2B4WA

Hypothetical protein from leishmania major
Total Genus 65
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
310
structure length
292
Chain Sequence
KQVKAAFEANKRVYESVLLTFKGVDGYDVYNCSVPFSYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPELSWELEDPYIAKINNEMIFGGTRVRILSYYGYFYRGTPDELTYFTRGPGCMKDIRVLQLQDGRLGVFSRPRVASIGFVILNSIDELGAEVIAKAPPLDILNAWGGVNQAYLLSSGKVGCIGHYSYEQSVYVNYAFVLDPQSRAITGAKIIGTKSCYPPCEPKVPLLADCVFASGIVMRSDGKVDLYSGVGDSHEGRITIDYPFKGHGTIIGDLHFPM
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Structural genomics, unknown function
molecule keywords hypothetical protein, conserved
publication title Hypothetical protein from leishmania major
rcsb
source organism Leishmania major
total genus 65
structure length 292
sequence length 310
ec nomenclature
pdb deposition date 2005-09-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF08950 DUF1861 Protein of unknown function (DUF1861)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2; Chain A Glycosyl hydrolase domain; family 43 2b4wA00
3C7GA 3VSZA 3QEFA 5B6SA 2ADEA 3LFIA 3AKHA 4FFFA 3UGGA 2B4WA 3VT1A 4U6BA 1ST8A 4NOVA 1PT2A 4D47A 4N4BA 1VKDA 5A8DA 4N2ZA 3LDRA 1W18A 5FIXA 2QQUA 3LEMA 3VSFA 3D61A 4UDGA 1Y9MA 4FFIA 2AEYA 3BYJA 5FLWA 3QEDA 2XQRA 3LV4A 2QQWA 4UDKA 3P2NA 3R67A 5FMBA 2X8SA 3QC2A 4AK6A 3OM7A 4O8PA 4KCAA 4N1IA 2YFTA 2X8TA 3LIGA 3RWKX 3WAUA 4KCBA 5GLMA 3VT0A 3R4ZA 4KC7A 3WATA 5JOYA 3KF5A 3ZXLA 2AC1A 5AYEA 5JOWA 3KF3A 1UYPA 1Y9GA 4KMIA 2ADDA 4MLGA 1YIFA 3AKIA 3BYNA 2AEZA 3C7EA 4N2RA 3ZXKA 3U75A 3D5ZA 1GYHA 4QQSA 1OYGA 3CU9A 3D60A 4ONZA 5FK7A 5GLKA 3WN1A 1GYDB 3OM4A 3ZXJA 3TAWA 5JOXA 2EXKA 4COTA 5FKCA 4AK7A 3WPVA 5GLLA 2QQVA 5A7VA 5FKBA 3K1UA 3R4YA 3OM5A 4FFGA 4PVIA 4O8OA 1WL7A 5FK8A 2EXJA 3AKFA 3NQHA 5AYDA 4EQVA 3WPZA 5ANNA 3WN2A 3AKGA 5FMCA 3PIGA 1YI7A 5A8CA 3C2UA 2YFSA 4PVAA 4UDKE 3BYLA 3WMZA 5B6TA 3UGFA 3C7HA 3D5YA 2VDTA 3VSRA 2YFRA 3OM6A 3WPYA 4UDIA 3SC7X 3C7OA 4UDJA 5GLQA 5A7VB 4KC8A 5GLOA 5C0PA 4AK5A 5AY9A 1W2TA 3VT2A 3LF7A 3VSSA 2OXBA 3LIHA 3PIJA 3WASA 3LDKA 5FMDA 5GLNA 3WPUA 3BYKA 3C7FA 5AYCA 3UGHA 5JOZA 3U14A 5GLPA 3KSTA 2EXHA 3OM2A 1UV4A 3WN0A 2X8FA 1GYEB 2EXIA 3QEEA 4U6DA 3QZ4A 1Y7BA 4O8NA 5GLRA 4FFHA 3WMYA 1Y4WA 1YRZA
