2AHKA

Crystal structure of the met-form of the copper-bound streptomyces castaneoglobisporus tyrosinase in complex with a caddie protein obtained by soking in cupric sulfate for 6 months
Total Genus 104
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
104
sequence length
273
structure length
273
Chain Sequence
TVRKNQATLTADEKRRFVAAVLELKRSGRYDEFVRTHNEFIMSDTDSGERTGHRSPSFLPWHRRFLLDFEQALQSVDSSVTLPYWDWSADRTVRASLWAPDFLGGTGRSTDGRVMDGPFAASTGNWPINVRVDSRTYLRRSLGGSVAELPTRAEVESVLAISAYDLPPYNSASEGFRNHLEGWRGVNLHNRVHVWVGGQMATGVSPNDPVFWLHHAYVDKLWAEWQRRHPDSAYVPTGGTPDVVDLNETMKPWNTVRPADLLDHTAYYTFDAL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/metal transport
molecule keywords TYROSINASE
publication title Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
pubmed doi rcsb
source organism Streptomyces castaneoglobisporus
total genus 104
structure length 273
sequence length 273
ec nomenclature ec 1.14.18.1: Tyrosinase.
pdb deposition date 2005-07-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00264 Tyrosinase Common central domain of tyrosinase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1280.10 Mainly Alpha Orthogonal Bundle di-copper center containing domain from catechol oxidase Di-copper center containing domain from catechol oxidase 2ahkA00
5I3AA 1LLAA 4D87A 4J6VA 3GWJA 3AWXA 4OUAA 3AWZA 3AWSA 1WX2A 4J6UA 1WX4A 4HD6A 4Z0ZA 3HHSB 2ZMYA 1WX5A 3WKYA 3AWWA 1LNLA 2Y9XA 4Z10A 4P6SA 3NPYA 2ZWEA 4J3RA 2AHKA 1BUGA 1HCYA 3AWVA 4P6TA 2AHLA 4J6TA 3AX0A 1JS8A 3HHSA 3W6QA 4J3QA 1BT2A 4Z0YA 4HD4A 4J3PA 4P6RA 2ZMZA 4L37B 3QJOA 4YZWA 2ZWDA 1WXCA 3AWYA 3WJMB 3NQ1A 1BT3A 3NQ0A 3NM8A 4OUAB 1OXYA 3WJMA 5I38A 5CE9A 2ZMXA 3NTMA 3NQ5A 2ZWFA 2ZWGA 2Y9WA 2P3XA 5I3BA 3AWUA 1NOLA 1BT1A 1HC1A 4L37A 3W6WA 4HD7A 1LL1A 3AWTA
chains in the Genus database with same CATH superfamily
5I3AA 1LLAA 4D87A 4J6VA 3GWJA 3AWXA 4OUAA 3AWZA 3AWSA 1WX2A 4J6UA 1WX4A 4HD6A 4Z0ZA 3HHSB 2ZMYA 1WX5A 3WKYA 3AWWA 1LNLA 2Y9XA 4Z10A 4P6SA 3NPYA 2ZWEA 4J3RA 2AHKA 1BUGA 1HCYA 3AWVA 4P6TA 2AHLA 4J6TA 3AX0A 1JS8A 3HHSA 3W6QA 4J3QA 1BT2A 4Z0YA 4HD4A 4J3PA 4P6RA 2ZMZA 4L37B 3QJOA 4YZWA 2ZWDA 1WXCA 3AWYA 3WJMB 3NQ1A 1BT3A 3NQ0A 3NM8A 4OUAB 1OXYA 3WJMA 5I38A 5CE9A 2ZMXA 3NTMA 3NQ5A 2ZWFA 2ZWGA 2Y9WA 2P3XA 5I3BA 3AWUA 1NOLA 1BT1A 1HC1A 4L37A 3W6WA 4HD7A 1LL1A 3AWTA
chains in the Genus database with same CATH topology
