;  3U73 U;  1IK8 A;  1NOR A;  1ONJ A;  1CRE A;  1IQ9 A;  2QJA C;  1BXP A;  1KTZ B;  3VTS A;  3PLC A;  2PJY C;  2CRT A;  1DRS A;  1KBT A;  1MR6 A;  1TXA A;  2BHI A;  1IDH A;  4ZQY A;  1CTX A;  3BT1 U;  3FEV A;  2MJ0 A;  1PLO A;  1M9Z A;  1ERA A;  1L4W A;  2H62 D;  1FF4 A;  4XJJ A;  4BDT B;  1IDL A;  4QTI U;  1KU6 B;  2J8B A;  2ABX A;  2CCX A;  1ERG A;  1KC4 A;  2HLR A;  1NTX A;  1W6B A;  2CRS A;  2MJY A;  1CXO A;  1VB0 A;  1KFH A;  1BTE A;  1RL5 A;  1MAH F;  3NEQ A;  2H5F A;  2GOO C;  1S4Y A;  3U74 U;  2L03 A;  2ERA A;  1JGK A;  4BIK B;  2CDX A;  1TGX A;  2VLW A;  2JQP A;  1HOY A;  1B41 B;  1F94 A;  2MUO A;  1KBA A;  1UG4 A;  1KS6 A;  1YWH A;  2MJ4 A;  5DU1 A;  1CCQ A;  2H64 C;  1ES7 B;  1TXB A;  1CDQ A;  2MUP A;  2OFS A;  2PJY B;  2L5S A;  5IMY C;  2X8B B;  1LJZ A;  1CB9 A;  1QKD A;  4UY2 C;  5DO6 A;  1JE9 A;  1FFJ A;  5EBX A;  1IJC A;  1CDT A;  3NDS A;  5IMT D;  3KFD I;  2UX2 A;  4FAO C;  2LCR A;  2K3G A;  2BTX A;  1ABT A;  2H8U A;  2MHY A;  1KXI A;  3EVS C;  1JBD A;  1I02 A;  1TFS A;  4RUD A;  1HAJ A;  1CHV S;  1CVO A;  2N99 A;  4OM5 A;  1HC9 B;  1LXH A;  4DO8 A;  1QKE A;  2I9B E;  2QC1 A;  2LA1 A;  3HH7 A;  2H7Z B;  3NH7 A;  1FSC A;  4HQP F;  1HAA A;  1F8U B;  2GOO B;  4P7U A;  4FAO E;  1LXG A;  1NTN A;  1COD A;  4LFT A;  1LX5 B;  2QJB C;  4EY8 B;  1CDR A;  1RGJ A;  1G6M A;  2CTX A;  2UWR A;  4OM4 A;  1IKC A;  1FRA A;  2JVE A;  2MFA A;  5DZ5 A;  1NEA A;  1V6P A;  1H0J A;  2NBT A;  4IYE A;  1NXB A;  2H64 B; 
#chains in the Genus database with same CATH topology
 6EBX A;  1KL8 A;  1CDS A;  1KBS A;  1NYS A;  1HC9 A;  1IDG A;  1NYU A;  1FAS A;  3EBX A;  1LSI A;  1ZAD A;  2H7Z A;  1XT3 A;  2HLQ A;  1REW C;  1FSS B;  4AEA A;  1CRF A;  1COE A;  1QM7 A;  3BT2 U;  3QB4 B;  2FD6 U;  3ERA A;  3LAQ U;  2QJ9 C;  1CXN A;  2H62 C;  3KFD E;  1IDI A;  3U73 U;  1IK8 A;  1NOR A;  1ONJ A;  1CRE A;  1IQ9 A;  2QJA C;  1BXP A;  1KTZ B;  3VTS A;  3PLC A;  2PJY C;  2CRT A;  1DRS A;  1KBT A;  1MR6 A;  1TXA A;  2BHI A;  1IDH A;  4ZQY A;  1CTX A;  3BT1 U;  3FEV A;  2MJ0 A;  1PLO A;  1M9Z A;  1ERA A;  1L4W A;  2H62 D;  1FF4 A;  4XJJ A;  4BDT B;  1IDL A;  4QTI U;  1KU6 B;  2J8B A;  2ABX A;  4KSN A;  2CCX A;  1ERG A;  1KC4 A;  2HLR A;  1NTX A;  1W6B A;  2CRS A;  2MJY A;  1CXO A;  1VB0 A;  1KFH A;  1BTE A;  1RL5 A;  1MAH F;  3NEQ A;  2H5F A;  2GOO C;  1S4Y A;  3U74 U;  2L03 A;  2ERA A;  1JGK A;  4BIK B;  2CDX A;  1TGX A;  2VLW A;  2JQP A;  1HOY A;  1B41 B;  1F94 A;  2MUO A;  1KBA A;  1UG4 A;  1KS6 A;  1YWH A;  2MJ4 A;  5DU1 A;  1CCQ A;  2H64 C;  1ES7 B;  1TXB A;  1CDQ A;  2MUP A;  2OFS A;  2PJY B;  2L5S A;  5IMY C;  2X8B B;  