2B7MA

Crystal structure of the s. cerevisiae exocyst component exo70p
Total Genus 173
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
173
sequence length
551
structure length
513
Chain Sequence
SVKDLANEASKYEIILQKGINQVGLKQYTQVVHKLDDMLEDIQSGQANREENSEFHGILTHLEQLIKRSEAQLRVYFISILNSIKPFDPQINITKKMPFPYYEDQQLGALSWILDYFHGNSEGSIIQDILVGERSKLILKCMAFLEPFAKESSGMNSYTEALLGFIANEKSLVDDLYSQYTESKPHVLSQILSPLISAYAKLFGANLKIVRSNLENFGFFSFELVESINDVKKSLRGKELQNYNLLQDCTQEVRQVTQSLFRDAIDRIIKKANSISTIPSNNGVTEATVDTMSRLRKFSEYKNGCLGAMDNITRENWLPSNYKEKEYTLQNEALNWEDHNVLLSCFISDCIDTLAVNLERKAQIALMPNQEPDVANPNSSKNKHKQRIGFFILMNLTLVEQIVEKSELNLMLAGEGHSRLERLKKRYISYMVSDWRDLTANLMEGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFYSRYKDSFKNPRKHIKYTPDELTTVLNQLVR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of the S.cerevisiae Exocyst Component Exo70p
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Endocytosis/exocytosis
molecule keywords Exocyst complex component EXO70
total genus 173
structure length 513
sequence length 551
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2005-10-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03081 Exo70 Exo70 exocyst complex subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.170 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 2b7mA00
2PFVA 2B7MA 2B1EA 2PFTA 4RL5A
chains in the Genus database with same CATH superfamily
2VIXA 3HL8A 1LDKE 1FZ6E 4DTPA 4QNDA 2B7MA 2JH9A 4JS4A 3QEVA 3TJYA 3RMAA 2VJ4A 5IREA 4GAMC 3L0MA 3SUQA 3QNNA 4FJNA 4FJXA 2HD0A 3NE6A 1NEXB 2FYOA 1WAFA 3SNNA 4DTMA 4KHUA 4M3XA 4B08A 4EPHA 2K5SA 4FJGA 2H4TA 3CQ8A 4DTRA 2JQTA 4J2EA 4KHSA 4AKHA 1XU5E 2JHAA 2B8IA 2MW2A 3J27A 4DTJA 4AI6A 5IBKB 1FZHE 3SUNA 1FYZE 3QEWA 2P1MB 3QETA 3SQ1A 2OZSA 2P1QB 4DU4A 2RCUA 4FVMA 2RKHA 1FZIE 4M3RA 1XMHE 4DTOA 3RWUA 4FJIA 4FK0A 4M41A 3C94A 2OYQA 1JW2A 3SUOA 1FZ9E 1FZ5E 1XVCE 3OGMB 1FZ0E 4AKGA 4FJJA 3UO2A 4KHWA 2OVPB 3NCIA 3KD5E 3UO3A 2JHCA 2P1NB 4FK2A 3QEXA 1MHZG 2QXFA 3N1BA 4I9LA 4QNCA 5IZ7A 4DTSA 4M3WA 1N1CA 4M3YA 1XL3C 4FJ9A 1XVDE 2DEBA 4KI6A 1MTYG 2P5OA 2OVQB 1Q9XA 1XU3E 3J2PA 3L1NA 3CFRA 4FJMA 1IH7A 3HP9A 4E4BA 3NAEA 4DTNA 3OGKB 3S9HA 1XMGE 3SVIA 3V7DB 3CFPA 3RMDA 4I9QA 4EYWA 3NHGA 3QEPA 1FS1A 1FZ3E 2LF3A 2JHPA 3LZIA 2VJ5A 4ADNA 4JS5A 4HCCA 1XVEE 3LD8A 1FXXA 4J2DA 2DTUA 1FZ1E 3WSOA 3QESA 4AKIA 1XVGE 4M3UA 4M3TA 4X5MA 1IG9A 1Q9YA 4FJ5A 4J2AA 5H37A 3E4WA 3OGLB 1MHYG 4RG8A 1XVBE 2B1EA 3SQ2A 