chains in the Genus database with same CATH superfamily
3C7GA 3VSZA 3QEFA 5B6SA 2ADEA 1TL2A 3LFIA 3AKHA 4FFFA 3UGGA 2B4WA 3VT1A 4U6BA 1ST8A 4NOVA 1PT2A 4D47A 4N4BA 1VKDA 5A8DA 4N2ZA 3LDRA 1W18A 5FIXA 2QQUA 3LEMA 3VSFA 3D61A 4UDGA 1Y9MA 4FFIA 2AEYA 3BYJA 5FLWA 3QEDA 2XQRA 3LV4A 2QQWA 4UDKA 3P2NA 3R67A 5FMBA 2X8SA 3QC2A 4AK6A 3OM7A 4O8PA 4KCAA 4N1IA 2YFTA 2X8TA 3LIGA 3RWKX 3WAUA 4KCBA 5GLMA 3VT0A 3R4ZA 4KC7A 3WATA 5JOYA 3KF5A 3ZXLA 2AC1A 5AYEA 5JOWA 3KF3A 1UYPA 1Y9GA 4KMIA 2ADDA 4MLGA 1YIFA 3AKIA 3BYNA 2AEZA 3C7EA 4N2RA 3ZXKA 3U75A 3D5ZA 1GYHA 4QQSA 1OYGA 3CU9A 3D60A 4ONZA 5FK7A 5GLKA 3WN1A 1GYDB 3OM4A 3ZXJA 3TAWA 5JOXA 2EXKA 4COTA 5FKCA 4AK7A 3WPVA 5GLLA 2QQVA 5A7VA 5FKBA 3K1UA 3R4YA 3OM5A 4FFGA 4PVIA 4O8OA 1WL7A 5FK8A 2EXJA 3AKFA 3NQHA 5AYDA 4EQVA 3WPZA 5ANNA 3WN2A 3AKGA 5FMCA 3PIGA 1YI7A 5A8CA 3C2UA 2YFSA 4PVAA 4UDKE 3BYLA 3WMZA 5B6TA 3UGFA 3C7HA 3D5YA 2VDTA 3VSRA 2YFRA 3OM6A 3WPYA 4UDIA 3SC7X 3C7OA 4UDJA 5GLQA 5A7VB 4KC8A 5GLOA 5C0PA 4AK5A 5AY9A 1W2TA 3VT2A 3LF7A 3VSSA 2OXBA 3LIHA 3PIJA 3WASA 3LDKA 5FMDA 5GLNA 3WPUA 3BYKA 3C7FA 5AYCA 3UGHA 5JOZA 3U14A 5GLPA 3KSTA 2EXHA 3OM2A 1UV4A 3WN0A 2X8FA 1GYEB 2EXIA 3QEEA 4U6DA 3QZ4A 1Y7BA 4O8NA 5GLRA 4FFHA 3WMYA 5C2MA 1Y4WA 1YRZA
chains in the Genus database with same CATH topology
3C7GA 3VSZA 3QEFA 5B6SA 2ADEA 3LFIA 3AKHA 4FFFA 3UGGA 2B4WA 3VT1A 4U6BA 1ST8A 4NOVA 1PT2A 4D47A 4N4BA 1VKDA 5A8DA 4N2ZA 3LDRA 1W18A 5FIXA 2QQUA 3LEMA 3VSFA 3D61A 4UDGA 1Y9MA 4FFIA 2AEYA 3BYJA 5FLWA 3QEDA 2XQRA 3LV4A 2QQWA 4UDKA 3P2NA 3R67A 5FMBA 2X8SA 3QC2A 4AK6A 3OM7A 4O8PA 4KCAA 4N1IA 2YFTA 2X8TA 3LIGA 3RWKX 3WAUA 4KCBA 5GLMA 3VT0A 3R4ZA 4KC7A 3WATA 5JOYA 3KF5A 3ZXLA 2AC1A 5AYEA 5JOWA 3KF3A 1UYPA 1Y9GA 4KMIA 2ADDA 4MLGA 1YIFA 3AKIA 3BYNA 2AEZA 3C7EA 4N2RA 3ZXKA 3U75A 3D5ZA 1GYHA 4QQSA 1OYGA 3CU9A 3D60A 4ONZA 5FK7A 5GLKA 