1SPHA

Refined structures of the active s83c and impaired s46d hprs: evidence that phosphorylation does not require a backbone conformational transition
Total Genus 25
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
87
structure length
87
Chain Sequence
AQKTFKVTADSGIHARPATVLVQTASKYDADVNLEYNGKTVNLKDIMGVMSLGIAKGAEITISASGADENDALNALEETMKSEGLGE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Phosphotransferase
molecule keywords HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR
publication title Refined structures of the active Ser83-->Cys and impaired Ser46-->Asp histidine-containing phosphocarrier proteins.
pubmed doi rcsb
source organism Bacillus subtilis
total genus 25
structure length 87
sequence length 87
chains with identical sequence B
ec nomenclature
pdb deposition date 1994-11-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00381 PTS-HPr PTS HPr component phosphorylation site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1340.10 Alpha Beta 2-Layer Sandwich Histidine-containing Protein; Chain: A; HPr-like 1sphA00
1MO1B 1QR5A 1KA5A 1MO1A 3EZAB 2JELP 1FU0A 2LRKD 1KKMH 1Y51A 1SPHA 1VRCC 2HIDA 2LRLD 2NZVL 3LE5A 1QFRA 2FEPS 3EZBB 3LE3A 1RZRL 3OQND 3LFGA 5T1OA 1CM2A 1HDNA 1KKLH 1CM3A 3IHSA 1PTFA 1POHA 3CCDA 1JEMA 1PFHA 2NZUL 1MU4A 2XDFC 3LE1A 1J6TB 5T17A 1Y50A 2AK7A 2RLZA 3OQOD 2HPRA 3LNWA 1GGRB 1PCHA 3OQMD 1K1CA 1Y4YA 1ZVVJ 3EZEB 4XWJB 2OENL 1TXEA 5T1NA 1OPDA
chains in the Genus database with same CATH superfamily
1MO1B 1QR5A 1KA5A 1MO1A 3EZAB 2JELP 1FU0A 2LRKD 1KKMH 1Y51A 1SPHA 1VRCC 2HIDA 2LRLD 2NZVL 3LE5A 1QFRA 2FEPS 3EZBB 3LE3A 1RZRL 3OQND 3LFGA 5T1OA 1CM2A 1HDNA 1KKLH 1CM3A 3IHSA 1PTFA 1J5YA 1POHA 3CCDA 1JEMA 1PFHA 2NZUL 1MU4A 2XDFC 3LE1A 1J6TB 5T17A 1Y50A 2AK7A 2RLZA 3OQOD 2HPRA 3LNWA 1GGRB 1PCHA 3OQMD 1K1CA 1Y4YA 1ZVVJ 3EZEB 4XWJB 2OENL 1TXEA 5T1NA 1OPDA
chains in the Genus database with same CATH topology
1MO1B 1QR5A 1KA5A 1MO1A 3EZAB 2JELP 1FU0A 2LRKD 1KKMH 1Y51A 1SPHA 1VRCC 2HIDA 2LRLD 2NZVL 3LE5A 1QFRA 2FEPS 3EZBB 3LE3A 1RZRL 3OQND 3LFGA 5T1OA 1CM2A 1HDNA 1KKLH 1CM3A 3IHSA 1PTFA 1POHA 3CCDA 1JEMA 1PFHA 2NZUL 1MU4A 2XDFC 3LE1A 1J6TB 5T17A 1Y50A 2AK7A 2RLZA 3OQOD 2HPRA 3LNWA 1GGRB 1PCHA 3OQMD 1K1CA 1Y4YA 1ZVVJ 3EZEB 4XWJB 2OENL 1TXEA 5T1NA 1OPDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MO1 B;  1QR5 A;  1KA5 A;  1MO1 A;  3EZA B;  2JEL P;  1FU0 A;  2LRK D;  1KKM H;  1Y51 A;  1SPH A;  1VRC C;  2HID A;  2LRL D;  2NZV L;  3LE5 A;  1QFR A;  2FEP S;  3EZB B;  3LE3 A;  1RZR L;  3OQN D;  3LFG A;  5T1O A;  1CM2 A;  1HDN A;  1KKL H;  1CM3 A;  3IHS A;  1PTF A;  1POH A;  3CCD A;  1JEM A;  1PFH A;  2NZU L;  1MU4 A;  2XDF C;  3LE1 A;  1J6T B;  5T17 A;  1Y50 A;  2AK7 A;  2RLZ A;  3OQO D;  2HPR A;  3LNW A;  1GGR B;  1PCH A;  3OQM D;  1K1C A;  1Y4Y A;  1ZVV J;  3EZE B;  4XWJ B;  2OEN L;  1TXE A;  5T1N A;  1OPD A; 
#chains in the Genus database with same CATH topology
 1MO1 B;  1QR5 A;  1KA5 A;  1MO1 A;  3EZA B;  2JEL P;  1FU0 A;  2LRK D;  1KKM H;  1Y51 A;  1SPH A;  1VRC C;  2HID A;  2LRL D;  2NZV L;  3LE5 A;  1QFR A;  2FEP S;  3EZB B;  3LE3 A;  1RZR L;  3OQN D;  3LFG A;  5T1O A;  1CM2 A;  1HDN A;  1KKL H;  1CM3 A;  3IHS A;  1PTF A;  1J5Y A;  1POH A;  3CCD A;  1JEM A;  1PFH A;  2NZU L;  1MU4 A;  2XDF C;  3LE1 A;  1J6T B;  5T17 A;  1Y50 A;  2AK7 A;  2RLZ A;  3OQO D;  2HPR A;  3LNW A;  1GGR B;  1PCH A;  3OQM D;  1K1C A;  1Y4Y A;  1ZVV J;  3EZE B;  4XWJ B;  2OEN L;  1TXE A;  5T1N A;  1OPD A; 
#chains in the Genus database with same CATH homology
 1MO1 B;  1QR5 A;  1KA5 A;  1MO1 A;  3EZA B;  2JEL P;  1FU0 A;  2LRK D;  1KKM H;  1Y51 A;  1SPH A;  1VRC C;  2HID A;  2LRL D;  2NZV L;  3LE5 A;  1QFR A;  2FEP S;  3EZB B;  3LE3 A;  1RZR L;  3OQN D;  3LFG A;  5T1O A;  1CM2 A;  1HDN A;  1KKL H;  1CM3 A;  3IHS A;  1PTF A;  1POH A;  3CCD A;  1JEM A;  1PFH A;  2NZU L;  1MU4 A;  2XDF C;  3LE1 A;  1J6T B;  5T17 A;  1Y50 A;  2AK7 A;  2RLZ A;  3OQO D;  2HPR A;  3LNW A;  1GGR B;  1PCH A;  3OQM D;  1K1C A;  1Y4Y A;  1ZVV J;  3EZE B;  4XWJ B;  2OEN L;  1TXE A;  5T1N A;  1OPD A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...