2AIJX

Formylglycine generating enzyme c336s mutant covalently bound to substrate peptide ctpsr
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
286
structure length
274
Chain Sequence
LAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMSHRSYCYRYRCAARSQNTPDSSASNLGFRCAADRLP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase activator,protein binding
molecule keywords Sulfatase modifying factor 1
publication title A general binding mechanism for all human sulfatases by the formylglycine-generating enzyme
pubmed doi rcsb
source organism Homo sapiens
total genus 79
structure length 274
sequence length 286
ec nomenclature ec 1.8.3.7: Formylglycine-generating enzyme.
pdb deposition date 2005-07-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF03781 FGE-sulfatase Sulfatase-modifying factor enzyme 1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1580.10 Alpha Beta Alpha-Beta Complex paralog of FGE (formylglycine-generating enzyme) paralog of FGE (formylglycine-generating enzyme) 2aijX00
2AIJX 2HIBX 2AFYX 2HI8X 1Y1IX 1YU0A 2Y3CA 1YU2A 1Y1GX 2IOUA 1Y1HX 2AFTX 2AIKX 1Y1EX 1YU4A 1Y1FX 2AIIX 1YU3A 1Y4JA 1YU1A 1Z70X 1Y1JX 2Q17A
chains in the Genus database with same CATH superfamily
2AIJX 2HIBX 2AFYX 2HI8X 1Y1IX 1YU0A 2Y3CA 1YU2A 1Y1GX 2IOUA 1Y1HX 2AFTX 2AIKX 1Y1EX 1YU4A 1Y1FX 2AIIX 1YU3A 1Y4JA 1YU1A 1Z70X 1Y1JX 2Q17A
chains in the Genus database with same CATH topology
2AIJX 2HIBX 2AFYX 2HI8X 1Y1IX 1YU0A 2Y3CA 1YU2A 1Y1GX 2IOUA 1Y1HX 2AFTX 2AIKX 1Y1EX 1YU4A 1Y1FX 2AIIX 1YU3A 1Y4JA 1YU1A 1Z70X 1Y1JX 2Q17A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AIJ X;  2HIB X;  2AFY X;  2HI8 X;  1Y1I X;  1YU0 A;  2Y3C A;  1YU2 A;  1Y1G X;  2IOU A;  1Y1H X;  2AFT X;  2AIK X;  1Y1E X;  1YU4 A;  1Y1F X;  2AII X;  1YU3 A;  1Y4J A;  1YU1 A;  1Z70 X;  1Y1J X;  2Q17 A; 
#chains in the Genus database with same CATH topology
 2AIJ X;  2HIB X;  2AFY X;  2HI8 X;  1Y1I X;  1YU0 A;  2Y3C A;  1YU2 A;  1Y1G X;  2IOU A;  1Y1H X;  2AFT X;  2AIK X;  1Y1E X;  1YU4 A;  1Y1F X;  2AII X;  1YU3 A;  1Y4J A;  1YU1 A;  1Z70 X;  1Y1J X;  2Q17 A; 
#chains in the Genus database with same CATH homology
 2AIJ X;  2HIB X;  2AFY X;  2HI8 X;  1Y1I X;  1YU0 A;  2Y3C A;  1YU2 A;  1Y1G X;  2IOU A;  1Y1H X;  2AFT X;  2AIK X;  1Y1E X;  1YU4 A;  1Y1F X;  2AII X;  1YU3 A;  1Y4J A;  1YU1 A;  1Z70 X;  1Y1J X;  2Q17 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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