2AE5A

Glutaryl 7-aminocephalosporanic acid acylase: mutational study of activation mechanism
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
159
structure length
159
Chain Sequence
PQAPIAAYKPRSNEILWDGYGVPHIYGVDAPSAFYGYGWAQARSHGDNILRLYGEARGKGAEYWGPDYEQTTVWLLTNGVPERAQQWYAQQSPDFRANLDAFAAGINAYAQQNPDDISPDVRQVLPVSGADVVAHAHRLMNFLYVASPGRTLGEGDPPD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Glutaryl 7-Aminocephalosporanic Acid Acylase
publication title Insight into autoproteolytic activation from the structure of cephalosporin acylase: a protein with two proteolytic chemistries.
pubmed doi rcsb
source organism Pseudomonas sp.
total genus 49
structure length 159
sequence length 159
ec nomenclature ec 3.5.1.93: Glutaryl-7-aminocephalosporanic-acid acylase.
pdb deposition date 2005-07-21
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.439.10 Mainly Alpha Orthogonal Bundle Penicillin Amidohydrolase; domain 1 Penicillin Amidohydrolase, domain 1 2ae5A00
1GM8A 1PNKA 1GKFA 3L94A 3ML0A 1AJQA 1K5QA 4BTHA 4K2FA 3JTRA 1JX9A 1KECA 1AJPA 1JW0A 1JVZA 1GM7A 1AI7A 1AI6A 1GM9A 1PNMA 3JTQA 3SRBA 1K5SA 1AJNA 2ADVA 4E57A 1GK0A 1PNLA 2WYEA 4HSRA 4WKSA 3K3WA 4WKTA 4YF9A 1CP9A 4YFBA 4WKUA 2WYDA 4K2GA 4M1JA 1AI5A 4E55A 1GK1A 1AI4A 1E3AA 2AE3A 4WKVA 1FM2A 1KEHA 1K7DA 3SRCA 4YFAA 3S8RA 2WYBA 3L91A 2AE4A 1GHDA 3SRAA 4HSTA 1FXVA 1GK9A 4PEMA 2WYCA 2AE5A 4PELA 1OR0A 4E56A 1H2GA 1FXHA
chains in the Genus database with same CATH superfamily
1GM8A 1PNKA 3FGTA 1GKFA 3L94A 3ML0A 1AJQA 1K5QA 4BTHA 4K2FA 3JTRA 1JX9A 1KECA 1AJPA 1JW0A 1JVZA 1GM7A 1AI7A 1AI6A 1GM9A 1PNMA 3JTQA 3SRBA 1K5SA 1AJNA 2ADVA 4E57A 1GK0A 1PNLA 2WYEA 4HSRA 4WKSA 3K3WA 4WKTA 4YF9A 1CP9A 4YFBA 4WKUA 2WYDA 4K2GA 4M1JA 1AI5A 4E55A 1GK1A 1AI4A 1E3AA 2AE3A 4WKVA 1FM2A 1KEHA 1K7DA 3SRCA 4YFAA 3S8RA 2WYBA 3L91A 3FGRA 2AE4A 4BWCA 1GHDA 3SRAA 4HSTA 1FXVA 1GK9A 4PEMA 2WYCA 2AE5A 4PELA 1OR0A 4E56A 1H2GA 1FXHA
chains in the Genus database with same CATH topology
