2BHAA

E. coli aminopeptidase p in complex with substrate
Total Genus 155
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
155
sequence length
440
structure length
440
Chain Sequence
SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center.
pubmed doi rcsb
molecule keywords XAA-PRO AMINOPEPTIDASE
source organism Escherichia coli
molecule tags Hydrolase
total genus 155
structure length 440
sequence length 440
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2005-01-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF05195 AMP_N Aminopeptidase P, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 2bhaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2bhaA02
2EVMA 4S00A 5CDVA 3PEBA 2V6CA 2BN7A 2Q96A 2MATA 1YVMA 4Z7MA 4IF7A 1WLRA 4KM3A 1A16A 2OKNA 3CB5A 1B6AA 1XGNA 2DFIA 4QR8A 4FLKA 2BWXA 1XGMA 5CDLA 2GGBA 4OOKA 4IKSA 1YW8A 1CHMA 4RGZ1 1BOAA 3PN9A 2GG7A 1QXWA 2GU7A 5D6EA 3PKDA 4EGEA 1YJ3A 4FLJA 1WBQA 3TAVA 4FKCA 4U69A 1M35A 4JUQA 4IECA 2BHBA 1XGSA 2OAZA 4IKTA 2GG8A 4IKRA 1YW7A 2GG0A 4FLIA 2GGCA 4IU6A 1KQ9A 3S6BA 1C23A 3TB5A 3RVAA 3D27A 4R60A 2BWVA 1KP0A 5CE6A 1WY2A 2Q94A 5CLSA 4A6WA 2NQ7A 2B3KA 2GU4A 3FMQA 3IG4A 2B3HA 2V3XA 2BWWA 3I7MA 4FO7A 1W7VA 1XNZA 1N51A 2BHDA 2V3ZA 1WKMA 4HXXA 4U73A 3MR1A 4PNCA 1WL6A 3IL0A 4ZWOA 4IDYA 4U6ZA 4U76A 3OOOA 4S01A 4ZWPA 2Q93A 4U6WA 2BHCA 3OVKA 3Q6DA 4A6VA 1C21A 3RORA 3BIQA 2BWYA 1KQ0A 1QZYA 4U6EA 2GG3A 2G6PA 2BWTA 5FCHA 2V3YA 1O0XA 2BHAA 1W2MA 2GG9A 2Q95A 3IU8A 3L24A 4IKUA 5JFRA 2GZ5A 2ZSGA 5CNXA 3BITA 2BWUA 1XGOA 3CTZA 1MATA 2BB7A 1C24A 3PKAA 1BN5A 5JHUA 3PKCA 2GG2A 4U70A 1C27A 3CB6A 4S2RP 4U75A 2EA4A 3MATA 2BH3A 2P9AA 2GG5A 2EVCA 4PV4A 3O5VA 2HOWA 2Q92A 2GA2A 4U6JA 1R5GA 2P98A 1QXZA 3MX6A 2BWSA 4U6CA 3BIPA 4RZZA 1JAWA 1YW9A 4B28A 2NQ6A 3FM3A 3IU7A 1PV9A 4ZNGA 4U71A 2IW2A 3PKEA 1WN1A 3PKBA 4FLLA 4FUKA 2GU5A 4S2TP 4FO8A 1Y1NA 5FCFA 5JI6A 2Q8KA 1C22A 5CDEA 2EA2A 5E5BA 2GTXA 1R5HA 3IU9A 1B59A 3QOCA 4IPAA 1WL9A 1R58A 2GU6A 2B3LA 2EVOA 5CIKA 4ZWUA 2P99A 3FMRA 5D6FA 4RZYA 1QXYA 5E2CA 3L7GA 4U1BA 2ADUA 4MATA
chains in the Genus database with same CATH superfamily
