2AHLB

Crystal structure of the hydroxylamine-induced deoxy-form of the copper-bound streptomyces castaneoglobisporus tyrosinase in complex with a caddie protein
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
82
structure length
71
Chain Sequence
AAPESFDEVYKGRRIQGRPAGYEVFVDGVQLHVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/metal transport
molecule keywords TYROSINASE
publication title Crystallographic Evidence That the Dinuclear Copper Center of Tyrosinase Is Flexible during Catalysis
pubmed doi rcsb
source organism Streptomyces castaneoglobisporus
total genus 16
structure length 71
sequence length 82
ec nomenclature
pdb deposition date 2005-07-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 2ahlB01
2ZWFB 1WX4B 3AX0B 2AHKB 3AWZB 3AWWB 1WX5B 1WXCB 2JV8A 2ZWEB 3AWVB 2ZWDB 3AWSB 2ZMZB 3AWXB 3AWTB 2ZMXB 3AWYB 2ZWGB 2ZMYB 2AHLB 1WX2B 3AWUB
chains in the Genus database with same CATH superfamily
2ZWFB 4NBBA 1WX4B 1WW9A 3AX0B 2AHKB 4NBFA 4NBGA 3AWZB 3AWWB 1WX5B 2DE7A 1WXCB 4NB8A 2JV8A 4NBDA 2ZWEB 3AWVB 4NBHA 3VMIA 2ZWDB 1Z02A 3AWSB 3GCFA 2ZMZB 3AWXB 4NBCA 3GKQA 3AWTB 1Z01A 3VMHA 4NBEA 4NBAA 2ZMXB 3AWYB 2ZWGB 3VMGA 2DE5A 2DE6A 2AHLB 1Z03A 2ZMYB 4NB9A 1WX2B 3AWUB
chains in the Genus database with same CATH topology
2ZWFB 1WX4B 3AX0B 2AHKB 3AWZB 3AWWB 1WX5B 1WXCB 2JV8A 2ZWEB 3AWVB 2ZWDB 3AWSB 2ZMZB 3AWXB 3AWTB 2ZMXB 3AWYB 2ZWGB 2ZMYB 2AHLB 1WX2B 3AWUB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ZWF B;  1WX4 B;  3AX0 B;  2AHK B;  3AWZ B;  3AWW B;  1WX5 B;  1WXC B;  2JV8 A;  2ZWE B;  3AWV B;  2ZWD B;  3AWS B;  2ZMZ B;  3AWX B;  3AWT B;  2ZMX B;  3AWY B;  2ZWG B;  2ZMY B;  2AHL B;  1WX2 B;  3AWU B; 
#chains in the Genus database with same CATH topology
 2ZWF B;  4NBB A;  1WX4 B;  1WW9 A;  3AX0 B;  2AHK B;  4NBF A;  4NBG A;  3AWZ B;  3AWW B;  1WX5 B;  2DE7 A;  1WXC B;  4NB8 A;  2JV8 A;  4NBD A;  2ZWE B;  3AWV B;  4NBH A;  3VMI A;  2ZWD B;  1Z02 A;  3AWS B;  3GCF A;  2ZMZ B;  3AWX B;  4NBC A;  3GKQ A;  3AWT B;  1Z01 A;  3VMH A;  4NBE A;  4NBA A;  2ZMX B;  3AWY B;  2ZWG B;  3VMG A;  2DE5 A;  2DE6 A;  2AHL B;  1Z03 A;  2ZMY B;  4NB9 A;  1WX2 B;  3AWU B; 
#chains in the Genus database with same CATH homology
 2ZWF B;  1WX4 B;  3AX0 B;  2AHK B;  3AWZ B;  3AWW B;  1WX5 B;  1WXC B;  2JV8 A;  2ZWE B;  3AWV B;  2ZWD B;  3AWS B;  2ZMZ B;  3AWX B;  3AWT B;  2ZMX B;  3AWY B;  2ZWG B;  2ZMY B;  2AHL B;  1WX2 B;  3AWU B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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