3SPZA 4FJKA 4RNGA 3SPYA 1XVFE 4I6JB 2E32A 2P1PB 3HGLA 3KD1E 4EP9A 4M42A 1FZ8E 3TAEA 4M3ZA 1FZ2E 3TABA 3NDKA 2YB5A 4RL5A 4M45A 3N1EA 3LDSA 3SI6A 3QERA 3C6OB 2E31A 3MKSB 3SJJA 4FJ7A 3QEIA 3RMBA 2OVRB 3SQ0A 4KHYA 4FK4A 3CFOA 4ICGC 3TL8B 4E3SA 4JRPA 3SQ4A 4KHNA 2JPNA 3NGIA 4JRQA 3SCXA 3UIQA 4FJHA 3C6PB 3SUPA 4DU3A 3E4YA 1XMFE 2OZMA 4X5NA 3L2OB 4J2BA 3C6NB 1FPOA 1FZ4E 3K2OA 2PFVA 3LZJA 3QNOA 4HCBA 3BVOA 2DY4A 4ADOA 4KI4A 3TAFA 4DU1A 4FJLA 4IT5A 2FW3A 2JH8A 2MMBA 4FJ8A 4DTUA 1CLQA 4DTXA 3C95A 3L8BA 4KHQA 1FZ7E 3TAGA 1MMOG 2P5GA 3LDBA 2ATQA 1P22A 3RMCA 2P1OB 2MZWB 2LF6A 2PFTA 3HGKE 1WAJA
chains in the Genus database with same CATH topology
2VIXA 3HL8A 1LDKE 1FZ6E 4DTPA 4QNDA 2B7MA 2JH9A 4JS4A 3QEVA 3TJYA 3RMAA 2VJ4A 5IREA 4GAMC 3L0MA 3SUQA 3QNNA 4FJNA 4FJXA 2HD0A 3NE6A 1NEXB 2FYOA 1WAFA 3SNNA 4DTMA 4KHUA 4M3XA 4B08A 4EPHA 4FJGA 2H4TA 3CQ8A 4DTRA 4J2EA 4KHSA 4AKHA 1XU5E 2JHAA 2B8IA 3J27A 4DTJA 4AI6A 5IBKB 1FZHE 3SUNA 1FYZE 3QEWA 2P1MB 3QETA 3SQ1A 2OZSA 2P1QB 4DU4A 2RCUA 4FVMA 1FZIE 4M3RA 4DTOA 1XMHE 3RWUA 4FJIA 4FK0A 4M41A 3C94A 2OYQA 3SUOA 1FZ9E 1FZ5E 1XVCE 3OGMB 1FZ0E 4AKGA 4FJJA 4KHWA 2OVPB 3NCIA 3KD5E 2JHCA 2P1NB 4FK2A 3QEXA 1MHZG 2QXFA 3N1BA 4I9LA 4QNCA 5IZ7A 4DTSA 4M3WA 4M3YA 1XL3C 4FJ9A 1XVDE 2DEBA 4KI6A 1MTYG 2P5OA 2OVQB 1Q9XA 1XU3E 3J2PA 3L1NA 3CFRA 4FJMA 1IH7A 3HP9A 4E4BA 3NAEA 4DTNA 3OGKB 3S9HA 1XMGE 3SVIA 3V7DB 3CFPA 3RMDA 4I9QA 4EYWA 3NHGA 3QEPA 1FS1A 1FZ3E 2LF3A 2JHPA 3LZIA 2VJ5A 4ADNA 4JS5A 4HCCA 1XVEE 3LD8A 1FXXA 4J2DA 2DTUA 1FZ1E 3WSOA 3QESA 4AKIA 1XVGE 4M3UA 4M3TA 4X5MA 1IG9A 1Q9YA 4FJ5A 4J2AA 5H37A 3E4WA 3OGLB 1MHYG 4RG8A 1XVBE 2B1EA 3SQ2A 3SPZA 4FJKA 4RNGA 3SPYA 1XVFE 4I6JB 2E32A 2P1PB 3HGLA 3KD1E 4EP9A 4M42A 1FZ8E 3TAEA 4M3ZA 1FZ2E 3TABA 3NDKA 2YB5A 4RL5A 4M45A 3N1EA 3LDSA 3SI6A 3QERA 3C6OB 2E31A 3MKSB 3SJJA 4FJ7A 3QEIA 3RMBA 2OVRB 3SQ0A 4KHYA 4FK4A 3CFOA 3TL8B 4E3SA 4JRPA 3SQ4A 4KHNA 2JPNA 3NGIA 4JRQA 3SCXA 3UIQA 4FJHA 3C6PB 3SUPA 4DU3A 3E4YA 1XMFE 2OZMA 4X5NA 3L2OB 4J2BA 3C6NB 3K2OA 1FZ4E 3LZJA 2PFVA 3QNOA 4HCBA 2DY4A 4ADOA 4KI4A 3TAFA 4DU1A 4FJLA 2FW3A 2JH8A 2MMBA 4FJ8A 4DTUA 1CLQA 4DTXA 3C95A 3L8BA 4KHQA 1FZ7E 3TAGA 1MMOG 2P5GA 3LDBA 2ATQA 1P22A 3RMCA 2P1OB 2MZWB 2LF6A 2PFTA 3HGKE 1WAJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PFV A;  2B7M A;  2B1E A;  2PFT A;  4RL5 A; 
#chains in the Genus database with same CATH topology
