2BHAA

E. coli aminopeptidase p in complex with substrate
Total Genus 155
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
155
sequence length
440
structure length
440
Chain Sequence
SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Escherichia coli
publication title Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center.
pubmed doi rcsb
molecule keywords XAA-PRO AMINOPEPTIDASE
total genus 155
structure length 440
sequence length 440
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2005-01-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF05195 AMP_N Aminopeptidase P, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 2bhaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2bhaA02
4MATA 2BWVA 2NQ6A 4IDYA 2GU6A 2EVOA 4S2RP 4FKCA 1W7VA 2BWUA 2EA4A 3PKCA 4KM3A 1WKMA 4U76A 2IW2A 4FO7A 1WBQA 5D6FA 1QZYA 4FLLA 4RZZA 1C27A 1XGMA 2EVCA 4QR8A 2GZ5A 3FMRA 4IKRA 2BWWA 4OOKA 1YW9A 1XGSA 2Q94A 1YJ3A 3IU7A 5JFRA 1YVMA 4S00A 1Y1NA 4U73A 4FO8A 4U6JA 3MR1A 3Q6DA 5CE6A 2Q8KA 4A6VA 3RORA 1YW7A 2NQ7A 3TAVA 2ADUA 1WLRA 5CDLA 3CB5A 4IKUA 1WL9A 1XNZA 5JHUA 4ZWPA 3S6BA 2GG8A 2P9AA 3IL0A 4FLIA 4IF7A 1B6AA 1BOAA 2GGBA 4RZYA 2P99A 4B28A 2BB7A 2OAZA 5D6EA 2EVMA 1WL6A 3RVAA 1R58A 5FCFA 2GTXA 4RGZ1 3L7GA 2GGCA 1CHMA 4EGEA 1WY2A 2GU5A 1KP0A 2V3XA 2ZSGA 1R5GA 2P98A 1WN1A 2BWXA 1C21A 2Q96A 2Q92A 1YW8A 3FMQA 3PKAA 4PV4A 3PKBA 4IU6A 2B3HA 1QXZA 2Q93A 2EA2A 5CNXA 4JUQA 5FCHA 2V6CA 3IG4A 1C24A 5CDVA 3QOCA 3CB6A 5JI6A 4S01A 4IKTA 4U1BA 1B59A 3IU9A 5E5BA 1KQ9A 2GA2A 4ZWUA 3D27A 5CLSA 3OOOA 1A16A 2HOWA 1W2MA 1C22A 4FUKA 4Z7MA 4IKSA 3BIQA 1JAWA 4U71A 3L24A 2OKNA 5CDEA 4U69A 2BHDA 1MATA 2MATA 2GG5A 2V3ZA 3OVKA 3BIPA 2GG9A 3TB5A 1XGNA 4U70A 1C23A 2B3KA 4S2TP 3O5VA 4A6WA 1XGOA 2GG3A 2BHCA 1M35A 1QXWA 4ZWOA 3BITA 2GG0A 5E2CA 3PKDA 3MX6A 3FM3A 2BHAA 2V3YA 4FLJA 2B3LA 3IU8A 2Q95A 1N51A 4U6ZA 2BHBA 2BWYA 3PN9A 4ZNGA 4IECA 4IPAA 4U6EA 2BH3A 1QXYA 3PEBA 3MATA 4HXXA 4U75A 1KQ0A 4U6WA 4R60A 4PNCA 1O0XA 4U6CA 3CTZA 2BWSA 2DFIA 2GG2A 2GG7A 2GU4A 2GU7A 2G6PA 3I7MA 1BN5A 3PKEA 1R5HA 5CIKA 4FLKA 2BN7A 2BWTA 1PV9A
chains in the Genus database with same CATH superfamily
