2AFFA

The solution structure of the ki67fha/hnifk(226-269)3p complex
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
98
structure length
98
Chain Sequence
PTRRLVTIKRSGVDGPHFPLSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGSVIDEPVRLKHGDVITIIDRSFRYENE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell cycle
molecule keywords Antigen KI-67
publication title Sequential phosphorylation and multisite interactions characterize specific target recognition by the FHA domain of Ki67.
pubmed doi rcsb
source organism Homo sapiens
total genus 12
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2005-07-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00498 FHA FHA domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.200.20 Mainly Beta Sandwich Tumour Suppressor Smad4 Tumour Suppressor Smad4 2affA00
1K2NA 3MDBA 1J4QA 1FHRA 3VA1A 1MZKA 3HUEA 1LGPA 3I6UA 1WV3A 3UMZA 1WLNA 2LC1A 1QU5A 1GXCA 2A0TA 3ELSA 5E50A 5DJOA 4D9VA 4G2SA 3UV0A 1G6GA 2FEZA 1K3NA 3I0MA 3UNMA 1K2MA 1LGQA 1R21A 3UNNA 1J4OA 3HX1A 3ELVA 4EGXA 1J4PA 2KB3A 2PIEA 4JONA 2W3OA 3FM8A 2JPEA 2FF4A 3I0NA 2JQLA 2JKDA 2JQJA 3VPYA 1J4LA 1K3JA 2EH0A 2KB4A 4QCJA 1DMZA 5A8IA 1G3GA 2XT9B 3VA4A 3PO8A 3POAA 1UHTA 3I6WA 2KFUA 1UJXA 1FHQA 1YJMA 2G1LA 3OUNA 1YJ5C 2BRFA 3KT9A 2JQIA 2KKLA 2AFFA 3UOTA 3HUFA 4H87A 1J4KA 3UN0A 4EJQA 1K3QA 3GQSA 2CSWA 4A0EA
chains in the Genus database with same CATH superfamily
1K2NA 3MDBA 4HAOA 1J4QA 2XXSA 1ZOQA 5EJHA 1FHRA 3VA1A 3V8MA 1MZKA 3HUEA 1LGPA 3V8NA 3I6UA 1SUWA 1WV3A 3UMZA 4JIWD 2Q5FA 4KU0D 1DEVA 1WLNA 1MR1A 2LC1A 1QU5A 1GXCA 2A0TA 3ELSA 5E50A 3DSHA 3S40A 5DJOA 4V24A 3VZCA 4D9VA 1KHXA 5EJIA 4G2SA 3UV0A 1G6GA 3V8PA 2FEZA 5EJGA 2I2DA 5DHUA 5JEKA 1K3NA 4WERA 2JGRA 3I0MA 3UNMA 1G88A 2I2FA 5BVIA 3VZDA 3V7YA 3V8QA 1K2MA 5DHSA 5JEMA 1LGQA 1R21A 3UNNA 1J4OA 3AFOA 3VZBA 3HX1A 5DHTA 3ELVA 4EGXA 4A4YA 1U7FA 2I2AA 1J4PA 3T5PA 2KB3A 2PIEA 5JEJA 1Z0SA 2W3OA 4JONA 3FM8A 1U7VA 1Y3IA 1U0TA 2QVLA 1YGSA 2JPEA 2QV7A 4WRRA 5JERA 2FF4A 3I0NA 2JQLA 1Y3HA 2I1WA 3PFNA 3V7WA 3GMJA 2JKDA 2JQJA 3VPYA 1J4LA 2I29A 5EJFA 4L02A 1K3JA 1Z0UA 1U7FB 2EH0A 2KB4A 4QCJA 1DMZA 5JEOA 5A8IA 3DITA 1J2FA 1QWTA 2XT9B 1G3GA 1DD1A 1U7VB 2AN1A 2BONA 3VA4A 3PO8A 3POAA 4R9PA 1UHTA 5JELA 5C4VA 3I6WA 2I2CA 5DHPA 2KFUA 1UJXA 1FHQA 1YJMA 2G1LA 3OUNA 4JIVD 3V7UA 1Z0ZA 1YJ5C 2BRFA 3KT9A 5DHQA 1U0RA 2JQIA 1KHUA 2KKLA 2AFFA 3UOTA 3V80A 5DHRA 3HUFA 3V8RA 1MJSA 4H87A 1J4KA 2I2BA 3UN0A 4EJQA 1MK2A 4DY6A 1K3QA 3GQSA 3A77A 2CSWA 2P1RA 4A0EA 1YT5A
