2B7MA

Crystal structure of the s. cerevisiae exocyst component exo70p
Total Genus 173
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
173
sequence length
551
structure length
513
Chain Sequence
SVKDLANEASKYEIILQKGINQVGLKQYTQVVHKLDDMLEDIQSGQANREENSEFHGILTHLEQLIKRSEAQLRVYFISILNSIKPFDPQINITKKMPFPYYEDQQLGALSWILDYFHGNSEGSIIQDILVGERSKLILKCMAFLEPFAKESSGMNSYTEALLGFIANEKSLVDDLYSQYTESKPHVLSQILSPLISAYAKLFGANLKIVRSNLENFGFFSFELVESINDVKKSLRGKELQNYNLLQDCTQEVRQVTQSLFRDAIDRIIKKANSISTIPSNNGVTEATVDTMSRLRKFSEYKNGCLGAMDNITRENWLPSNYKEKEYTLQNEALNWEDHNVLLSCFISDCIDTLAVNLERKAQIALMPNQEPDVANPNSSKNKHKQRIGFFILMNLTLVEQIVEKSELNLMLAGEGHSRLERLKKRYISYMVSDWRDLTANLMEGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFYSRYKDSFKNPRKHIKYTPDELTTVLNQLVR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Exocyst complex component EXO70
publication title Crystal Structure of the S.cerevisiae Exocyst Component Exo70p
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Endocytosis/exocytosis
total genus 173
structure length 513
sequence length 551
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2005-10-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03081 Exo70 Exo70 exocyst complex subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.170 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 2b7mA00
2B1EA 4RL5A 2PFTA 2PFVA 2B7MA
chains in the Genus database with same CATH superfamily
3NHGA 1FZ2E 2MW2A 3LD8A 3SUOA 4FJHA 2B7MA 2ATQA 2JHAA 3SUQA 4FJ8A 2JHPA 2DY4A 2P1NB 2E32A 1FPOA 4FJ7A 4KI4A 3CFPA 3NCIA 3LZIA 4DU4A 3QNOA 4FJXA 2JQTA 3TABA 2OYQA 4DU3A 2YB5A 2JH9A 4E4BA 1CLQA 4AKIA 4HCBA 3E4WA 1JW2A 3L1NA 4DTRA 3QEIA 4FJIA 3C6PB 2LF3A 3C95A 3SCXA 4FJ5A 4FJMA 1FZ0E 3QEVA 1XVBE 1N1CA 3UO3A 1FYZE 1XVDE 1WAJA 2B8IA 4JRQA 3HGLA 4M3ZA 1FZIE 4QNCA 4HCCA 4J2DA 1FXXA 2OZMA 2JH8A 3NGIA 3SQ0A 1XMGE 3RMCA 3L0MA 4FJ9A 4JRPA 4DTNA 2VJ4A 3RMBA 4KHNA 1XVGE 1FZ6E 1MHZG 1XMHE 4M3RA 3TAEA 2P5OA 1FZ8E 1XVFE 4KHYA 2P1PB 4ADOA 3OGLB 2OVPB 5H37A 3QETA 3TJYA 3SQ1A 4I9QA 4M42A 4M3WA 3RWUA 4DTUA 2VJ5A 4ADNA 3SNNA 1WAFA 1FS1A 3HL8A 4B08A 1FZ4E 3TL8B 3NDKA 3KD1E 4KHSA 4M3YA 3C94A 2DEBA 5IREA 4DTOA 4KHUA 3QNNA 4I9LA 1XMFE 3SPYA 4FJNA 1LDKE 3HP9A 3C6NB 4DU1A 4DTXA 3SI6A 3LZJA 3J2PA 3QEWA 2OZSA 2H4TA 2DTUA 3SJJA 3OGKB 1Q9XA 2VIXA 3MKSB 1Q9YA 1IH7A 3NE6A 2P5GA 4FJGA 3CFOA 1XVEE 3C6OB 4X5MA 4AI6A 3N1BA 3J27A 3UIQA 1P22A 3K2OA 4M3UA 3UO2A 4RNGA 2MMBA 4EYWA 4J2AA 3QEXA 2QXFA 