4MATA 2BWVA 2NQ6A 4IDYA 2GU6A 2EVOA 4S2RP 4FKCA 1W7VA 2BWUA 2EA4A 3PKCA 4KM3A 1WKMA 4U76A 2IW2A 4FO7A 1WBQA 5D6FA 1QZYA 4FLLA 4RZZA 1C27A 1XGMA 2EVCA 4QR8A 2GZ5A 3FMRA 4IKRA 2BWWA 4OOKA 1YW9A 1XGSA 2Q94A 1YJ3A 3IU7A 5JFRA 1YVMA 4S00A 1Y1NA 4U73A 4FO8A 4U6JA 3MR1A 3Q6DA 5CE6A 2Q8KA 4A6VA 3RORA 1YW7A 2NQ7A 3TAVA 2ADUA 1WLRA 5CDLA 3CB5A 4IKUA 1WL9A 1XNZA 5JHUA 4ZWPA 3S6BA 2GG8A 2P9AA 3IL0A 4FLIA 4IF7A 1B6AA 1BOAA 2GGBA 4RZYA 2P99A 4B28A 2BB7A 2OAZA 5D6EA 2EVMA 1WL6A 3RVAA 1R58A 5FCFA 2GTXA 4RGZ1 3L7GA 2GGCA 1CHMA 4EGEA 1WY2A 2GU5A 1KP0A 2V3XA 2ZSGA 1R5GA 2P98A 1WN1A 2BWXA 1C21A 2Q96A 2Q92A 1YW8A 3FMQA 3PKAA 4PV4A 3PKBA 4IU6A 2B3HA 1QXZA 2Q93A 2EA2A 5CNXA 4JUQA 5FCHA 2V6CA 3IG4A 1C24A 5CDVA 3QOCA 3CB6A 5JI6A 4S01A 4IKTA 4U1BA 1B59A 3IU9A 5E5BA 1KQ9A 2GA2A 4ZWUA 3D27A 5CLSA 3OOOA 1A16A 2HOWA 1W2MA 1C22A 4FUKA 4Z7MA 4IKSA 3BIQA 1JAWA 4U71A 3L24A 2OKNA 5CDEA 4U69A 2BHDA 1MATA 2MATA 2GG5A 2V3ZA 3OVKA 3BIPA 2GG9A 3TB5A 1XGNA 4U70A 1C23A 2B3KA 4S2TP 3O5VA 4A6WA 1XGOA 2GG3A 2BHCA 1M35A 1QXWA 4ZWOA 3BITA 2GG0A 5E2CA 3PKDA 3MX6A 3FM3A 2BHAA 2V3YA 4FLJA 2B3LA 3IU8A 2Q95A 1N51A 4U6ZA 2BHBA 2BWYA 3PN9A 4ZNGA 4IECA 4IPAA 4U6EA 2BH3A 1QXYA 3PEBA 3MATA 4HXXA 4U75A 1KQ0A 4U6WA 4R60A 4PNCA 1O0XA 4U6CA 3CTZA 2BWSA 2DFIA 2GG2A 2GG7A 2GU4A 2GU7A 2G6PA 3I7MA 1BN5A 3PKEA 1R5HA 5CIKA 4FLKA 2BN7A 2BWTA 1PV9A
chains in the Genus database with same CATH topology
4MATA 2BWVA 2NQ6A 4IDYA 2GU6A 2EVOA 4S2RP 4FKCA 1W7VA 2BWUA 2EA4A 3PKCA 4KM3A 1WKMA 4U76A 2IW2A 4FO7A 1WBQA 5D6FA 1QZYA 4FLLA 4RZZA 1C27A 1XGMA 2EVCA 4QR8A 2GZ5A 3FMRA 4IKRA 2BWWA 4OOKA 1YW9A 1XGSA 2Q94A 1YJ3A 3IU7A 5JFRA 1YVMA 4S00A 1Y1NA 4U73A 4FO8A 4U6JA 3MR1A 3Q6DA 5CE6A 2Q8KA 4A6VA 3RORA 1YW7A 2NQ7A 3TAVA 2ADUA 1WLRA 5CDLA 3CB5A 4IKUA 1WL9A 1XNZA 5JHUA 4ZWPA 3S6BA 2GG8A 2P9AA 3IL0A 4FLIA 4IF7A 1B6AA 1BOAA 2GGBA 4RZYA 2P99A 4B28A 2BB7A 2OAZA 5D6EA 2EVMA 1WL6A 3RVAA 1R58A 5FCFA 2GTXA 4RGZ1 3L7GA 2GGCA 1CHMA 4EGEA 1WY2A 2GU5A 1KP0A 2V3XA 2ZSGA 1R5GA 2P98A 1WN1A 2BWXA 1C21A 2Q96A 2Q92A 1YW8A 3FMQA 3PKAA 4PV4A 3PKBA 4IU6A 2B3HA 1QXZA 2Q93A 2EA2A 5CNXA 4JUQA 5FCHA 2V6CA 3IG4A 1C24A 5CDVA 3QOCA 3CB6A 5JI6A 4S01A 4IKTA 4U1BA 1B59A 3IU9A 5E5BA 1KQ9A 2GA2A 4ZWUA 3D27A 5CLSA 3OOOA 1A16A 2HOWA 1W2MA 1C22A 4FUKA 4Z7MA 4IKSA 3BIQA 1JAWA 4U71A 3L24A 2OKNA 5CDEA 4U69A 2BHDA 1MATA 2MATA 2GG5A 2V3ZA 3OVKA 3BIPA 