2AP9A

Crystal structure of acetylglutamate kinase from mycobacterium tuberculosis cdc1551
Total Genus 74
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
299
structure length
299
Chain Sequence
IEALPTHIKAQVLAEALPWLKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQITAMLRRLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHGPYAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVAEALGAEKLLMLTDIDGLYTRWPDRDSLVSEIDTGTLAQLLPTLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRGEGHHHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein,transferase
molecule keywords acetylglutamate kinase
publication title Crystal structure of acetylglutamate kinase from Mycobacterium tuberculosis CDC1551
rcsb
source organism Mycobacterium tuberculosis
total genus 74
structure length 299
sequence length 299
chains with identical sequence B, C, D, E, F
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-08-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2ap9A00
4OLCA 2BUFA 1GS5A 2BTYA 2BMUA 2BNFA 4Q1TA 3QVFA 1E19A 3LL5A 3ZZFA 3EK5A 2BRIA 3ZZGA 2OGXB 3AB4A 1YBDA 1GSJA 1OH9A 2JI5A 2V5HA 3B8GA 3S6GA 3K52A 2AKOA 3C1MA 2BNDA 2J4JA 3QUOA 2HMFA 3WWMA 1B7BA 2JJXA 2VA1A 2BRXA 3NWYA 2J0XA 2J4KA 2R98A 4USJA 2OGXA 3D2PA 3WWNA 4KZTA 4NDQB 4NDRB 2E9YA 3D41A 3K56A 3S6HA 4AXSA 3D40A 4JZ9A 3QUNA 3LKKA 3KZFA 4NDPB 1Z9DA 4NDQA 4NDRA 3C1NA 2J4LA 3QURA 4NDOB 4A7XA 2WXBA 3ZZIA 2JJ4A 2R8VA 3AB2A 3D2MA 4NDPA 2WE4A 3C20A 3K4YA 2AP9A 1OHAA 3AAWA 3L76A 4NDOA 3EK6A 4JZ8A 2CDQA 3K4OA 4F6TB 3T7BA 4AB7A 2J5VA 3TVIA 3LL9A 2IJ9A 2BNEA 2J5TA 4A7WA 3L86A 2A1FA 2W21A 2X2WA 3S6KA 2J0WA 4I49A 4F6TA 2RD5A 3U6UA 3ZZHA 2WE5A 2V4YA 4JZ7A 3QVHA 1OHBA
chains in the Genus database with same CATH superfamily
4OLCA 2BUFA 1GS5A 2BTYA 2BMUA 2BNFA 4Q1TA 3QVFA 1E19A 3LL5A 3ZZFA 3EK5A 2BRIA 3ZZGA 2OGXB 3AB4A 1YBDA 1GSJA 1OH9A 2JI5A 2V5HA 3B8GA 3S6GA 3K52A 2AKOA 3C1MA 2BNDA 2J4JA 3QUOA 2HMFA 3WWMA 1B7BA 2JJXA 2VA1A 2BRXA 3NWYA 2J0XA 2J4KA 2R98A 4USJA 2OGXA 3D2PA 3WWNA 4KZTA 4NDQB 4NDRB 2E9YA 3D41A 3K56A 3S6HA 4AXSA 3D40A 4JZ9A 3QUNA 3LKKA 3KZFA 4NDPB 1Z9DA 4NDQA 4NDRA 3C1NA 2J4LA 3QURA 4NDOB 4A7XA 2WXBA 3ZZIA 2JJ4A 2R8VA 3AB2A 3D2MA 4NDPA 2WE4A 3C20A 3K4YA 2AP9A 1OHAA 3AAWA 3L76A 4NDOA 3EK6A 4JZ8A 2CDQA 3K4OA 4F6TB 3T7BA 4AB7A 2J5VA 3TVIA 3LL9A 2IJ9A 2BNEA 2J5TA 4A7WA 3L86A 2A1FA 2W21A 2X2WA 3S6KA 2J0WA 4I49A 4F6TA 2RD5A 3U6UA 3ZZHA 2WE5A 2V4YA 4JZ7A 3QVHA 1OHBA
