2AE4A

Glutaryl 7-aminocephalosporanic acid acylase: mutational study of activation mechanism
Total Genus 53
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
160
structure length
160
Chain Sequence
PQAPIAAYKPRSNEILWDGYGVPHIYGVDAPSAFYGYGWAQARSHGDNILRLYGEARGKGAEYWGPDYEQTTVWLLTNGVPERAQQWYAQQSPDFRANLDAFAAGINAYAQQNPDDISPDVRQVLPVSGADVVAHAHRLMNFLYVASPGRTLGQGDPPDL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase
molecule keywords Glutaryl 7-Aminocephalosporanic Acid Acylase
publication title Insight into autoproteolytic activation from the structure of cephalosporin acylase: a protein with two proteolytic chemistries.
pubmed doi rcsb
source organism Pseudomonas sp.
total genus 53
structure length 160
sequence length 160
ec nomenclature ec 3.5.1.93: Glutaryl-7-aminocephalosporanic-acid acylase.
pdb deposition date 2005-07-21
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.439.10 Mainly Alpha Orthogonal Bundle Penicillin Amidohydrolase; domain 1 Penicillin Amidohydrolase, domain 1 2ae4A00
1K5QA 1E3AA 1GM8A 1KECA 4WKUA 2WYDA 1OR0A 1AI5A 1GM7A 1JVZA 1GHDA 2AE5A 1AI4A 1GKFA 3SRBA 1AI6A 1PNLA 4M1JA 1AJPA 3L94A 4PEMA 1GK9A 4E57A 2WYCA 2AE3A 3ML0A 4PELA 4YFAA 1PNKA 3SRAA 1PNMA 1GK0A 2ADVA 1H2GA 1K5SA 1AJNA 1CP9A 1FXVA 4WKTA 3JTRA 1AI7A 3L91A 4HSTA 4E56A 1FXHA 1FM2A 4WKSA 4YF9A 3JTQA 2WYEA 2WYBA 4HSRA 3S8RA 1GM9A 1GK1A 1K7DA 1KEHA 1JX9A 4E55A 4BTHA 4YFBA 4K2GA 4K2FA 3SRCA 1JW0A 1AJQA 4WKVA 3K3WA 2AE4A
chains in the Genus database with same CATH superfamily
1K5QA 1E3AA 1GM8A 1KECA 4BWCA 4WKUA 2WYDA 1OR0A 1AI5A 1GM7A 1JVZA 1GHDA 2AE5A 1AI4A 1GKFA 3SRBA 1AI6A 1PNLA 4M1JA 1AJPA 3L94A 3S8RA 3FGTA 4PEMA 1GK9A 4E57A 2WYCA 2AE3A 3ML0A 4PELA 4YFAA 1PNKA 3SRAA 1PNMA 1GK0A 2ADVA 1H2GA 1K5SA 1AJNA 1CP9A 1FXVA 4WKTA 3JTRA 1AI7A 3L91A 4HSTA 4E56A 1FXHA 1FM2A 3FGRA 4WKSA 3JTQA 2WYEA 2WYBA 4HSRA 4YF9A 1GM9A 1GK1A 1K7DA 1KEHA 1JX9A 4E55A 4BTHA 4YFBA 4K2GA 4K2FA 3SRCA 1JW0A 1AJQA 4WKVA 3K3WA 2AE4A
chains in the Genus database with same CATH topology