2GG9A 3TB5A 1XGNA 4U70A 1C23A 2B3KA 4S2TP 3O5VA 4A6WA 1XGOA 2GG3A 2BHCA 1M35A 1QXWA 4ZWOA 3BITA 2GG0A 5E2CA 3PKDA 3MX6A 3FM3A 2BHAA 2V3YA 4FLJA 2B3LA 3IU8A 2Q95A 1N51A 4U6ZA 2BHBA 2BWYA 3PN9A 4ZNGA 4IECA 4IPAA 4U6EA 2BH3A 1QXYA 3PEBA 3MATA 4HXXA 4U75A 1KQ0A 4U6WA 4R60A 4PNCA 1O0XA 4U6CA 3CTZA 2BWSA 2DFIA 2GG2A 2GG7A 2GU4A 2GU7A 2G6PA 3I7MA 1BN5A 3PKEA 1R5HA 5CIKA 4FLKA 2BN7A 2BWTA 1PV9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4MAT A;  2BWV A;  2NQ6 A;  4IDY A;  2GU6 A;  2EVO A;  4S2R P;  4FKC A;  1W7V A;  2BWU A;  2EA4 A;  3PKC A;  4KM3 A;  1WKM A;  4U76 A;  2IW2 A;  4FO7 A;  1WBQ A;  5D6F A;  1QZY A;  4FLL A;  4RZZ A;  1C27 A;  1XGM A;  2EVC A;  4QR8 A;  2GZ5 A;  3FMR A;  4IKR A;  2BWW A;  4OOK A;  1YW9 A;  1XGS A;  2Q94 A;  1YJ3 A;  3IU7 A;  5JFR A;  1YVM A;  4S00 A;  1Y1N A;  4U73 A;  4FO8 A;  4U6J A;  3MR1 A;  3Q6D A;  5CE6 A;  2Q8K A;  4A6V A;  3ROR A;  1YW7 A;  2NQ7 A;  3TAV A;  2ADU A;  1WLR A;  5CDL A;  3CB5 A;  4IKU A;  1WL9 A;  1XNZ A;  5JHU A;  4ZWP A;  3S6B A;  2GG8 A;  2P9A A;  3IL0 A;  4FLI A;  4IF7 A;  1B6A A;  1BOA A;  2GGB A;  4RZY A;  2P99 A;  4B28 A;  2BB7 A;  2OAZ A;  5D6E A;  2EVM A;  1WL6 A;  3RVA A;  1R58 A;  5FCF A;  2GTX A;  4RGZ 1;  3L7G A;  2GGC A;  1CHM A;  4EGE A;  1WY2 A;  2GU5 A;  1KP0 A;  2V3X A;  2ZSG A;  1R5G A;  2P98 A;  1WN1 A;  2BWX A;  1C21 A;  2Q96 A;  2Q92 A;  1YW8 A;  3FMQ A;  3PKA A;  4PV4 A;  3PKB A;  4IU6 A;  2B3H A;  1QXZ A;  2Q93 A;  2EA2 A;  5CNX A;  4JUQ A;  5FCH A;  2V6C A;  3IG4 A;  1C24 A;  5CDV A;  3QOC A;  3CB6 A;  5JI6 A;  4S01 A;  4IKT A;  4U1B A;  1B59 A;  3IU9 A;  5E5B A;  1KQ9 A;  2GA2 A;  4ZWU A;  3D27 A;  5CLS A;  3OOO A;  1A16 A;  2HOW A;  1W2M A;  1C22 A;  4FUK A;  4Z7M A;  4IKS A;  3BIQ A;  1JAW A;  4U71 A;  3L24 A;  2OKN A;  5CDE A;  4U69 A;  2BHD A;  1MAT A;  2MAT A;  2GG5 A;  2V3Z A;  3OVK A;  3BIP A;  2GG9 A;  3TB5 A;  1XGN A;  4U70 A;  1C23 A;  2B3K A;  4S2T P;  3O5V A;  4A6W A;  1XGO A;  2GG3 A;  2BHC A;  1M35 A;  1QXW A;  4ZWO A;  3BIT A;  2GG0 A;  5E2C A;  3PKD A;  3MX6 A;  3FM3 A;  2BHA A;  2V3Y A;  4FLJ A;  2B3L A;  3IU8 A;  2Q95 A;  1N51 A;  4U6Z A;  2BHB A;  2BWY A;  3PN9 A;  4ZNG A;  4IEC A;  4IPA A;  4U6E A;  2BH3 A;  1QXY A;  3PEB A;  3MAT A;  4HXX A;  4U75 A;  1KQ0 A;  4U6W A;  4R60 A;  4PNC A;  1O0X A;  4U6C A;  3CTZ A;  2BWS A;  2DFI A;  2GG2 A;  2GG7 A;  2GU4 A;  2GU7 A;  2G6P A;  3I7M A;  1BN5 A;  3PKE A;  1R5H A;  5CIK A;  4FLK A;  2BN7 A;  2BWT A;  1PV9 A; 