2EVMA 4S00A 5CDVA 3PEBA 2V6CA 2BN7A 2Q96A 2MATA 1YVMA 4Z7MA 4IF7A 1WLRA 4KM3A 1A16A 2OKNA 3CB5A 1B6AA 1XGNA 2DFIA 4QR8A 4FLKA 2BWXA 1XGMA 5CDLA 2GGBA 4OOKA 4IKSA 1YW8A 1CHMA 4RGZ1 1BOAA 3PN9A 2GG7A 1QXWA 2GU7A 5D6EA 3PKDA 4EGEA 1YJ3A 4FLJA 1WBQA 3TAVA 4FKCA 4U69A 1M35A 4JUQA 4IECA 2BHBA 1XGSA 2OAZA 4IKTA 2GG8A 4IKRA 1YW7A 2GG0A 4FLIA 2GGCA 4IU6A 1KQ9A 3S6BA 1C23A 3TB5A 3RVAA 3D27A 4R60A 2BWVA 1KP0A 5CE6A 1WY2A 2Q94A 5CLSA 4A6WA 2NQ7A 2B3KA 2GU4A 3FMQA 3IG4A 2B3HA 2V3XA 2BWWA 3I7MA 4FO7A 1W7VA 1XNZA 1N51A 2BHDA 2V3ZA 1WKMA 4HXXA 4U73A 3MR1A 4PNCA 1WL6A 3IL0A 4ZWOA 4IDYA 4U6ZA 4U76A 3OOOA 4S01A 4ZWPA 2Q93A 4U6WA 2BHCA 3OVKA 3Q6DA 4A6VA 1C21A 3RORA 3BIQA 2BWYA 1KQ0A 1QZYA 4U6EA 2GG3A 2G6PA 2BWTA 5FCHA 2V3YA 1O0XA 2BHAA 1W2MA 2GG9A 2Q95A 3IU8A 3L24A 4IKUA 5JFRA 2GZ5A 2ZSGA 5CNXA 3BITA 2BWUA 1XGOA 3CTZA 1MATA 2BB7A 1C24A 3PKAA 1BN5A 5JHUA 3PKCA 2GG2A 4U70A 1C27A 3CB6A 4S2RP 4U75A 2EA4A 3MATA 2BH3A 2P9AA 2GG5A 2EVCA 4PV4A 3O5VA 2HOWA 2Q92A 2GA2A 4U6JA 1R5GA 2P98A 1QXZA 3MX6A 2BWSA 4U6CA 3BIPA 4RZZA 1JAWA 1YW9A 4B28A 2NQ6A 3FM3A 3IU7A 1PV9A 4ZNGA 4U71A 2IW2A 3PKEA 1WN1A 3PKBA 4FLLA 4FUKA 2GU5A 4S2TP 4FO8A 1Y1NA 5FCFA 5JI6A 2Q8KA 1C22A 5CDEA 2EA2A 5E5BA 2GTXA 1R5HA 3IU9A 1B59A 3QOCA 4IPAA 1WL9A 1R58A 2GU6A 2B3LA 2EVOA 5CIKA 4ZWUA 2P99A 3FMRA 5D6FA 4RZYA 1QXYA 5E2CA 3L7GA 4U1BA 2ADUA 4MATA
chains in the Genus database with same CATH topology
2EVMA 4S00A 5CDVA 3PEBA 2V6CA 2BN7A 2Q96A 2MATA 1YVMA 4Z7MA 4IF7A 1WLRA 4KM3A 1A16A 2OKNA 3CB5A 1B6AA 1XGNA 2DFIA 4QR8A 4FLKA 2BWXA 1XGMA 5CDLA 2GGBA 4OOKA 4IKSA 1YW8A 1CHMA 4RGZ1 1BOAA 3PN9A 2GG7A 1QXWA 2GU7A 5D6EA 3PKDA 4EGEA 1YJ3A 4FLJA 1WBQA 3TAVA 4FKCA 4U69A 1M35A 4JUQA 4IECA 2BHBA 1XGSA 2OAZA 4IKTA 2GG8A 4IKRA 1YW7A 2GG0A 4FLIA 2GGCA 4IU6A 1KQ9A 3S6BA 1C23A 3TB5A 3RVAA 3D27A 4R60A 2BWVA 1KP0A 5CE6A 1WY2A 2Q94A 5CLSA 4A6WA 2NQ7A 2B3KA 2GU4A 3FMQA 3IG4A 2B3HA 2V3XA 2BWWA 3I7MA 4FO7A 1W7VA 1XNZA 1N51A 2BHDA 2V3ZA 1WKMA 4HXXA 4U73A 3MR1A 4PNCA 1WL6A 3IL0A 4ZWOA 4IDYA 4U6ZA 4U76A 3OOOA 4S01A 4ZWPA 2Q93A 4U6WA 2BHCA 3OVKA 3Q6DA 4A6VA 1C21A 3RORA 3BIQA 2BWYA 1KQ0A 1QZYA 4U6EA 2GG3A 2G6PA 2BWTA 5FCHA 2V3YA 1O0XA 2BHAA 1W2MA 2GG9A 2Q95A 3IU8A 3L24A 4IKUA 5JFRA 2GZ5A 2ZSGA 5CNXA 3BITA 2BWUA 1XGOA 3CTZA 1MATA 2BB7A 1C24A 3PKAA 1BN5A 5JHUA 3PKCA 2GG2A 4U70A 1C27A 3CB6A 4S2RP 4U75A 2EA4A 3MATA 2BH3A 2P9AA 2GG5A 2EVCA 4PV4A 