3WN1A 1GYDB 3OM4A 3ZXJA 3TAWA 5JOXA 2EXKA 4COTA 5FKCA 4AK7A 3WPVA 5GLLA 2QQVA 5A7VA 5FKBA 3K1UA 3R4YA 3OM5A 4FFGA 4PVIA 4O8OA 1WL7A 5FK8A 2EXJA 3AKFA 3NQHA 5AYDA 4EQVA 3WPZA 5ANNA 3WN2A 3AKGA 5FMCA 3PIGA 1YI7A 5A8CA 3C2UA 2YFSA 4PVAA 4UDKE 3BYLA 3WMZA 5B6TA 3UGFA 3C7HA 3D5YA 2VDTA 3VSRA 2YFRA 3OM6A 3WPYA 4UDIA 3SC7X 3C7OA 4UDJA 5GLQA 5A7VB 4KC8A 5GLOA 5C0PA 4AK5A 5AY9A 1W2TA 3VT2A 3LF7A 3VSSA 2OXBA 3LIHA 3PIJA 3WASA 3LDKA 5FMDA 5GLNA 3WPUA 3BYKA 3C7FA 5AYCA 3UGHA 5JOZA 3U14A 5GLPA 3KSTA 2EXHA 3OM2A 1UV4A 3WN0A 2X8FA 1GYEB 2EXIA 3QEEA 4U6DA 3QZ4A 1Y7BA 4O8NA 5GLRA 4FFHA 3WMYA 1Y4WA 1YRZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3C7G A;  3VSZ A;  3QEF A;  5B6S A;  2ADE A;  3LFI A;  3AKH A;  4FFF A;  3UGG A;  2B4W A;  3VT1 A;  4U6B A;  1ST8 A;  4NOV A;  1PT2 A;  4D47 A;  4N4B A;  1VKD A;  5A8D A;  4N2Z A;  3LDR A;  1W18 A;  5FIX A;  2QQU A;  3LEM A;  3VSF A;  3D61 A;  4UDG A;  1Y9M A;  4FFI A;  2AEY A;  3BYJ A;  5FLW A;  3QED A;  2XQR A;  3LV4 A;  2QQW A;  4UDK A;  3P2N A;  3R67 A;  5FMB A;  2X8S A;  3QC2 A;  4AK6 A;  3OM7 A;  4O8P A;  4KCA A;  4N1I A;  2YFT A;  2X8T A;  3LIG A;  3RWK X;  3WAU A;  4KCB A;  5GLM A;  3VT0 A;  3R4Z A;  4KC7 A;  3WAT A;  5JOY A;  3KF5 A;  3ZXL A;  2AC1 A;  5AYE A;  5JOW A;  3KF3 A;  1UYP A;  1Y9G A;  4KMI A;  2ADD A;  4MLG A;  1YIF A;  3AKI A;  3BYN A;  2AEZ A;  3C7E A;  4N2R A;  3ZXK A;  3U75 A;  3D5Z A;  1GYH A;  4QQS A;  1OYG A;  3CU9 A;  3D60 A;  4ONZ A;  5FK7 A;  5GLK A;  3WN1 A;  1GYD B;  3OM4 A;  3ZXJ A;  3TAW A;  5JOX A;  2EXK A;  4COT A;  5FKC A;  4AK7 A;  3WPV A;  5GLL A;  2QQV A;  5A7V A;  5FKB A;  3K1U A;  3R4Y A;  3OM5 A;  4FFG A;  4PVI A;  4O8O A;  1WL7 A;  5FK8 A;  2EXJ A;  3AKF A;  3NQH A;  5AYD A;  4EQV A;  3WPZ A;  5ANN A;  3WN2 A;  3AKG A;  5FMC A;  3PIG A;  1YI7 A;  5A8C A;  3C2U A;  2YFS A;  4PVA A;  4UDK E;  3BYL A;  3WMZ A;  5B6T A;  3UGF A;  3C7H A;  3D5Y A;  2VDT A;  3VSR A;  2YFR A;  3OM6 A;  3WPY A;  4UDI A;  3SC7 X;  3C7O A;  4UDJ A;  5GLQ A;  5A7V B;  4KC8 A;  