2P1MB 4ICGC 3SUPA 3QEPA 4EPHA 4FJKA 3N1EA 2FW3A 3NAEA 4FVMA 3KD5E 4M3XA 4FK4A 2HD0A 4FK2A 3L2OB 3SPZA 2B1EA 2LF6A 4JS5A 4DTSA 4QNDA 1XU3E 5IBKB 4FJJA 2FYOA 1XVCE 4JS4A 1XU5E 4KI6A 3S9HA 2P1OB 2OVRB 3CQ8A 3SUNA 4FJLA 1FZHE 3WSOA 3SVIA 2OVQB 4E3SA 1FZ5E 3LDSA 4RG8A 3TAGA 4DTPA 2RCUA 1MTYG 4GAMC 4M45A 4KHQA 3QERA 3OGMB 3RMAA 4KHWA 5IZ7A 1XL3C 1MMOG 4DTJA 3QESA 2JPNA 4M41A 1IG9A 4FK0A 4I6JB 4J2EA 2MZWB 3BVOA 4RL5A 4DTMA 2P1QB 3CFRA 1FZ7E 2PFTA 2JHCA 2PFVA 3L8BA 3E4YA 4X5NA 4AKHA 3SQ4A 4M3TA 1MHYG 3HGKE 3LDBA 1FZ3E 4EP9A 3TAFA 3SQ2A 3RMDA 1FZ9E 4AKGA 4J2BA 2RKHA 1FZ1E 1NEXB 3V7DB 4IT5A 2E31A 2K5SA
chains in the Genus database with same CATH topology
3NHGA 1FZ2E 3LD8A 3SUOA 4FJHA 2B7MA 2ATQA 2JHAA 3SUQA 4FJ8A 2JHPA 2DY4A 2P1NB 2E32A 4FJ7A 4KI4A 3CFPA 3NCIA 3LZIA 4DU4A 3QNOA 4FJXA 3TABA 2OYQA 4DU3A 2YB5A 2JH9A 4E4BA 1CLQA 4AKIA 4HCBA 3E4WA 3L1NA 4DTRA 3QEIA 4FJIA 3C6PB 2LF3A 3C95A 3SCXA 4FJ5A 4FJMA 1FZ0E 3QEVA 1XVBE 1FYZE 1XVDE 1WAJA 2B8IA 4JRQA 3HGLA 4M3ZA 1FZIE 4QNCA 4HCCA 4J2DA 1FXXA 2OZMA 2JH8A 3NGIA 3SQ0A 1XMGE 3RMCA 3L0MA 4FJ9A 4JRPA 4DTNA 2VJ4A 3RMBA 4KHNA 1XVGE 1FZ6E 1MHZG 1XMHE 4M3RA 3TAEA 2P5OA 1FZ8E 1XVFE 4KHYA 2P1PB 4ADOA 3OGLB 2OVPB 5H37A 3QETA 3TJYA 3SQ1A 4I9QA 4M42A 4M3WA 3RWUA 4DTUA 2VJ5A 4ADNA 3SNNA 1WAFA 1FS1A 3HL8A 4B08A 1FZ4E 3TL8B 3NDKA 3KD1E 4KHSA 4M3YA 3C94A 2DEBA 5IREA 4DTOA 4KHUA 3QNNA 4I9LA 1XMFE 3SPYA 4FJNA 1LDKE 3HP9A 3C6NB 4DU1A 4DTXA 3SI6A 3LZJA 3J2PA 3QEWA 2OZSA 2H4TA 2DTUA 3SJJA 3OGKB 1Q9XA 2VIXA 3MKSB 1Q9YA 1IH7A 3NE6A 2P5GA 4FJGA 3CFOA 1XVEE 3C6OB 4X5MA 4AI6A 3N1BA 3J27A 3UIQA 1P22A 3K2OA 4M3UA 4RNGA 2MMBA 4EYWA 4J2AA 3QEXA 2QXFA 2P1MB 3SUPA 3QEPA 4EPHA 4FJKA 3N1EA 2FW3A 3NAEA 4FVMA 3KD5E 4M3XA 4FK4A 2HD0A 4FK2A 3L2OB 3SPZA 2B1EA 2LF6A 4JS5A 4DTSA 4QNDA 1XU3E 5IBKB 4FJJA 2FYOA 1XVCE 4JS4A 1XU5E 4KI6A 3S9HA 2P1OB 2OVRB 3CQ8A 3SUNA 4FJLA 1FZHE 3WSOA 3SVIA 2OVQB 4E3SA 1FZ5E 3LDSA 4RG8A 3TAGA 4DTPA 2RCUA 1MTYG 4GAMC 4M45A 4KHQA 3QERA 3OGMB 3RMAA 4KHWA 5IZ7A 1XL3C 1MMOG 4DTJA 3QESA 2JPNA 4M41A 1IG9A 4FK0A 4I6JB 4J2EA 2MZWB 4RL5A 4DTMA 2P1QB 3CFRA 1FZ7E 2PFTA 2JHCA 2PFVA 3L8BA 3E4YA 4X5NA 4AKHA 3SQ4A 4M3TA 1MHYG 3HGKE 3LDBA 1FZ3E 4EP9A 3TAFA 3SQ2A 3RMDA 1FZ9E 4AKGA 4J2BA 1FZ1E 1NEXB 3V7DB 2E31A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2B1E A;  4RL5 A;  2PFT A;  2PFV A;  2B7M A; 
#chains in the Genus database with same CATH topology