1LJZ A;  1CB9 A;  1QKD A;  4UY2 C;  5DO6 A;  1JE9 A;  1FFJ A;  5EBX A;  1IJC A;  1CDT A;  3NDS A;  5IMT D;  3KFD I;  2UX2 A;  4FAO C;  2LCR A;  2K3G A;  2BTX A;  1ABT A;  2H8U A;  2MHY A;  1KXI A;  3EVS C;  1JBD A;  1I02 A;  1TFS A;  4RUD A;  1HAJ A;  1CHV S;  1CVO A;  2N99 A;  4OM5 A;  1HC9 B;  1LXH A;  4DO8 A;  1QKE A;  2I9B E;  2QC1 A;  2LA1 A;  3HH7 A;  2H7Z B;  3NH7 A;  1FSC A;  4HQP F;  1HAA A;  1F8U B;  2GOO B;  4P7U A;  4FAO E;  1LXG A;  1NTN A;  1COD A;  4LFT A;  1LX5 B;  2QJB C;  4EY8 B;  1CDR A;  1RGJ A;  1G6M A;  2CTX A;  2UWR A;  4OM4 A;  1IKC A;  1FRA A;  2JVE A;  2MFA A;  5DZ5 A;  1NEA A;  1V6P A;  1H0J A;  2NBT A;  4IYE A;  1NXB A;  2H64 B; 
#chains in the Genus database with same CATH homology
 6EBX A;  1KL8 A;  1CDS A;  1KBS A;  1NYS A;  1HC9 A;  1IDG A;  1NYU A;  1FAS A;  3EBX A;  1LSI A;  1ZAD A;  2H7Z A;  1XT3 A;  2HLQ A;  1REW C;  1FSS B;  4AEA A;  1CRF A;  1COE A;  1QM7 A;  3BT2 U;  3QB4 B;  2FD6 U;  3ERA A;  3LAQ U;  2QJ9 C;  1CXN A;  2H62 C;  3KFD E;  1IDI A;  3U73 U;  1IK8 A;  1NOR A;  1ONJ A;  1CRE A;  1IQ9 A;  2QJA C;  1BXP A;  1KTZ B;  3VTS A;  3PLC A;  2PJY C;  2CRT A;  1DRS A;  1KBT A;  1MR6 A;  1TXA A;  2BHI A;  1IDH A;  4ZQY A;  1CTX A;  3BT1 U;  3FEV A;  2MJ0 A;  1PLO A;  1M9Z A;  1ERA A;  1L4W A;  2H62 D;  1FF4 A;  4XJJ A;  4BDT B;  1IDL A;  4QTI U;  1KU6 B;  2J8B A;  2ABX A;  4KSN A;  2CCX A;  1ERG A;  1KC4 A;  2HLR A;  1NTX A;  1W6B A;  2CRS A;  2MJY A;  1CXO A;  1VB0 A;  1KFH A;  1BTE A;  1RL5 A;  1MAH F;  3NEQ A;  2H5F A;  2GOO C;  1S4Y A;  3U74 U;  2L03 A;  2ERA A;  1JGK A;  4BIK B;  2CDX A;  1TGX A;  2VLW A;  2JQP A;  1HOY A;  1B41 B;  1F94 A;  2MUO A;  1KBA A;  1UG4 A;  1KS6 A;  1YWH A;  2MJ4 A;  5DU1 A;  1CCQ A;  2H64 C;  1ES7 B;  1TXB A;  1CDQ A;  2MUP A;  2OFS A;  2PJY B;  2L5S A;  5IMY C;  2X8B B;  1LJZ A;  1CB9 A;  1QKD A;  4UY2 C;  5DO6 A;  1JE9 A;  1FFJ A;  5EBX A;  1IJC A;  1CDT A;  3NDS A;  5IMT D;  3KFD I;  2UX2 A;  4FAO C;  2LCR A;  2K3G A;  2BTX A;  1ABT A;  2H8U A;  2MHY A;  1KXI A;  3EVS C;  1JBD A;  1I02 A;  1TFS A;  4RUD A;  1HAJ A;  1CHV S;  1CVO A;  2N99 A;  4OM5 A;  1HC9 B;  1LXH A;  4DO8 A;  1QKE A;  2I9B E;  2QC1 A;  2LA1 A;  3HH7 A;  2H7Z B;  3NH7 A;  1FSC A;  4HQP F;  1HAA A;  1F8U B;  2GOO B;  4P7U A;  4FAO E;  1LXG A;  1NTN A;  1COD A;  4LFT A;  1LX5 B;  2QJB C;  4EY8 B;  1CDR A;  1RGJ A;  1G6M A;  2CTX A;  2UWR A;  4OM4 A;  1IKC A;  1FRA A;  2JVE A;  2MFA A;  5DZ5 A;  1NEA A;  1V6P A;  1H0J A;  2NBT A;  4IYE A;  1NXB A;  2H64 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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