 2VIX A;  3HL8 A;  1LDK E;  1FZ6 E;  4DTP A;  4QND A;  2B7M A;  2JH9 A;  4JS4 A;  3QEV A;  3TJY A;  3RMA A;  2VJ4 A;  5IRE A;  4GAM C;  3L0M A;  3SUQ A;  3QNN A;  4FJN A;  4FJX A;  2HD0 A;  3NE6 A;  1NEX B;  2FYO A;  1WAF A;  3SNN A;  4DTM A;  4KHU A;  4M3X A;  4B08 A;  4EPH A;  2K5S A;  4FJG A;  2H4T A;  3CQ8 A;  4DTR A;  2JQT A;  4J2E A;  4KHS A;  4AKH A;  1XU5 E;  2JHA A;  2B8I A;  2MW2 A;  3J27 A;  4DTJ A;  4AI6 A;  5IBK B;  1FZH E;  3SUN A;  1FYZ E;  3QEW A;  2P1M B;  3QET A;  3SQ1 A;  2OZS A;  2P1Q B;  4DU4 A;  2RCU A;  4FVM A;  2RKH A;  1FZI E;  4M3R A;  1XMH E;  4DTO A;  3RWU A;  4FJI A;  4FK0 A;  4M41 A;  3C94 A;  2OYQ A;  1JW2 A;  3SUO A;  1FZ9 E;  1FZ5 E;  1XVC E;  3OGM B;  1FZ0 E;  4AKG A;  4FJJ A;  3UO2 A;  4KHW A;  2OVP B;  3NCI A;  3KD5 E;  3UO3 A;  2JHC A;  2P1N B;  4FK2 A;  3QEX A;  1MHZ G;  2QXF A;  3N1B A;  4I9L A;  4QNC A;  5IZ7 A;  4DTS A;  4M3W A;  1N1C A;  4M3Y A;  1XL3 C;  4FJ9 A;  1XVD E;  2DEB A;  4KI6 A;  1MTY G;  2P5O A;  2OVQ B;  1Q9X A;  1XU3 E;  3J2P A;  3L1N A;  3CFR A;  4FJM A;  1IH7 A;  3HP9 A;  4E4B A;  3NAE A;  4DTN A;  3OGK B;  3S9H A;  1XMG E;  3SVI A;  3V7D B;  3CFP A;  3RMD A;  4I9Q A;  4EYW A;  3NHG A;  3QEP A;  1FS1 A;  1FZ3 E;  2LF3 A;  2JHP A;  3LZI A;  2VJ5 A;  4ADN A;  4JS5 A;  4HCC A;  1XVE E;  3LD8 A;  1FXX A;  4J2D A;  2DTU A;  1FZ1 E;  3WSO A;  3QES A;  4AKI A;  1XVG E;  4M3U A;  4M3T A;  4X5M A;  1IG9 A;  1Q9Y A;  4FJ5 A;  4J2A A;  5H37 A;  3E4W A;  3OGL B;  1MHY G;  4RG8 A;  1XVB E;  2B1E A;  3SQ2 A;  3SPZ A;  4FJK A;  4RNG A;  3SPY A;  1XVF E;  4I6J B;  2E32 A;  2P1P B;  3HGL A;  3KD1 E;  4EP9 A;  4M42 A;  1FZ8 E;  3TAE A;  4M3Z A;  1FZ2 E;  3TAB A;  3NDK A;  2YB5 A;  4RL5 A;  4M45 A;  3N1E A;  3LDS A;  3SI6 A;  3QER A;  3C6O B;  2E31 A;  3MKS B;  3SJJ A;  4FJ7 A;  3QEI A;  3RMB A;  2OVR B;  3SQ0 A;  4KHY A;  4FK4 A;  3CFO A;  4ICG C;  3TL8 B;  4E3S A;  4JRP A;  3SQ4 A;  4KHN A;  2JPN A;  3NGI A;  4JRQ A;  3SCX A;  3UIQ A;  4FJH A;  3C6P B;  3SUP A;  4DU3 A;  3E4Y A;  1XMF E;  2OZM A;  4X5N A;  3L2O B;  4J2B A;  3C6N B;  1FPO A;  1FZ4 E;  3K2O A;  2PFV A;  3LZJ A;  3QNO A;  4HCB A;  3BVO A;  2DY4 A;  4ADO A;  4KI4 A;  3TAF A;  4DU1 A;  4FJL A;  4IT5 A;  2FW3 A;  2JH8 A;  2MMB A;  4FJ8 A;  4DTU A;  1CLQ A;  4DTX A;  3C95 A;  3L8B A;  4KHQ A;  1FZ7 E;  3TAG A;  1MMO G;  2P5G A;  3LDB A;  2ATQ A;  1P22 A;  3RMC A;  2P1O B;  2MZW B;  2LF6 A;  2PFT A;  3HGK E;  1WAJ A; 
#chains in the Genus database with same CATH homology
