2AR5A

Crystal structure of the mammalian c2alpha-pi3 kinase px-domain
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
117
structure length
117
Chain Sequence
MDGRIKEVSVFTYHKKYNPDKHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSIIFPLWKLPGFPNRMVLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHGSHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Phosphoinositide 3-kinase
publication title Ligand-binding specificity of PI3Kinase C2alpha PX domain.
rcsb
source organism Homo sapiens
total genus 27
structure length 117
sequence length 117
ec nomenclature ec 2.7.1.154: Phosphatidylinositol-4-phosphate 3-kinase.
pdb deposition date 2005-08-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00787 PX PX domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1520.10 Alpha Beta 2-Layer Sandwich PX Domain Phox-like domain 2ar5A00
4OXWA 2RAJA 2AR5A 2V6VA 2YPSA 4AKVA 4IKDA 4P2IA 4ON3A 1OCUA 3IQ2A 1GD5A 2CZOA 2L73A 4PQPA 4AZ9A 2REAA 1KMDA 1XTNA 1KQ6A 4IKBA 3DYTA 4PQOA 2I4KA 2DYBA 3P0CA 4HASA 2REDA 1OCSA 3HPBA 2ETTA 3HPCX 2WWEA 4P2JA 1H6HA 4IKBB 3LUIA 2IWLX 1XTEA 2RAKA 1O7KA 4BGJA 2CSKA 2RAIA 2V14A 4PZGA 3FOGA
chains in the Genus database with same CATH superfamily
4OXWA 2RAJA 2AR5A 2V6VA 2YPSA 4AKVA 4IKDA 4P2IA 4ON3A 1OCUA 3IQ2A 1GD5A 2CZOA 2L73A 4PQPA 4AZ9A 2REAA 1KMDA 1XTNA 1KQ6A 4IKBA 3DYTA 4PQOA 2I4KA 2DYBA 3P0CA 4HASA 2REDA 1OCSA 3HPBA 2ETTA 3HPCX 2WWEA 4P2JA 1H6HA 4IKBB 3LUIA 2IWLX 1XTEA 2RAKA 1O7KA 4BGJA 2CSKA 2RAIA 2V14A 4PZGA 3FOGA
chains in the Genus database with same CATH topology
4OXWA 2RAJA 2AR5A 2V6VA 2YPSA 4AKVA 4IKDA 4P2IA 4ON3A 1OCUA 3IQ2A 1GD5A 2CZOA 2L73A 4PQPA 4AZ9A 2REAA 1KMDA 1XTNA 1KQ6A 4IKBA 3DYTA 4PQOA 2I4KA 2DYBA 3P0CA 4HASA 2REDA 1OCSA 3HPBA 2ETTA 3HPCX 2WWEA 4P2JA 1H6HA 4IKBB 3LUIA 2IWLX 1XTEA 2RAKA 1O7KA 4BGJA 2CSKA 2RAIA 2V14A 4PZGA 3FOGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OXW A;  2RAJ A;  2AR5 A;  2V6V A;  2YPS A;  4AKV A;  4IKD A;  4P2I A;  4ON3 A;  1OCU A;  3IQ2 A;  1GD5 A;  2CZO A;  2L73 A;  4PQP A;  4AZ9 A;  2REA A;  1KMD A;  1XTN A;  1KQ6 A;  4IKB A;  3DYT A;  4PQO A;  2I4K A;  2DYB A;  3P0C A;  4HAS A;  2RED A;  1OCS A;  3HPB A;  2ETT A;  3HPC X;  2WWE A;  4P2J A;  1H6H A;  4IKB B;  3LUI A;  2IWL X;  1XTE A;  2RAK A;  1O7K A;  4BGJ A;  2CSK A;  2RAI A;  2V14 A;  4PZG A;  3FOG A; 
#chains in the Genus database with same CATH topology
 4OXW A;  2RAJ A;  2AR5 A;  2V6V A;  2YPS A;  4AKV A;  4IKD A;  4P2I A;  4ON3 A;  1OCU A;  3IQ2 A;  1GD5 A;  2CZO A;  2L73 A;  4PQP A;  4AZ9 A;  2REA A;  1KMD A;  1XTN A;  1KQ6 A;  4IKB A;  3DYT A;  4PQO A;  2I4K A;  2DYB A;  3P0C A;  4HAS A;  2RED A;  1OCS A;  3HPB A;  2ETT A;  3HPC X;  2WWE A;  4P2J A;  1H6H A;  4IKB B;  3LUI A;  2IWL X;  1XTE A;  2RAK A;  1O7K A;  4BGJ A;  2CSK A;  2RAI A;  2V14 A;  4PZG A;  3FOG A; 
#chains in the Genus database with same CATH homology
 4OXW A;  2RAJ A;  2AR5 A;  2V6V A;  2YPS A;  4AKV A;  4IKD A;  4P2I A;  4ON3 A;  1OCU A;  3IQ2 A;  1GD5 A;  2CZO A;  2L73 A;  4PQP A;  4AZ9 A;  2REA A;  1KMD A;  1XTN A;  1KQ6 A;  4IKB A;  3DYT A;  4PQO A;  2I4K A;  2DYB A;  3P0C A;  4HAS A;  2RED A;  1OCS A;  3HPB A;  2ETT A;  3HPC X;  2WWE A;  4P2J A;  1H6H A;  4IKB B;  3LUI A;  2IWL X;  1XTE A;  2RAK A;  1O7K A;  4BGJ A;  2CSK A;  2RAI A;  2V14 A;  4PZG A;  3FOG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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