1GM8A 1PNKA 1GKFA 3L94A 3ML0A 1AJQA 1K5QA 4BTHA 4K2FA 3JTRA 1JX9A 1KECA 1AJPA 1JW0A 1JVZA 1GM7A 1AI7A 1AI6A 1GM9A 1PNMA 3JTQA 3SRBA 1K5SA 1AJNA 2ADVA 4E57A 1GK0A 1PNLA 2WYEA 4HSRA 4WKSA 3K3WA 4WKTA 4YF9A 1CP9A 4YFBA 4WKUA 2WYDA 4K2GA 4M1JA 1AI5A 4E55A 1GK1A 1AI4A 1E3AA 2AE3A 4WKVA 1FM2A 1KEHA 1K7DA 3SRCA 4YFAA 3S8RA 2WYBA 3L91A 2AE4A 1GHDA 3SRAA 4HSTA 1FXVA 1GK9A 4PEMA 2WYCA 2AE5A 4PELA 1OR0A 4E56A 1H2GA 1FXHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1GM8 A;  1PNK A;  1GKF A;  3L94 A;  3ML0 A;  1AJQ A;  1K5Q A;  4BTH A;  4K2F A;  3JTR A;  1JX9 A;  1KEC A;  1AJP A;  1JW0 A;  1JVZ A;  1GM7 A;  1AI7 A;  1AI6 A;  1GM9 A;  1PNM A;  3JTQ A;  3SRB A;  1K5S A;  1AJN A;  2ADV A;  4E57 A;  1GK0 A;  1PNL A;  2WYE A;  4HSR A;  4WKS A;  3K3W A;  4WKT A;  4YF9 A;  1CP9 A;  4YFB A;  4WKU A;  2WYD A;  4K2G A;  4M1J A;  1AI5 A;  4E55 A;  1GK1 A;  1AI4 A;  1E3A A;  2AE3 A;  4WKV A;  1FM2 A;  1KEH A;  1K7D A;  3SRC A;  4YFA A;  3S8R A;  2WYB A;  3L91 A;  2AE4 A;  1GHD A;  3SRA A;  4HST A;  1FXV A;  1GK9 A;  4PEM A;  2WYC A;  2AE5 A;  4PEL A;  1OR0 A;  4E56 A;  1H2G A;  1FXH A; 
#chains in the Genus database with same CATH topology
 1GM8 A;  1PNK A;  3FGT A;  1GKF A;  3L94 A;  3ML0 A;  1AJQ A;  1K5Q A;  4BTH A;  4K2F A;  3JTR A;  1JX9 A;  1KEC A;  1AJP A;  1JW0 A;  1JVZ A;  1GM7 A;  1AI7 A;  1AI6 A;  1GM9 A;  1PNM A;  3JTQ A;  3SRB A;  1K5S A;  1AJN A;  2ADV A;  4E57 A;  1GK0 A;  1PNL A;  2WYE A;  4HSR A;  4WKS A;  3K3W A;  4WKT A;  4YF9 A;  1CP9 A;  4YFB A;  4WKU A;  2WYD A;  4K2G A;  4M1J A;  1AI5 A;  4E55 A;  1GK1 A;  1AI4 A;  1E3A A;  2AE3 A;  4WKV A;  1FM2 A;  1KEH A;  1K7D A;  3SRC A;  4YFA A;  3S8R A;  2WYB A;  3L91 A;  3FGR A;  2AE4 A;  4BWC A;  1GHD A;  3SRA A;  4HST A;  1FXV A;  1GK9 A;  4PEM A;  2WYC A;  2AE5 A;  4PEL A;  1OR0 A;  4E56 A;  1H2G A;  1FXH A; 
#chains in the Genus database with same CATH homology
 1GM8 A;  1PNK A;  1GKF A;  3L94 A;  3ML0 A;  1AJQ A;  1K5Q A;  4BTH A;  4K2F A;  3JTR A;  1JX9 A;  1KEC A;  1AJP A;  1JW0 A;  1JVZ A;  1GM7 A;  1AI7 A;  1AI6 A;  1GM9 A;  1PNM A;  3JTQ A;  3SRB A;  1K5S A;  1AJN A;  2ADV A;  4E57 A;  1GK0 A;  1PNL A;  2WYE A;  4HSR A;  4WKS A;  3K3W A;  4WKT A;  4YF9 A;  1CP9 A;  4YFB A;  4WKU A;  2WYD A;  4K2G A;  4M1J A;  1AI5 A;  4E55 A;  1GK1 A;  1AI4 A;  1E3A A;  2AE3 A;  4WKV A;  1FM2 A;  1KEH A;  1K7D A;  3SRC A;  4YFA A;  3S8R A;  2WYB A;  3L91 A;  2AE4 A;  1GHD A;  3SRA A;  4HST A;  1FXV A;  1GK9 A;  4PEM A;  2WYC A;  2AE5 A;  4PEL A;  1OR0 A;  4E56 A;  1H2G A;  1FXH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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