3O5VA 2HOWA 2Q92A 2GA2A 4U6JA 1R5GA 2P98A 1QXZA 3MX6A 2BWSA 4U6CA 3BIPA 4RZZA 1JAWA 1YW9A 4B28A 2NQ6A 3FM3A 3IU7A 1PV9A 4ZNGA 4U71A 2IW2A 3PKEA 1WN1A 3PKBA 4FLLA 4FUKA 2GU5A 4S2TP 4FO8A 1Y1NA 5FCFA 5JI6A 2Q8KA 1C22A 5CDEA 2EA2A 5E5BA 2GTXA 1R5HA 3IU9A 1B59A 3QOCA 4IPAA 1WL9A 1R58A 2GU6A 2B3LA 2EVOA 5CIKA 4ZWUA 2P99A 3FMRA 5D6FA 4RZYA 1QXYA 5E2CA 3L7GA 4U1BA 2ADUA 4MATA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EVM A;  4S00 A;  5CDV A;  3PEB A;  2V6C A;  2BN7 A;  2Q96 A;  2MAT A;  1YVM A;  4Z7M A;  4IF7 A;  1WLR A;  4KM3 A;  1A16 A;  2OKN A;  3CB5 A;  1B6A A;  1XGN A;  2DFI A;  4QR8 A;  4FLK A;  2BWX A;  1XGM A;  5CDL A;  2GGB A;  4OOK A;  4IKS A;  1YW8 A;  1CHM A;  4RGZ 1;  1BOA A;  3PN9 A;  2GG7 A;  1QXW A;  2GU7 A;  5D6E A;  3PKD A;  4EGE A;  1YJ3 A;  4FLJ A;  1WBQ A;  3TAV A;  4FKC A;  4U69 A;  1M35 A;  4JUQ A;  4IEC A;  2BHB A;  1XGS A;  2OAZ A;  4IKT A;  2GG8 A;  4IKR A;  1YW7 A;  2GG0 A;  4FLI A;  2GGC A;  4IU6 A;  1KQ9 A;  3S6B A;  1C23 A;  3TB5 A;  3RVA A;  3D27 A;  4R60 A;  2BWV A;  1KP0 A;  5CE6 A;  1WY2 A;  2Q94 A;  5CLS A;  4A6W A;  2NQ7 A;  2B3K A;  2GU4 A;  3FMQ A;  3IG4 A;  2B3H A;  2V3X A;  2BWW A;  3I7M A;  4FO7 A;  1W7V A;  1XNZ A;  1N51 A;  2BHD A;  2V3Z A;  1WKM A;  4HXX A;  4U73 A;  3MR1 A;  4PNC A;  1WL6 A;  3IL0 A;  4ZWO A;  4IDY A;  4U6Z A;  4U76 A;  3OOO A;  4S01 A;  4ZWP A;  2Q93 A;  4U6W A;  2BHC A;  3OVK A;  3Q6D A;  4A6V A;  1C21 A;  3ROR A;  3BIQ A;  2BWY A;  1KQ0 A;  1QZY A;  4U6E A;  2GG3 A;  2G6P A;  2BWT A;  5FCH A;  2V3Y A;  1O0X A;  2BHA A;  1W2M A;  2GG9 A;  2Q95 A;  3IU8 A;  3L24 A;  4IKU A;  5JFR A;  2GZ5 A;  2ZSG A;  5CNX A;  3BIT A;  2BWU A;  1XGO A;  3CTZ A;  1MAT A;  2BB7 A;  1C24 A;  3PKA A;  1BN5 A;  5JHU A;  3PKC A;  2GG2 A;  4U70 A;  1C27 A;  3CB6 A;  4S2R P;  4U75 A;  2EA4 A;  3MAT A;  2BH3 A;  2P9A A;  2GG5 A;  2EVC A;  4PV4 A;  3O5V A;  2HOW A;  2Q92 A;  2GA2 A;  4U6J A;  1R5G A;  2P98 A;  1QXZ A;  3MX6 A;  2BWS A;  4U6C A;  3BIP A;  4RZZ A;  1JAW A;  1YW9 A;  4B28 A;  2NQ6 A;  3FM3 A;  3IU7 A;  1PV9 A;  4ZNG A;  4U71 A;  2IW2 A;  3PKE A;  1WN1 A;  3PKB A;  4FLL A;  4FUK A;  2GU5 A;  4S2T P;  4FO8 A;  1Y1N A;  5FCF A;  5JI6 A;  2Q8K A;  1C22 A;  5CDE A;  2EA2 A;  5E5B A;  2GTX A;  1R5H A;  3IU9 A;  1B59 A;  3QOC A;  4IPA A;  1WL9 A;  1R58 A;  2GU6 A;  2B3L A;  2EVO A;  5CIK A;  4ZWU A;  2P99 A;  3FMR A;  5D6F A;  4RZY A;  1QXY A;  5E2C A;  3L7G A;  4U1B A;  2ADU A;  4MAT A; 