 3NHG A;  1FZ2 E;  2MW2 A;  3LD8 A;  3SUO A;  4FJH A;  2B7M A;  2ATQ A;  2JHA A;  3SUQ A;  4FJ8 A;  2JHP A;  2DY4 A;  2P1N B;  2E32 A;  1FPO A;  4FJ7 A;  4KI4 A;  3CFP A;  3NCI A;  3LZI A;  4DU4 A;  3QNO A;  4FJX A;  2JQT A;  3TAB A;  2OYQ A;  4DU3 A;  2YB5 A;  2JH9 A;  4E4B A;  1CLQ A;  4AKI A;  4HCB A;  3E4W A;  1JW2 A;  3L1N A;  4DTR A;  3QEI A;  4FJI A;  3C6P B;  2LF3 A;  3C95 A;  3SCX A;  4FJ5 A;  4FJM A;  1FZ0 E;  3QEV A;  1XVB E;  1N1C A;  3UO3 A;  1FYZ E;  1XVD E;  1WAJ A;  2B8I A;  4JRQ A;  3HGL A;  4M3Z A;  1FZI E;  4QNC A;  4HCC A;  4J2D A;  1FXX A;  2OZM A;  2JH8 A;  3NGI A;  3SQ0 A;  1XMG E;  3RMC A;  3L0M A;  4FJ9 A;  4JRP A;  4DTN A;  2VJ4 A;  3RMB A;  4KHN A;  1XVG E;  1FZ6 E;  1MHZ G;  1XMH E;  4M3R A;  3TAE A;  2P5O A;  1FZ8 E;  1XVF E;  4KHY A;  2P1P B;  4ADO A;  3OGL B;  2OVP B;  5H37 A;  3QET A;  3TJY A;  3SQ1 A;  4I9Q A;  4M42 A;  4M3W A;  3RWU A;  4DTU A;  2VJ5 A;  4ADN A;  3SNN A;  1WAF A;  1FS1 A;  3HL8 A;  4B08 A;  1FZ4 E;  3TL8 B;  3NDK A;  3KD1 E;  4KHS A;  4M3Y A;  3C94 A;  2DEB A;  5IRE A;  4DTO A;  4KHU A;  3QNN A;  4I9L A;  1XMF E;  3SPY A;  4FJN A;  1LDK E;  3HP9 A;  3C6N B;  4DU1 A;  4DTX A;  3SI6 A;  3LZJ A;  3J2P A;  3QEW A;  2OZS A;  2H4T A;  2DTU A;  3SJJ A;  3OGK B;  1Q9X A;  2VIX A;  3MKS B;  1Q9Y A;  1IH7 A;  3NE6 A;  2P5G A;  4FJG A;  3CFO A;  1XVE E;  3C6O B;  4X5M A;  4AI6 A;  3N1B A;  3J27 A;  3UIQ A;  1P22 A;  3K2O A;  4M3U A;  3UO2 A;  4RNG A;  2MMB A;  4EYW A;  4J2A A;  3QEX A;  2QXF A;  2P1M B;  4ICG C;  3SUP A;  3QEP A;  4EPH A;  4FJK A;  3N1E A;  2FW3 A;  3NAE A;  4FVM A;  3KD5 E;  4M3X A;  4FK4 A;  2HD0 A;  4FK2 A;  3L2O B;  3SPZ A;  2B1E A;  2LF6 A;  4JS5 A;  4DTS A;  4QND A;  1XU3 E;  5IBK B;  4FJJ A;  2FYO A;  1XVC E;  4JS4 A;  1XU5 E;  4KI6 A;  3S9H A;  2P1O B;  2OVR B;  3CQ8 A;  3SUN A;  4FJL A;  1FZH E;  3WSO A;  3SVI A;  2OVQ B;  4E3S A;  1FZ5 E;  3LDS A;  4RG8 A;  3TAG A;  4DTP A;  2RCU A;  1MTY G;  4GAM C;  4M45 A;  4KHQ A;  3QER A;  3OGM B;  3RMA A;  4KHW A;  5IZ7 A;  1XL3 C;  1MMO G;  4DTJ A;  3QES A;  2JPN A;  4M41 A;  1IG9 A;  4FK0 A;  4I6J B;  4J2E A;  2MZW B;  3BVO A;  4RL5 A;  4DTM A;  2P1Q B;  3CFR A;  1FZ7 E;  2PFT A;  2JHC A;  2PFV A;  3L8B A;  3E4Y A;  4X5N A;  4AKH A;  3SQ4 A;  4M3T A;  1MHY G;  3HGK E;  3LDB A;  1FZ3 E;  4EP9 A;  3TAF A;  3SQ2 A;  3RMD A;  1FZ9 E;  4AKG A;  4J2B A;  2RKH A;  1FZ1 E;  1NEX B;  3V7D B;  4IT5 A;  2E31 A;  2K5S A; 
#chains in the Genus database with same CATH homology