chains in the Genus database with same CATH topology
1K2NA 3MDBA 1J4QA 2XXSA 1ZOQA 1FHRA 3VA1A 1MZKA 3HUEA 1LGPA 3I6UA 1WV3A 3UMZA 4JIWD 4KU0D 1DEVA 1WLNA 1MR1A 2LC1A 1QU5A 1GXCA 2A0TA 3ELSA 5E50A 3DSHA 3S40A 5DJOA 4V24A 3VZCA 4D9VA 1KHXA 4G2SA 3UV0A 1G6GA 2FEZA 5JEKA 1K3NA 4WERA 2JGRA 3I0MA 3UNMA 1G88A 5BVIA 3VZDA 1K2MA 5JEMA 1LGQA 1R21A 3UNNA 1J4OA 3VZBA 3HX1A 3ELVA 4EGXA 4A4YA 1U7FA 1J4PA 3T5PA 2KB3A 2PIEA 5JEJA 4JONA 2W3OA 3FM8A 1U7VA 2QVLA 1YGSA 2JPEA 2QV7A 4WRRA 5JERA 2FF4A 3I0NA 2JQLA 3GMJA 2JKDA 2JQJA 3VPYA 1J4LA 4L02A 1K3JA 1U7FB 2EH0A 2KB4A 4QCJA 1DMZA 5JEOA 5A8IA 3DITA 1J2FA 1QWTA 2XT9B 1G3GA 1DD1A 1U7VB 2BONA 3VA4A 3PO8A 3POAA 4R9PA 1UHTA 5JELA 5C4VA 3I6WA 2KFUA 1UJXA 1FHQA 1YJMA 2G1LA 3OUNA 4JIVD 1YJ5C 2BRFA 3KT9A 2JQIA 1KHUA 2KKLA 2AFFA 3UOTA 3HUFA 1MJSA 4H87A 1J4KA 3UN0A 4EJQA 1MK2A 1K3QA 3GQSA 3A77A 2CSWA 2P1RA 4A0EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K2N A;  3MDB A;  1J4Q A;  1FHR A;  3VA1 A;  1MZK A;  3HUE A;  1LGP A;  3I6U A;  1WV3 A;  3UMZ A;  1WLN A;  2LC1 A;  1QU5 A;  1GXC A;  2A0T A;  3ELS A;  5E50 A;  5DJO A;  4D9V A;  4G2S A;  3UV0 A;  1G6G A;  2FEZ A;  1K3N A;  3I0M A;  3UNM A;  1K2M A;  1LGQ A;  1R21 A;  3UNN A;  1J4O A;  3HX1 A;  3ELV A;  4EGX A;  1J4P A;  2KB3 A;  2PIE A;  4JON A;  2W3O A;  3FM8 A;  2JPE A;  2FF4 A;  3I0N A;  2JQL A;  2JKD A;  2JQJ A;  3VPY A;  1J4L A;  1K3J A;  2EH0 A;  2KB4 A;  4QCJ A;  1DMZ A;  5A8I A;  1G3G A;  2XT9 B;  3VA4 A;  3PO8 A;  3POA A;  1UHT A;  3I6W A;  2KFU A;  1UJX A;  1FHQ A;  1YJM A;  2G1L A;  3OUN A;  1YJ5 C;  2BRF A;  3KT9 A;  2JQI A;  2KKL A;  2AFF A;  3UOT A;  3HUF A;  4H87 A;  1J4K A;  3UN0 A;  4EJQ A;  1K3Q A;  3GQS A;  2CSW A;  4A0E A; 
#chains in the Genus database with same CATH topology
 1K2N A;  3MDB A;  4HAO A;  1J4Q A;  2XXS A;  1ZOQ A;  5EJH A;  1FHR A;  3VA1 A;  3V8M A;  1MZK A;  3HUE A;  1LGP A;  3V8N A;  3I6U A;  1SUW A;  1WV3 A;  3UMZ A;  4JIW D;  2Q5F A;  4KU0 D;  1DEV A;  1WLN A;  1MR1 A;  2LC1 A;  1QU5 A;  1GXC A;  2A0T A;  3ELS A;  5E50 A;  3DSH A;  3S40 A;  5DJO A;  4V24 A;  3VZC A;  4D9V A;  1KHX A;  5EJI A;  4G2S A;  3UV0 A;  1G6G A;  3V8P A;  2FEZ A;  5EJG A;  2I2D A;  5DHU A;  5JEK A;  1K3N A;  4WER A;  2JGR A;  3I0M A;  3UNM A;  1G88 A;  2I2F A;  5BVI A;  3VZD A;  3V7Y A;  3V8Q A;  1K2M A;  5DHS A;  5JEM A;  1LGQ A;  