5I3AA 1LLAA 4D87A 4J6VA 3GWJA 3AWXA 4OUAA 3AWZA 3AWSA 1WX2A 4J6UA 1WX4A 4HD6A 4Z0ZA 3HHSB 2ZMYA 1WX5A 3WKYA 3AWWA 1LNLA 2Y9XA 4Z10A 4P6SA 3NPYA 2ZWEA 4J3RA 2AHKA 1BUGA 1HCYA 3AWVA 4P6TA 2AHLA 4J6TA 3AX0A 1JS8A 3HHSA 3W6QA 4J3QA 1BT2A 4Z0YA 4HD4A 4J3PA 4P6RA 2ZMZA 4L37B 3QJOA 4YZWA 2ZWDA 1WXCA 3AWYA 3WJMB 3NQ1A 1BT3A 3NQ0A 3NM8A 4OUAB 1OXYA 3WJMA 5I38A 5CE9A 2ZMXA 3NTMA 3NQ5A 2ZWFA 2ZWGA 2Y9WA 2P3XA 5I3BA 3AWUA 1NOLA 1BT1A 1HC1A 4L37A 3W6WA 4HD7A 1LL1A 3AWTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5I3A A;  1LLA A;  4D87 A;  4J6V A;  3GWJ A;  3AWX A;  4OUA A;  3AWZ A;  3AWS A;  1WX2 A;  4J6U A;  1WX4 A;  4HD6 A;  4Z0Z A;  3HHS B;  2ZMY A;  1WX5 A;  3WKY A;  3AWW A;  1LNL A;  2Y9X A;  4Z10 A;  4P6S A;  3NPY A;  2ZWE A;  4J3R A;  2AHK A;  1BUG A;  1HCY A;  3AWV A;  4P6T A;  2AHL A;  4J6T A;  3AX0 A;  1JS8 A;  3HHS A;  3W6Q A;  4J3Q A;  1BT2 A;  4Z0Y A;  4HD4 A;  4J3P A;  4P6R A;  2ZMZ A;  4L37 B;  3QJO A;  4YZW A;  2ZWD A;  1WXC A;  3AWY A;  3WJM B;  3NQ1 A;  1BT3 A;  3NQ0 A;  3NM8 A;  4OUA B;  1OXY A;  3WJM A;  5I38 A;  5CE9 A;  2ZMX A;  3NTM A;  3NQ5 A;  2ZWF A;  2ZWG A;  2Y9W A;  2P3X A;  5I3B A;  3AWU A;  1NOL A;  1BT1 A;  1HC1 A;  4L37 A;  3W6W A;  4HD7 A;  1LL1 A;  3AWT A; 
#chains in the Genus database with same CATH topology
 5I3A A;  1LLA A;  4D87 A;  4J6V A;  3GWJ A;  3AWX A;  4OUA A;  3AWZ A;  3AWS A;  1WX2 A;  4J6U A;  1WX4 A;  4HD6 A;  4Z0Z A;  3HHS B;  2ZMY A;  1WX5 A;  3WKY A;  3AWW A;  1LNL A;  2Y9X A;  4Z10 A;  4P6S A;  3NPY A;  2ZWE A;  4J3R A;  2AHK A;  1BUG A;  1HCY A;  3AWV A;  4P6T A;  2AHL A;  4J6T A;  3AX0 A;  1JS8 A;  3HHS A;  3W6Q A;  4J3Q A;  1BT2 A;  4Z0Y A;  4HD4 A;  4J3P A;  4P6R A;  2ZMZ A;  4L37 B;  3QJO A;  4YZW A;  2ZWD A;  1WXC A;  3AWY A;  3WJM B;  3NQ1 A;  1BT3 A;  3NQ0 A;  3NM8 A;  4OUA B;  1OXY A;  3WJM A;  5I38 A;  5CE9 A;  2ZMX A;  3NTM A;  3NQ5 A;  2ZWF A;  2ZWG A;  2Y9W A;  2P3X A;  5I3B A;  3AWU A;  1NOL A;  1BT1 A;  1HC1 A;  4L37 A;  3W6W A;  4HD7 A;  1LL1 A;  3AWT A; 
#chains in the Genus database with same CATH homology
 5I3A A;  1LLA A;  4D87 A;  4J6V A;  3GWJ A;  3AWX A;  4OUA A;  3AWZ A;  3AWS A;  1WX2 A;  4J6U A;  1WX4 A;  4HD6 A;  4Z0Z A;  3HHS B;  2ZMY A;  1WX5 A;  3WKY A;  3AWW A;  1LNL A;  2Y9X A;  4Z10 A;  4P6S A;  3NPY A;  2ZWE A;  4J3R A;  2AHK A;  1BUG A;  1HCY A;  3AWV A;  4P6T A;  2AHL A;  4J6T A;  3AX0 A;  1JS8 A;  3HHS A;  3W6Q A;  4J3Q A;  1BT2 A;  4Z0Y A;  4HD4 A;  4J3P A;  4P6R A;  2ZMZ A;  4L37 B;  3QJO A;  4YZW A;  2ZWD A;  1WXC A;  3AWY A;  3WJM B;  3NQ1 A;  1BT3 A;  3NQ0 A;  3NM8 A;  4OUA B;  1OXY A;  3WJM A;  5I38 A;  5CE9 A;  2ZMX A;  3NTM A;  3NQ5 A;  2ZWF A;  2ZWG A;  2Y9W A;  2P3X A;  5I3B A;  3AWU A;  1NOL A;  1BT1 A;  1HC1 A;  4L37 A;  3W6W A;  4HD7 A;  1LL1 A;  3AWT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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