5GLO A;  5C0P A;  4AK5 A;  5AY9 A;  1W2T A;  3VT2 A;  3LF7 A;  3VSS A;  2OXB A;  3LIH A;  3PIJ A;  3WAS A;  3LDK A;  5FMD A;  5GLN A;  3WPU A;  3BYK A;  3C7F A;  5AYC A;  3UGH A;  5JOZ A;  3U14 A;  5GLP A;  3KST A;  2EXH A;  3OM2 A;  1UV4 A;  3WN0 A;  2X8F A;  1GYE B;  2EXI A;  3QEE A;  4U6D A;  3QZ4 A;  1Y7B A;  4O8N A;  5GLR A;  4FFH A;  3WMY A;  1Y4W A;  1YRZ A; 
#chains in the Genus database with same CATH topology
 3C7G A;  3VSZ A;  3QEF A;  5B6S A;  2ADE A;  1TL2 A;  3LFI A;  3AKH A;  4FFF A;  3UGG A;  2B4W A;  3VT1 A;  4U6B A;  1ST8 A;  4NOV A;  1PT2 A;  4D47 A;  4N4B A;  1VKD A;  5A8D A;  4N2Z A;  3LDR A;  1W18 A;  5FIX A;  2QQU A;  3LEM A;  3VSF A;  3D61 A;  4UDG A;  1Y9M A;  4FFI A;  2AEY A;  3BYJ A;  5FLW A;  3QED A;  2XQR A;  3LV4 A;  2QQW A;  4UDK A;  3P2N A;  3R67 A;  5FMB A;  2X8S A;  3QC2 A;  4AK6 A;  3OM7 A;  4O8P A;  4KCA A;  4N1I A;  2YFT A;  2X8T A;  3LIG A;  3RWK X;  3WAU A;  4KCB A;  5GLM A;  3VT0 A;  3R4Z A;  4KC7 A;  3WAT A;  5JOY A;  3KF5 A;  3ZXL A;  2AC1 A;  5AYE A;  5JOW A;  3KF3 A;  1UYP A;  1Y9G A;  4KMI A;  2ADD A;  4MLG A;  1YIF A;  3AKI A;  3BYN A;  2AEZ A;  3C7E A;  4N2R A;  3ZXK A;  3U75 A;  3D5Z A;  1GYH A;  4QQS A;  1OYG A;  3CU9 A;  3D60 A;  4ONZ A;  5FK7 A;  5GLK A;  3WN1 A;  1GYD B;  3OM4 A;  3ZXJ A;  3TAW A;  5JOX A;  2EXK A;  4COT A;  5FKC A;  4AK7 A;  3WPV A;  5GLL A;  2QQV A;  5A7V A;  5FKB A;  3K1U A;  3R4Y A;  3OM5 A;  4FFG A;  4PVI A;  4O8O A;  1WL7 A;  5FK8 A;  2EXJ A;  3AKF A;  3NQH A;  5AYD A;  4EQV A;  3WPZ A;  5ANN A;  3WN2 A;  3AKG A;  5FMC A;  3PIG A;  1YI7 A;  5A8C A;  3C2U A;  2YFS A;  4PVA A;  4UDK E;  3BYL A;  3WMZ A;  5B6T A;  3UGF A;  3C7H A;  3D5Y A;  2VDT A;  3VSR A;  2YFR A;  3OM6 A;  3WPY A;  4UDI A;  3SC7 X;  3C7O A;  4UDJ A;  5GLQ A;  5A7V B;  4KC8 A;  5GLO A;  5C0P A;  4AK5 A;  5AY9 A;  1W2T A;  3VT2 A;  3LF7 A;  3VSS A;  2OXB A;  3LIH A;  3PIJ A;  3WAS A;  3LDK A;  5FMD A;  5GLN A;  3WPU A;  3BYK A;  3C7F A;  5AYC A;  3UGH A;  5JOZ A;  3U14 A;  5GLP A;  3KST A;  2EXH A;  3OM2 A;  1UV4 A;  3WN0 A;  2X8F A;  1GYE B;  2EXI A;  3QEE A;  4U6D A;  3QZ4 A;  1Y7B A;  4O8N A;  5GLR A;  4FFH A;  3WMY A;  5C2M A;  1Y4W A;  1YRZ A; 