1K5QA 1E3AA 1GM8A 1KECA 4WKUA 2WYDA 1OR0A 1AI5A 1GM7A 1JVZA 1GHDA 2AE5A 1AI4A 1GKFA 3SRBA 1AI6A 1PNLA 4M1JA 1AJPA 3L94A 4PEMA 1GK9A 4E57A 2WYCA 2AE3A 3ML0A 4PELA 4YFAA 1PNKA 3SRAA 1PNMA 1GK0A 2ADVA 1H2GA 1K5SA 1AJNA 1CP9A 1FXVA 4WKTA 3JTRA 1AI7A 3L91A 4HSTA 4E56A 1FXHA 1FM2A 4WKSA 4YF9A 3JTQA 2WYEA 2WYBA 4HSRA 3S8RA 1GM9A 1GK1A 1K7DA 1KEHA 1JX9A 4E55A 4BTHA 4YFBA 4K2GA 4K2FA 3SRCA 1JW0A 1AJQA 4WKVA 3K3WA 2AE4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K5Q A;  1E3A A;  1GM8 A;  1KEC A;  4WKU A;  2WYD A;  1OR0 A;  1AI5 A;  1GM7 A;  1JVZ A;  1GHD A;  2AE5 A;  1AI4 A;  1GKF A;  3SRB A;  1AI6 A;  1PNL A;  4M1J A;  1AJP A;  3L94 A;  4PEM A;  1GK9 A;  4E57 A;  2WYC A;  2AE3 A;  3ML0 A;  4PEL A;  4YFA A;  1PNK A;  3SRA A;  1PNM A;  1GK0 A;  2ADV A;  1H2G A;  1K5S A;  1AJN A;  1CP9 A;  1FXV A;  4WKT A;  3JTR A;  1AI7 A;  3L91 A;  4HST A;  4E56 A;  1FXH A;  1FM2 A;  4WKS A;  4YF9 A;  3JTQ A;  2WYE A;  2WYB A;  4HSR A;  3S8R A;  1GM9 A;  1GK1 A;  1K7D A;  1KEH A;  1JX9 A;  4E55 A;  4BTH A;  4YFB A;  4K2G A;  4K2F A;  3SRC A;  1JW0 A;  1AJQ A;  4WKV A;  3K3W A;  2AE4 A; 
#chains in the Genus database with same CATH topology
 1K5Q A;  1E3A A;  1GM8 A;  1KEC A;  4BWC A;  4WKU A;  2WYD A;  1OR0 A;  1AI5 A;  1GM7 A;  1JVZ A;  1GHD A;  2AE5 A;  1AI4 A;  1GKF A;  3SRB A;  1AI6 A;  1PNL A;  4M1J A;  1AJP A;  3L94 A;  3S8R A;  3FGT A;  4PEM A;  1GK9 A;  4E57 A;  2WYC A;  2AE3 A;  3ML0 A;  4PEL A;  4YFA A;  1PNK A;  3SRA A;  1PNM A;  1GK0 A;  2ADV A;  1H2G A;  1K5S A;  1AJN A;  1CP9 A;  1FXV A;  4WKT A;  3JTR A;  1AI7 A;  3L91 A;  4HST A;  4E56 A;  1FXH A;  1FM2 A;  3FGR A;  4WKS A;  3JTQ A;  2WYE A;  2WYB A;  4HSR A;  4YF9 A;  1GM9 A;  1GK1 A;  1K7D A;  1KEH A;  1JX9 A;  4E55 A;  4BTH A;  4YFB A;  4K2G A;  4K2F A;  3SRC A;  1JW0 A;  1AJQ A;  4WKV A;  3K3W A;  2AE4 A; 
#chains in the Genus database with same CATH homology
 1K5Q A;  1E3A A;  1GM8 A;  1KEC A;  4WKU A;  2WYD A;  1OR0 A;  1AI5 A;  1GM7 A;  1JVZ A;  1GHD A;  2AE5 A;  1AI4 A;  1GKF A;  3SRB A;  1AI6 A;  1PNL A;  4M1J A;  1AJP A;  3L94 A;  4PEM A;  1GK9 A;  4E57 A;  2WYC A;  2AE3 A;  3ML0 A;  4PEL A;  4YFA A;  1PNK A;  3SRA A;  1PNM A;  1GK0 A;  2ADV A;  1H2G A;  1K5S A;  1AJN A;  1CP9 A;  1FXV A;  4WKT A;  3JTR A;  1AI7 A;  3L91 A;  4HST A;  4E56 A;  1FXH A;  1FM2 A;  4WKS A;  4YF9 A;  3JTQ A;  2WYE A;  2WYB A;  4HSR A;  3S8R A;  1GM9 A;  1GK1 A;  1K7D A;  1KEH A;  1JX9 A;  4E55 A;  4BTH A;  4YFB A;  4K2G A;  4K2F A;  3SRC A;  1JW0 A;  1AJQ A;  4WKV A;  3K3W A;  2AE4 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...