 2VIX A;  3HL8 A;  1LDK E;  1FZ6 E;  4DTP A;  4QND A;  2B7M A;  2JH9 A;  4JS4 A;  3QEV A;  3TJY A;  3RMA A;  2VJ4 A;  5IRE A;  4GAM C;  3L0M A;  3SUQ A;  3QNN A;  4FJN A;  4FJX A;  2HD0 A;  3NE6 A;  1NEX B;  2FYO A;  1WAF A;  3SNN A;  4DTM A;  4KHU A;  4M3X A;  4B08 A;  4EPH A;  4FJG A;  2H4T A;  3CQ8 A;  4DTR A;  4J2E A;  4KHS A;  4AKH A;  1XU5 E;  2JHA A;  2B8I A;  3J27 A;  4DTJ A;  4AI6 A;  5IBK B;  1FZH E;  3SUN A;  1FYZ E;  3QEW A;  2P1M B;  3QET A;  3SQ1 A;  2OZS A;  2P1Q B;  4DU4 A;  2RCU A;  4FVM A;  1FZI E;  4M3R A;  4DTO A;  1XMH E;  3RWU A;  4FJI A;  4FK0 A;  4M41 A;  3C94 A;  2OYQ A;  3SUO A;  1FZ9 E;  1FZ5 E;  1XVC E;  3OGM B;  1FZ0 E;  4AKG A;  4FJJ A;  4KHW A;  2OVP B;  3NCI A;  3KD5 E;  2JHC A;  2P1N B;  4FK2 A;  3QEX A;  1MHZ G;  2QXF A;  3N1B A;  4I9L A;  4QNC A;  5IZ7 A;  4DTS A;  4M3W A;  4M3Y A;  1XL3 C;  4FJ9 A;  1XVD E;  2DEB A;  4KI6 A;  1MTY G;  2P5O A;  2OVQ B;  1Q9X A;  1XU3 E;  3J2P A;  3L1N A;  3CFR A;  4FJM A;  1IH7 A;  3HP9 A;  4E4B A;  3NAE A;  4DTN A;  3OGK B;  3S9H A;  1XMG E;  3SVI A;  3V7D B;  3CFP A;  3RMD A;  4I9Q A;  4EYW A;  3NHG A;  3QEP A;  1FS1 A;  1FZ3 E;  2LF3 A;  2JHP A;  3LZI A;  2VJ5 A;  4ADN A;  4JS5 A;  4HCC A;  1XVE E;  3LD8 A;  1FXX A;  4J2D A;  2DTU A;  1FZ1 E;  3WSO A;  3QES A;  4AKI A;  1XVG E;  4M3U A;  4M3T A;  4X5M A;  1IG9 A;  1Q9Y A;  4FJ5 A;  4J2A A;  5H37 A;  3E4W A;  3OGL B;  1MHY G;  4RG8 A;  1XVB E;  2B1E A;  3SQ2 A;  3SPZ A;  4FJK A;  4RNG A;  3SPY A;  1XVF E;  4I6J B;  2E32 A;  2P1P B;  3HGL A;  3KD1 E;  4EP9 A;  4M42 A;  1FZ8 E;  3TAE A;  4M3Z A;  1FZ2 E;  3TAB A;  3NDK A;  2YB5 A;  4RL5 A;  4M45 A;  3N1E A;  3LDS A;  3SI6 A;  3QER A;  3C6O B;  2E31 A;  3MKS B;  3SJJ A;  4FJ7 A;  3QEI A;  3RMB A;  2OVR B;  3SQ0 A;  4KHY A;  4FK4 A;  3CFO A;  3TL8 B;  4E3S A;  4JRP A;  3SQ4 A;  4KHN A;  2JPN A;  3NGI A;  4JRQ A;  3SCX A;  3UIQ A;  4FJH A;  3C6P B;  3SUP A;  4DU3 A;  3E4Y A;  1XMF E;  2OZM A;  4X5N A;  3L2O B;  4J2B A;  3C6N B;  3K2O A;  1FZ4 E;  3LZJ A;  2PFV A;  3QNO A;  4HCB A;  2DY4 A;  4ADO A;  4KI4 A;  3TAF A;  4DU1 A;  4FJL A;  2FW3 A;  2JH8 A;  2MMB A;  4FJ8 A;  4DTU A;  1CLQ A;  4DTX A;  3C95 A;  3L8B A;  4KHQ A;  1FZ7 E;  3TAG A;  1MMO G;  2P5G A;  3LDB A;  2ATQ A;  1P22 A;  3RMC A;  2P1O B;  2MZW B;  2LF6 A;  2PFT A;  3HGK E;  1WAJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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