#chains in the Genus database with same CATH homology
 3C7G A;  3VSZ A;  3QEF A;  5B6S A;  2ADE A;  3LFI A;  3AKH A;  4FFF A;  3UGG A;  2B4W A;  3VT1 A;  4U6B A;  1ST8 A;  4NOV A;  1PT2 A;  4D47 A;  4N4B A;  1VKD A;  5A8D A;  4N2Z A;  3LDR A;  1W18 A;  5FIX A;  2QQU A;  3LEM A;  3VSF A;  3D61 A;  4UDG A;  1Y9M A;  4FFI A;  2AEY A;  3BYJ A;  5FLW A;  3QED A;  2XQR A;  3LV4 A;  2QQW A;  4UDK A;  3P2N A;  3R67 A;  5FMB A;  2X8S A;  3QC2 A;  4AK6 A;  3OM7 A;  4O8P A;  4KCA A;  4N1I A;  2YFT A;  2X8T A;  3LIG A;  3RWK X;  3WAU A;  4KCB A;  5GLM A;  3VT0 A;  3R4Z A;  4KC7 A;  3WAT A;  5JOY A;  3KF5 A;  3ZXL A;  2AC1 A;  5AYE A;  5JOW A;  3KF3 A;  1UYP A;  1Y9G A;  4KMI A;  2ADD A;  4MLG A;  1YIF A;  3AKI A;  3BYN A;  2AEZ A;  3C7E A;  4N2R A;  3ZXK A;  3U75 A;  3D5Z A;  1GYH A;  4QQS A;  1OYG A;  3CU9 A;  3D60 A;  4ONZ A;  5FK7 A;  5GLK A;  3WN1 A;  1GYD B;  3OM4 A;  3ZXJ A;  3TAW A;  5JOX A;  2EXK A;  4COT A;  5FKC A;  4AK7 A;  3WPV A;  5GLL A;  2QQV A;  5A7V A;  5FKB A;  3K1U A;  3R4Y A;  3OM5 A;  4FFG A;  4PVI A;  4O8O A;  1WL7 A;  5FK8 A;  2EXJ A;  3AKF A;  3NQH A;  5AYD A;  4EQV A;  3WPZ A;  5ANN A;  3WN2 A;  3AKG A;  5FMC A;  3PIG A;  1YI7 A;  5A8C A;  3C2U A;  2YFS A;  4PVA A;  4UDK E;  3BYL A;  3WMZ A;  5B6T A;  3UGF A;  3C7H A;  3D5Y A;  2VDT A;  3VSR A;  2YFR A;  3OM6 A;  3WPY A;  4UDI A;  3SC7 X;  3C7O A;  4UDJ A;  5GLQ A;  5A7V B;  4KC8 A;  5GLO A;  5C0P A;  4AK5 A;  5AY9 A;  1W2T A;  3VT2 A;  3LF7 A;  3VSS A;  2OXB A;  3LIH A;  3PIJ A;  3WAS A;  3LDK A;  5FMD A;  5GLN A;  3WPU A;  3BYK A;  3C7F A;  5AYC A;  3UGH A;  5JOZ A;  3U14 A;  5GLP A;  3KST A;  2EXH A;  3OM2 A;  1UV4 A;  3WN0 A;  2X8F A;  1GYE B;  2EXI A;  3QEE A;  4U6D A;  3QZ4 A;  1Y7B A;  4O8N A;  5GLR A;  4FFH A;  3WMY A;  1Y4W A;  1YRZ A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...