chains in the Genus database with same CATH topology
4OLCA 2BUFA 1GS5A 2BTYA 2BMUA 2BNFA 4Q1TA 3QVFA 1E19A 3LL5A 3ZZFA 3EK5A 2BRIA 3ZZGA 2OGXB 3AB4A 1YBDA 1GSJA 1OH9A 2JI5A 2V5HA 3B8GA 3S6GA 3K52A 2AKOA 3C1MA 2BNDA 2J4JA 3QUOA 2HMFA 3WWMA 1B7BA 2JJXA 2VA1A 2BRXA 3NWYA 2J0XA 2J4KA 2R98A 4USJA 2OGXA 3D2PA 3WWNA 4KZTA 4NDQB 4NDRB 2E9YA 3D41A 3K56A 3S6HA 4AXSA 3D40A 4JZ9A 3QUNA 3LKKA 3KZFA 4NDPB 1Z9DA 4NDQA 4NDRA 3C1NA 2J4LA 3QURA 4NDOB 4A7XA 2WXBA 3ZZIA 2JJ4A 2R8VA 3AB2A 3D2MA 4NDPA 2WE4A 3C20A 3K4YA 2AP9A 1OHAA 3AAWA 3L76A 4NDOA 3EK6A 4JZ8A 2CDQA 3K4OA 4F6TB 3T7BA 4AB7A 2J5VA 3TVIA 3LL9A 2IJ9A 2BNEA 2J5TA 4A7WA 3L86A 2A1FA 2W21A 2X2WA 3S6KA 2J0WA 4I49A 4F6TA 2RD5A 3U6UA 3ZZHA 2WE5A 2V4YA 4JZ7A 3QVHA 1OHBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OLC A;  2BUF A;  1GS5 A;  2BTY A;  2BMU A;  2BNF A;  4Q1T A;  3QVF A;  1E19 A;  3LL5 A;  3ZZF A;  3EK5 A;  2BRI A;  3ZZG A;  2OGX B;  3AB4 A;  1YBD A;  1GSJ A;  1OH9 A;  2JI5 A;  2V5H A;  3B8G A;  3S6G A;  3K52 A;  2AKO A;  3C1M A;  2BND A;  2J4J A;  3QUO A;  2HMF A;  3WWM A;  1B7B A;  2JJX A;  2VA1 A;  2BRX A;  3NWY A;  2J0X A;  2J4K A;  2R98 A;  4USJ A;  2OGX A;  3D2P A;  3WWN A;  4KZT A;  4NDQ B;  4NDR B;  2E9Y A;  3D41 A;  3K56 A;  3S6H A;  4AXS A;  3D40 A;  4JZ9 A;  3QUN A;  3LKK A;  3KZF A;  4NDP B;  1Z9D A;  4NDQ A;  4NDR A;  3C1N A;  2J4L A;  3QUR A;  4NDO B;  4A7X A;  2WXB A;  3ZZI A;  2JJ4 A;  2R8V A;  3AB2 A;  3D2M A;  4NDP A;  2WE4 A;  3C20 A;  3K4Y A;  2AP9 A;  1OHA A;  3AAW A;  3L76 A;  4NDO A;  3EK6 A;  4JZ8 A;  2CDQ A;  3K4O A;  4F6T B;  3T7B A;  4AB7 A;  2J5V A;  3TVI A;  3LL9 A;  2IJ9 A;  2BNE A;  2J5T A;  4A7W A;  3L86 A;  2A1F A;  2W21 A;  2X2W A;  3S6K A;  2J0W A;  4I49 A;  4F6T A;  2RD5 A;  3U6U A;  3ZZH A;  2WE5 A;  2V4Y A;  4JZ7 A;  3QVH A;  1OHB A; 
#chains in the Genus database with same CATH topology