#chains in the Genus database with same CATH topology
 4MAT A;  2BWV A;  2NQ6 A;  4IDY A;  2GU6 A;  2EVO A;  4S2R P;  4FKC A;  1W7V A;  2BWU A;  2EA4 A;  3PKC A;  4KM3 A;  1WKM A;  4U76 A;  2IW2 A;  4FO7 A;  1WBQ A;  5D6F A;  1QZY A;  4FLL A;  4RZZ A;  1C27 A;  1XGM A;  2EVC A;  4QR8 A;  2GZ5 A;  3FMR A;  4IKR A;  2BWW A;  4OOK A;  1YW9 A;  1XGS A;  2Q94 A;  1YJ3 A;  3IU7 A;  5JFR A;  1YVM A;  4S00 A;  1Y1N A;  4U73 A;  4FO8 A;  4U6J A;  3MR1 A;  3Q6D A;  5CE6 A;  2Q8K A;  4A6V A;  3ROR A;  1YW7 A;  2NQ7 A;  3TAV A;  2ADU A;  1WLR A;  5CDL A;  3CB5 A;  4IKU A;  1WL9 A;  1XNZ A;  5JHU A;  4ZWP A;  3S6B A;  2GG8 A;  2P9A A;  3IL0 A;  4FLI A;  4IF7 A;  1B6A A;  1BOA A;  2GGB A;  4RZY A;  2P99 A;  4B28 A;  2BB7 A;  2OAZ A;  5D6E A;  2EVM A;  1WL6 A;  3RVA A;  1R58 A;  5FCF A;  2GTX A;  4RGZ 1;  3L7G A;  2GGC A;  1CHM A;  4EGE A;  1WY2 A;  2GU5 A;  1KP0 A;  2V3X A;  2ZSG A;  1R5G A;  2P98 A;  1WN1 A;  2BWX A;  1C21 A;  2Q96 A;  2Q92 A;  1YW8 A;  3FMQ A;  3PKA A;  4PV4 A;  3PKB A;  4IU6 A;  2B3H A;  1QXZ A;  2Q93 A;  2EA2 A;  5CNX A;  4JUQ A;  5FCH A;  2V6C A;  3IG4 A;  1C24 A;  5CDV A;  3QOC A;  3CB6 A;  5JI6 A;  4S01 A;  4IKT A;  4U1B A;  1B59 A;  3IU9 A;  5E5B A;  1KQ9 A;  2GA2 A;  4ZWU A;  3D27 A;  5CLS A;  3OOO A;  1A16 A;  2HOW A;  1W2M A;  1C22 A;  4FUK A;  4Z7M A;  4IKS A;  3BIQ A;  1JAW A;  4U71 A;  3L24 A;  2OKN A;  5CDE A;  4U69 A;  2BHD A;  1MAT A;  2MAT A;  2GG5 A;  2V3Z A;  3OVK A;  3BIP A;  2GG9 A;  3TB5 A;  1XGN A;  4U70 A;  1C23 A;  2B3K A;  4S2T P;  3O5V A;  4A6W A;  1XGO A;  2GG3 A;  2BHC A;  1M35 A;  1QXW A;  4ZWO A;  3BIT A;  2GG0 A;  5E2C A;  3PKD A;  3MX6 A;  3FM3 A;  2BHA A;  2V3Y A;  4FLJ A;  2B3L A;  3IU8 A;  2Q95 A;  1N51 A;  4U6Z A;  2BHB A;  2BWY A;  3PN9 A;  4ZNG A;  4IEC A;  4IPA A;  4U6E A;  2BH3 A;  1QXY A;  3PEB A;  3MAT A;  4HXX A;  4U75 A;  1KQ0 A;  4U6W A;  4R60 A;  4PNC A;  1O0X A;  4U6C A;  3CTZ A;  2BWS A;  2DFI A;  2GG2 A;  2GG7 A;  2GU4 A;  2GU7 A;  2G6P A;  3I7M A;  1BN5 A;  3PKE A;  1R5H A;  5CIK A;  4FLK A;  2BN7 A;  2BWT A;  1PV9 A; 