 3NHG A;  1FZ2 E;  3LD8 A;  3SUO A;  4FJH A;  2B7M A;  2ATQ A;  2JHA A;  3SUQ A;  4FJ8 A;  2JHP A;  2DY4 A;  2P1N B;  2E32 A;  4FJ7 A;  4KI4 A;  3CFP A;  3NCI A;  3LZI A;  4DU4 A;  3QNO A;  4FJX A;  3TAB A;  2OYQ A;  4DU3 A;  2YB5 A;  2JH9 A;  4E4B A;  1CLQ A;  4AKI A;  4HCB A;  3E4W A;  3L1N A;  4DTR A;  3QEI A;  4FJI A;  3C6P B;  2LF3 A;  3C95 A;  3SCX A;  4FJ5 A;  4FJM A;  1FZ0 E;  3QEV A;  1XVB E;  1FYZ E;  1XVD E;  1WAJ A;  2B8I A;  4JRQ A;  3HGL A;  4M3Z A;  1FZI E;  4QNC A;  4HCC A;  4J2D A;  1FXX A;  2OZM A;  2JH8 A;  3NGI A;  3SQ0 A;  1XMG E;  3RMC A;  3L0M A;  4FJ9 A;  4JRP A;  4DTN A;  2VJ4 A;  3RMB A;  4KHN A;  1XVG E;  1FZ6 E;  1MHZ G;  1XMH E;  4M3R A;  3TAE A;  2P5O A;  1FZ8 E;  1XVF E;  4KHY A;  2P1P B;  4ADO A;  3OGL B;  2OVP B;  5H37 A;  3QET A;  3TJY A;  3SQ1 A;  4I9Q A;  4M42 A;  4M3W A;  3RWU A;  4DTU A;  2VJ5 A;  4ADN A;  3SNN A;  1WAF A;  1FS1 A;  3HL8 A;  4B08 A;  1FZ4 E;  3TL8 B;  3NDK A;  3KD1 E;  4KHS A;  4M3Y A;  3C94 A;  2DEB A;  5IRE A;  4DTO A;  4KHU A;  3QNN A;  4I9L A;  1XMF E;  3SPY A;  4FJN A;  1LDK E;  3HP9 A;  3C6N B;  4DU1 A;  4DTX A;  3SI6 A;  3LZJ A;  3J2P A;  3QEW A;  2OZS A;  2H4T A;  2DTU A;  3SJJ A;  3OGK B;  1Q9X A;  2VIX A;  3MKS B;  1Q9Y A;  1IH7 A;  3NE6 A;  2P5G A;  4FJG A;  3CFO A;  1XVE E;  3C6O B;  4X5M A;  4AI6 A;  3N1B A;  3J27 A;  3UIQ A;  1P22 A;  3K2O A;  4M3U A;  4RNG A;  2MMB A;  4EYW A;  4J2A A;  3QEX A;  2QXF A;  2P1M B;  3SUP A;  3QEP A;  4EPH A;  4FJK A;  3N1E A;  2FW3 A;  3NAE A;  4FVM A;  3KD5 E;  4M3X A;  4FK4 A;  2HD0 A;  4FK2 A;  3L2O B;  3SPZ A;  2B1E A;  2LF6 A;  4JS5 A;  4DTS A;  4QND A;  1XU3 E;  5IBK B;  4FJJ A;  2FYO A;  1XVC E;  4JS4 A;  1XU5 E;  4KI6 A;  3S9H A;  2P1O B;  2OVR B;  3CQ8 A;  3SUN A;  4FJL A;  1FZH E;  3WSO A;  3SVI A;  2OVQ B;  4E3S A;  1FZ5 E;  3LDS A;  4RG8 A;  3TAG A;  4DTP A;  2RCU A;  1MTY G;  4GAM C;  4M45 A;  4KHQ A;  3QER A;  3OGM B;  3RMA A;  4KHW A;  5IZ7 A;  1XL3 C;  1MMO G;  4DTJ A;  3QES A;  2JPN A;  4M41 A;  1IG9 A;  4FK0 A;  4I6J B;  4J2E A;  2MZW B;  4RL5 A;  4DTM A;  2P1Q B;  3CFR A;  1FZ7 E;  2PFT A;  2JHC A;  2PFV A;  3L8B A;  3E4Y A;  4X5N A;  4AKH A;  3SQ4 A;  4M3T A;  1MHY G;  3HGK E;  3LDB A;  1FZ3 E;  4EP9 A;  3TAF A;  3SQ2 A;  3RMD A;  1FZ9 E;  4AKG A;  4J2B A;  1FZ1 E;  1NEX B;  3V7D B;  2E31 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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