#chains in the Genus database with same CATH topology
 2EVM A;  4S00 A;  5CDV A;  3PEB A;  2V6C A;  2BN7 A;  2Q96 A;  2MAT A;  1YVM A;  4Z7M A;  4IF7 A;  1WLR A;  4KM3 A;  1A16 A;  2OKN A;  3CB5 A;  1B6A A;  1XGN A;  2DFI A;  4QR8 A;  4FLK A;  2BWX A;  1XGM A;  5CDL A;  2GGB A;  4OOK A;  4IKS A;  1YW8 A;  1CHM A;  4RGZ 1;  1BOA A;  3PN9 A;  2GG7 A;  1QXW A;  2GU7 A;  5D6E A;  3PKD A;  4EGE A;  1YJ3 A;  4FLJ A;  1WBQ A;  3TAV A;  4FKC A;  4U69 A;  1M35 A;  4JUQ A;  4IEC A;  2BHB A;  1XGS A;  2OAZ A;  4IKT A;  2GG8 A;  4IKR A;  1YW7 A;  2GG0 A;  4FLI A;  2GGC A;  4IU6 A;  1KQ9 A;  3S6B A;  1C23 A;  3TB5 A;  3RVA A;  3D27 A;  4R60 A;  2BWV A;  1KP0 A;  5CE6 A;  1WY2 A;  2Q94 A;  5CLS A;  4A6W A;  2NQ7 A;  2B3K A;  2GU4 A;  3FMQ A;  3IG4 A;  2B3H A;  2V3X A;  2BWW A;  3I7M A;  4FO7 A;  1W7V A;  1XNZ A;  1N51 A;  2BHD A;  2V3Z A;  1WKM A;  4HXX A;  4U73 A;  3MR1 A;  4PNC A;  1WL6 A;  3IL0 A;  4ZWO A;  4IDY A;  4U6Z A;  4U76 A;  3OOO A;  4S01 A;  4ZWP A;  2Q93 A;  4U6W A;  2BHC A;  3OVK A;  3Q6D A;  4A6V A;  1C21 A;  3ROR A;  3BIQ A;  2BWY A;  1KQ0 A;  1QZY A;  4U6E A;  2GG3 A;  2G6P A;  2BWT A;  5FCH A;  2V3Y A;  1O0X A;  2BHA A;  1W2M A;  2GG9 A;  2Q95 A;  3IU8 A;  3L24 A;  4IKU A;  5JFR A;  2GZ5 A;  2ZSG A;  5CNX A;  3BIT A;  2BWU A;  1XGO A;  3CTZ A;  1MAT A;  2BB7 A;  1C24 A;  3PKA A;  1BN5 A;  5JHU A;  3PKC A;  2GG2 A;  4U70 A;  1C27 A;  3CB6 A;  4S2R P;  4U75 A;  2EA4 A;  3MAT A;  2BH3 A;  2P9A A;  2GG5 A;  2EVC A;  4PV4 A;  3O5V A;  2HOW A;  2Q92 A;  2GA2 A;  4U6J A;  1R5G A;  2P98 A;  1QXZ A;  3MX6 A;  2BWS A;  4U6C A;  3BIP A;  4RZZ A;  1JAW A;  1YW9 A;  4B28 A;  2NQ6 A;  3FM3 A;  3IU7 A;  1PV9 A;  4ZNG A;  4U71 A;  2IW2 A;  3PKE A;  1WN1 A;  3PKB A;  4FLL A;  4FUK A;  2GU5 A;  4S2T P;  4FO8 A;  1Y1N A;  5FCF A;  5JI6 A;  2Q8K A;  1C22 A;  5CDE A;  2EA2 A;  5E5B A;  2GTX A;  1R5H A;  3IU9 A;  1B59 A;  3QOC A;  4IPA A;  1WL9 A;  1R58 A;  2GU6 A;  2B3L A;  2EVO A;  5CIK A;  4ZWU A;  2P99 A;  3FMR A;  5D6F A;  4RZY A;  1QXY A;  5E2C A;  3L7G A;  4U1B A;  2ADU A;  4MAT A; 