#chains in the Genus database with same CATH homology
 4MAT A;  2BWV A;  2NQ6 A;  4IDY A;  2GU6 A;  2EVO A;  4S2R P;  4FKC A;  1W7V A;  2BWU A;  2EA4 A;  3PKC A;  4KM3 A;  1WKM A;  4U76 A;  2IW2 A;  4FO7 A;  1WBQ A;  5D6F A;  1QZY A;  4FLL A;  4RZZ A;  1C27 A;  1XGM A;  2EVC A;  4QR8 A;  2GZ5 A;  3FMR A;  4IKR A;  2BWW A;  4OOK A;  1YW9 A;  1XGS A;  2Q94 A;  1YJ3 A;  3IU7 A;  5JFR A;  1YVM A;  4S00 A;  1Y1N A;  4U73 A;  4FO8 A;  4U6J A;  3MR1 A;  3Q6D A;  5CE6 A;  2Q8K A;  4A6V A;  3ROR A;  1YW7 A;  2NQ7 A;  3TAV A;  2ADU A;  1WLR A;  5CDL A;  3CB5 A;  4IKU A;  1WL9 A;  1XNZ A;  5JHU A;  4ZWP A;  3S6B A;  2GG8 A;  2P9A A;  3IL0 A;  4FLI A;  4IF7 A;  1B6A A;  1BOA A;  2GGB A;  4RZY A;  2P99 A;  4B28 A;  2BB7 A;  2OAZ A;  5D6E A;  2EVM A;  1WL6 A;  3RVA A;  1R58 A;  5FCF A;  2GTX A;  4RGZ 1;  3L7G A;  2GGC A;  1CHM A;  4EGE A;  1WY2 A;  2GU5 A;  1KP0 A;  2V3X A;  2ZSG A;  1R5G A;  2P98 A;  1WN1 A;  2BWX A;  1C21 A;  2Q96 A;  2Q92 A;  1YW8 A;  3FMQ A;  3PKA A;  4PV4 A;  3PKB A;  4IU6 A;  2B3H A;  1QXZ A;  2Q93 A;  2EA2 A;  5CNX A;  4JUQ A;  5FCH A;  2V6C A;  3IG4 A;  1C24 A;  5CDV A;  3QOC A;  3CB6 A;  5JI6 A;  4S01 A;  4IKT A;  4U1B A;  1B59 A;  3IU9 A;  5E5B A;  1KQ9 A;  2GA2 A;  4ZWU A;  3D27 A;  5CLS A;  3OOO A;  1A16 A;  2HOW A;  1W2M A;  1C22 A;  4FUK A;  4Z7M A;  4IKS A;  3BIQ A;  1JAW A;  4U71 A;  3L24 A;  2OKN A;  5CDE A;  4U69 A;  2BHD A;  1MAT A;  2MAT A;  2GG5 A;  2V3Z A;  3OVK A;  3BIP A;  2GG9 A;  3TB5 A;  1XGN A;  4U70 A;  1C23 A;  2B3K A;  4S2T P;  3O5V A;  4A6W A;  1XGO A;  2GG3 A;  2BHC A;  1M35 A;  1QXW A;  4ZWO A;  3BIT A;  2GG0 A;  5E2C A;  3PKD A;  3MX6 A;  3FM3 A;  2BHA A;  2V3Y A;  4FLJ A;  2B3L A;  3IU8 A;  2Q95 A;  1N51 A;  4U6Z A;  2BHB A;  2BWY A;  3PN9 A;  4ZNG A;  4IEC A;  4IPA A;  4U6E A;  2BH3 A;  1QXY A;  3PEB A;  3MAT A;  4HXX A;  4U75 A;  1KQ0 A;  4U6W A;  4R60 A;  4PNC A;  1O0X A;  4U6C A;  3CTZ A;  2BWS A;  2DFI A;  2GG2 A;  2GG7 A;  2GU4 A;  2GU7 A;  2G6P A;  3I7M A;  1BN5 A;  3PKE A;  1R5H A;  5CIK A;  4FLK A;  2BN7 A;  2BWT A;  1PV9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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