1R21 A;  3UNN A;  1J4O A;  3AFO A;  3VZB A;  3HX1 A;  5DHT A;  3ELV A;  4EGX A;  4A4Y A;  1U7F A;  2I2A A;  1J4P A;  3T5P A;  2KB3 A;  2PIE A;  5JEJ A;  1Z0S A;  2W3O A;  4JON A;  3FM8 A;  1U7V A;  1Y3I A;  1U0T A;  2QVL A;  1YGS A;  2JPE A;  2QV7 A;  4WRR A;  5JER A;  2FF4 A;  3I0N A;  2JQL A;  1Y3H A;  2I1W A;  3PFN A;  3V7W A;  3GMJ A;  2JKD A;  2JQJ A;  3VPY A;  1J4L A;  2I29 A;  5EJF A;  4L02 A;  1K3J A;  1Z0U A;  1U7F B;  2EH0 A;  2KB4 A;  4QCJ A;  1DMZ A;  5JEO A;  5A8I A;  3DIT A;  1J2F A;  1QWT A;  2XT9 B;  1G3G A;  1DD1 A;  1U7V B;  2AN1 A;  2BON A;  3VA4 A;  3PO8 A;  3POA A;  4R9P A;  1UHT A;  5JEL A;  5C4V A;  3I6W A;  2I2C A;  5DHP A;  2KFU A;  1UJX A;  1FHQ A;  1YJM A;  2G1L A;  3OUN A;  4JIV D;  3V7U A;  1Z0Z A;  1YJ5 C;  2BRF A;  3KT9 A;  5DHQ A;  1U0R A;  2JQI A;  1KHU A;  2KKL A;  2AFF A;  3UOT A;  3V80 A;  5DHR A;  3HUF A;  3V8R A;  1MJS A;  4H87 A;  1J4K A;  2I2B A;  3UN0 A;  4EJQ A;  1MK2 A;  4DY6 A;  1K3Q A;  3GQS A;  3A77 A;  2CSW A;  2P1R A;  4A0E A;  1YT5 A; 
#chains in the Genus database with same CATH homology
 1K2N A;  3MDB A;  1J4Q A;  2XXS A;  1ZOQ A;  1FHR A;  3VA1 A;  1MZK A;  3HUE A;  1LGP A;  3I6U A;  1WV3 A;  3UMZ A;  4JIW D;  4KU0 D;  1DEV A;  1WLN A;  1MR1 A;  2LC1 A;  1QU5 A;  1GXC A;  2A0T A;  3ELS A;  5E50 A;  3DSH A;  3S40 A;  5DJO A;  4V24 A;  3VZC A;  4D9V A;  1KHX A;  4G2S A;  3UV0 A;  1G6G A;  2FEZ A;  5JEK A;  1K3N A;  4WER A;  2JGR A;  3I0M A;  3UNM A;  1G88 A;  5BVI A;  3VZD A;  1K2M A;  5JEM A;  1LGQ A;  1R21 A;  3UNN A;  1J4O A;  3VZB A;  3HX1 A;  3ELV A;  4EGX A;  4A4Y A;  1U7F A;  1J4P A;  3T5P A;  2KB3 A;  2PIE A;  5JEJ A;  4JON A;  2W3O A;  3FM8 A;  1U7V A;  2QVL A;  1YGS A;  2JPE A;  2QV7 A;  4WRR A;  5JER A;  2FF4 A;  3I0N A;  2JQL A;  3GMJ A;  2JKD A;  2JQJ A;  3VPY A;  1J4L A;  4L02 A;  1K3J A;  1U7F B;  2EH0 A;  2KB4 A;  4QCJ A;  1DMZ A;  5JEO A;  5A8I A;  3DIT A;  1J2F A;  1QWT A;  2XT9 B;  1G3G A;  1DD1 A;  1U7V B;  2BON A;  3VA4 A;  3PO8 A;  3POA A;  4R9P A;  1UHT A;  5JEL A;  5C4V A;  3I6W A;  2KFU A;  1UJX A;  1FHQ A;  1YJM A;  2G1L A;  3OUN A;  4JIV D;  1YJ5 C;  2BRF A;  3KT9 A;  2JQI A;  1KHU A;  2KKL A;  2AFF A;  3UOT A;  3HUF A;  1MJS A;  4H87 A;  1J4K A;  3UN0 A;  4EJQ A;  1MK2 A;  1K3Q A;  3GQS A;  3A77 A;  2CSW A;  2P1R A;  4A0E A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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