#chains in the Genus database with same CATH homology
 2EVM A;  4S00 A;  5CDV A;  3PEB A;  2V6C A;  2BN7 A;  2Q96 A;  2MAT A;  1YVM A;  4Z7M A;  4IF7 A;  1WLR A;  4KM3 A;  1A16 A;  2OKN A;  3CB5 A;  1B6A A;  1XGN A;  2DFI A;  4QR8 A;  4FLK A;  2BWX A;  1XGM A;  5CDL A;  2GGB A;  4OOK A;  4IKS A;  1YW8 A;  1CHM A;  4RGZ 1;  1BOA A;  3PN9 A;  2GG7 A;  1QXW A;  2GU7 A;  5D6E A;  3PKD A;  4EGE A;  1YJ3 A;  4FLJ A;  1WBQ A;  3TAV A;  4FKC A;  4U69 A;  1M35 A;  4JUQ A;  4IEC A;  2BHB A;  1XGS A;  2OAZ A;  4IKT A;  2GG8 A;  4IKR A;  1YW7 A;  2GG0 A;  4FLI A;  2GGC A;  4IU6 A;  1KQ9 A;  3S6B A;  1C23 A;  3TB5 A;  3RVA A;  3D27 A;  4R60 A;  2BWV A;  1KP0 A;  5CE6 A;  1WY2 A;  2Q94 A;  5CLS A;  4A6W A;  2NQ7 A;  2B3K A;  2GU4 A;  3FMQ A;  3IG4 A;  2B3H A;  2V3X A;  2BWW A;  3I7M A;  4FO7 A;  1W7V A;  1XNZ A;  1N51 A;  2BHD A;  2V3Z A;  1WKM A;  4HXX A;  4U73 A;  3MR1 A;  4PNC A;  1WL6 A;  3IL0 A;  4ZWO A;  4IDY A;  4U6Z A;  4U76 A;  3OOO A;  4S01 A;  4ZWP A;  2Q93 A;  4U6W A;  2BHC A;  3OVK A;  3Q6D A;  4A6V A;  1C21 A;  3ROR A;  3BIQ A;  2BWY A;  1KQ0 A;  1QZY A;  4U6E A;  2GG3 A;  2G6P A;  2BWT A;  5FCH A;  2V3Y A;  1O0X A;  2BHA A;  1W2M A;  2GG9 A;  2Q95 A;  3IU8 A;  3L24 A;  4IKU A;  5JFR A;  2GZ5 A;  2ZSG A;  5CNX A;  3BIT A;  2BWU A;  1XGO A;  3CTZ A;  1MAT A;  2BB7 A;  1C24 A;  3PKA A;  1BN5 A;  5JHU A;  3PKC A;  2GG2 A;  4U70 A;  1C27 A;  3CB6 A;  4S2R P;  4U75 A;  2EA4 A;  3MAT A;  2BH3 A;  2P9A A;  2GG5 A;  2EVC A;  4PV4 A;  3O5V A;  2HOW A;  2Q92 A;  2GA2 A;  4U6J A;  1R5G A;  2P98 A;  1QXZ A;  3MX6 A;  2BWS A;  4U6C A;  3BIP A;  4RZZ A;  1JAW A;  1YW9 A;  4B28 A;  2NQ6 A;  3FM3 A;  3IU7 A;  1PV9 A;  4ZNG A;  4U71 A;  2IW2 A;  3PKE A;  1WN1 A;  3PKB A;  4FLL A;  4FUK A;  2GU5 A;  4S2T P;  4FO8 A;  1Y1N A;  5FCF A;  5JI6 A;  2Q8K A;  1C22 A;  5CDE A;  2EA2 A;  5E5B A;  2GTX A;  1R5H A;  3IU9 A;  1B59 A;  3QOC A;  4IPA A;  1WL9 A;  1R58 A;  2GU6 A;  2B3L A;  2EVO A;  5CIK A;  4ZWU A;  2P99 A;  3FMR A;  5D6F A;  4RZY A;  1QXY A;  5E2C A;  3L7G A;  4U1B A;  2ADU A;  4MAT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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