 4OLC A;  2BUF A;  1GS5 A;  2BTY A;  2BMU A;  2BNF A;  4Q1T A;  3QVF A;  1E19 A;  3LL5 A;  3ZZF A;  3EK5 A;  2BRI A;  3ZZG A;  2OGX B;  3AB4 A;  1YBD A;  1GSJ A;  1OH9 A;  2JI5 A;  2V5H A;  3B8G A;  3S6G A;  3K52 A;  2AKO A;  3C1M A;  2BND A;  2J4J A;  3QUO A;  2HMF A;  3WWM A;  1B7B A;  2JJX A;  2VA1 A;  2BRX A;  3NWY A;  2J0X A;  2J4K A;  2R98 A;  4USJ A;  2OGX A;  3D2P A;  3WWN A;  4KZT A;  4NDQ B;  4NDR B;  2E9Y A;  3D41 A;  3K56 A;  3S6H A;  4AXS A;  3D40 A;  4JZ9 A;  3QUN A;  3LKK A;  3KZF A;  4NDP B;  1Z9D A;  4NDQ A;  4NDR A;  3C1N A;  2J4L A;  3QUR A;  4NDO B;  4A7X A;  2WXB A;  3ZZI A;  2JJ4 A;  2R8V A;  3AB2 A;  3D2M A;  4NDP A;  2WE4 A;  3C20 A;  3K4Y A;  2AP9 A;  1OHA A;  3AAW A;  3L76 A;  4NDO A;  3EK6 A;  4JZ8 A;  2CDQ A;  3K4O A;  4F6T B;  3T7B A;  4AB7 A;  2J5V A;  3TVI A;  3LL9 A;  2IJ9 A;  2BNE A;  2J5T A;  4A7W A;  3L86 A;  2A1F A;  2W21 A;  2X2W A;  3S6K A;  2J0W A;  4I49 A;  4F6T A;  2RD5 A;  3U6U A;  3ZZH A;  2WE5 A;  2V4Y A;  4JZ7 A;  3QVH A;  1OHB A; 
#chains in the Genus database with same CATH homology
 4OLC A;  2BUF A;  1GS5 A;  2BTY A;  2BMU A;  2BNF A;  4Q1T A;  3QVF A;  1E19 A;  3LL5 A;  3ZZF A;  3EK5 A;  2BRI A;  3ZZG A;  2OGX B;  3AB4 A;  1YBD A;  1GSJ A;  1OH9 A;  2JI5 A;  2V5H A;  3B8G A;  3S6G A;  3K52 A;  2AKO A;  3C1M A;  2BND A;  2J4J A;  3QUO A;  2HMF A;  3WWM A;  1B7B A;  2JJX A;  2VA1 A;  2BRX A;  3NWY A;  2J0X A;  2J4K A;  2R98 A;  4USJ A;  2OGX A;  3D2P A;  3WWN A;  4KZT A;  4NDQ B;  4NDR B;  2E9Y A;  3D41 A;  3K56 A;  3S6H A;  4AXS A;  3D40 A;  4JZ9 A;  3QUN A;  3LKK A;  3KZF A;  4NDP B;  1Z9D A;  4NDQ A;  4NDR A;  3C1N A;  2J4L A;  3QUR A;  4NDO B;  4A7X A;  2WXB A;  3ZZI A;  2JJ4 A;  2R8V A;  3AB2 A;  3D2M A;  4NDP A;  2WE4 A;  3C20 A;  3K4Y A;  2AP9 A;  1OHA A;  3AAW A;  3L76 A;  4NDO A;  3EK6 A;  4JZ8 A;  2CDQ A;  3K4O A;  4F6T B;  3T7B A;  4AB7 A;  2J5V A;  3TVI A;  3LL9 A;  2IJ9 A;  2BNE A;  2J5T A;  4A7W A;  3L86 A;  2A1F A;  2W21 A;  2X2W A;  3S6K A;  2J0W A;  4I49 A;  4F6T A;  2RD5 A;  3U6U A;  3ZZH A;  2WE5 A;  2V4Y A;  4JZ7 A;  3QVH A;  1OHB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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