1J6TB

Complex of enzyme iiamtl and the histidine-containing phosphocarrier protein hpr from escherichia coli nmr, restrained regularized mean structure
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
85
structure length
85
Chain Sequence
MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords PTS SYSTEM, MANNITOL-SPECIFIC IIABC COMPONENT
publication title Solution Structure of the Phosphoryl Transfer Complex between the Cytoplasmic A Domain of the Mannitol Transporter IImannitol and HPr of the Escherichia coli Phosphotransferase System
pubmed doi rcsb
source organism Escherichia coli
total genus 19
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 2002-08-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00381 PTS-HPr PTS HPr component phosphorylation site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1340.10 Alpha Beta 2-Layer Sandwich Histidine-containing Protein; Chain: A; HPr-like 1j6tB00
3OQND 1Y50A 3OQMD 3LE1A 3LNWA 2RLZA 1KKMH 2NZUL 3OQOD 1PTFA 2XDFC 3LFGA 1Y4YA 1QFRA 1PFHA 2HIDA 5T17A 1MU4A 1ZVVJ 1HDNA 3EZAB 2LRKD 3LE5A 2LRLD 1VRCC 1MO1A 3EZEB 2NZVL 3EZBB 3IHSA 1CM2A 5T1NA 2OENL 1CM3A 2HPRA 1OPDA 1J6TB 1SPHA 2JELP 1PCHA 1Y51A 2AK7A 3CCDA 1RZRL 1POHA 1FU0A 3LE3A 1GGRB 4XWJB 1TXEA 5T1OA 1JEMA 2FEPS 1MO1B 1KKLH 1K1CA 1KA5A 1QR5A
chains in the Genus database with same CATH superfamily
3OQND 1Y50A 3OQMD 3LE1A 3LNWA 2RLZA 1KKMH 2NZUL 3OQOD 1PTFA 2XDFC 3LFGA 1Y4YA 1QFRA 1PFHA 2HIDA 5T17A 1MU4A 1ZVVJ 1HDNA 3EZAB 2LRKD 3LE5A 2LRLD 1VRCC 1MO1A 3EZEB 2NZVL 3EZBB 3IHSA 1CM2A 5T1NA 2OENL 1CM3A 2HPRA 1OPDA 1J6TB 1SPHA 2JELP 1PCHA 1Y51A 2AK7A 3CCDA 1RZRL 1POHA 1FU0A 3LE3A 1GGRB 4XWJB 1TXEA 1J5YA 5T1OA 1JEMA 2FEPS 1MO1B 1KKLH 1K1CA 1KA5A 1QR5A
chains in the Genus database with same CATH topology
3OQND 1Y50A 3OQMD 3LE1A 3LNWA 2RLZA 1KKMH 2NZUL 3OQOD 1PTFA 2XDFC 3LFGA 1Y4YA 1QFRA 1PFHA 2HIDA 5T17A 1MU4A 1ZVVJ 1HDNA 3EZAB 2LRKD 3LE5A 2LRLD 1VRCC 1MO1A 3EZEB 2NZVL 3EZBB 3IHSA 1CM2A 5T1NA 2OENL 1CM3A 2HPRA 1OPDA 1J6TB 1SPHA 2JELP 1PCHA 1Y51A 2AK7A 3CCDA 1RZRL 1POHA 1FU0A 3LE3A 1GGRB 4XWJB 1TXEA 5T1OA 1JEMA 2FEPS 1MO1B 1KKLH 1K1CA 1KA5A 1QR5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OQN D;  1Y50 A;  3OQM D;  3LE1 A;  3LNW A;  2RLZ A;  1KKM H;  2NZU L;  3OQO D;  1PTF A;  2XDF C;  3LFG A;  1Y4Y A;  1QFR A;  1PFH A;  2HID A;  5T17 A;  1MU4 A;  1ZVV J;  1HDN A;  3EZA B;  2LRK D;  3LE5 A;  2LRL D;  1VRC C;  1MO1 A;  3EZE B;  2NZV L;  3EZB B;  3IHS A;  1CM2 A;  5T1N A;  2OEN L;  1CM3 A;  2HPR A;  1OPD A;  1J6T B;  1SPH A;  2JEL P;  1PCH A;  1Y51 A;  2AK7 A;  3CCD A;  1RZR L;  1POH A;  1FU0 A;  3LE3 A;  1GGR B;  4XWJ B;  1TXE A;  5T1O A;  1JEM A;  2FEP S;  1MO1 B;  1KKL H;  1K1C A;  1KA5 A;  1QR5 A; 
#chains in the Genus database with same CATH topology
 3OQN D;  1Y50 A;  3OQM D;  3LE1 A;  3LNW A;  2RLZ A;  1KKM H;  2NZU L;  3OQO D;  1PTF A;  2XDF C;  3LFG A;  1Y4Y A;  1QFR A;  1PFH A;  2HID A;  5T17 A;  1MU4 A;  1ZVV J;  1HDN A;  3EZA B;  2LRK D;  3LE5 A;  2LRL D;  1VRC C;  1MO1 A;  3EZE B;  2NZV L;  3EZB B;  3IHS A;  1CM2 A;  5T1N A;  2OEN L;  1CM3 A;  2HPR A;  1OPD A;  1J6T B;  1SPH A;  2JEL P;  1PCH A;  1Y51 A;  2AK7 A;  3CCD A;  1RZR L;  1POH A;  1FU0 A;  3LE3 A;  1GGR B;  4XWJ B;  1TXE A;  1J5Y A;  5T1O A;  1JEM A;  2FEP S;  1MO1 B;  1KKL H;  1K1C A;  1KA5 A;  1QR5 A; 
#chains in the Genus database with same CATH homology
 3OQN D;  1Y50 A;  3OQM D;  3LE1 A;  3LNW A;  2RLZ A;  1KKM H;  2NZU L;  3OQO D;  1PTF A;  2XDF C;  3LFG A;  1Y4Y A;  1QFR A;  1PFH A;  2HID A;  5T17 A;  1MU4 A;  1ZVV J;  1HDN A;  3EZA B;  2LRK D;  3LE5 A;  2LRL D;  1VRC C;  1MO1 A;  3EZE B;  2NZV L;  3EZB B;  3IHS A;  1CM2 A;  5T1N A;  2OEN L;  1CM3 A;  2HPR A;  1OPD A;  1J6T B;  1SPH A;  2JEL P;  1PCH A;  1Y51 A;  2AK7 A;  3CCD A;  1RZR L;  1POH A;  1FU0 A;  3LE3 A;  1GGR B;  4XWJ B;  1TXE A;  5T1O A;  1JEM A;  2FEP S;  1MO1 B;  1KKL H;  1K1C A;  1KA5 A;  1QR5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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