2BM6A

The structure of mfpa (rv3361c, c2221 crystal form). the pentapeptide repeat protein from mycobacterium tuberculosis folds as a right- handed quadrilateral beta-helix.
Total Genus 76
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
76
sequence length
178
structure length
178
Chain Sequence
b'QWVDCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFAAAHGLCL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords PENTAPEPTIDE REPEAT FAMILY PROTEIN
publication title A Fluroquinolone Resistance Protein from Mycobacterium Tuberculosis that Mimics DNA
pubmed doi rcsb
source organism Mycobacterium tuberculosis
molecule tags Pentapeptide repeat protein
total genus 76
structure length 178
sequence length 178
ec nomenclature
pdb deposition date 2005-03-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13599 Pentapeptide_4 Pentapeptide repeats (9 copies)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.100 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 2bm6A00
5JMCB 2W7ZA 3N90A 2BM4A 2BM7A 4JRAC 2G0YA 2J8IA 2BM5A 5JLVC 2F3LA 2BM6A
chains in the Genus database with same CATH superfamily
4YEJA 4XONA 4XNFA 2V5IA 3B90A 2NZMA 2J8KA 4U4BA 1DBOA 2NSPA 1PE9A 3TH0A 4OZZA 3WWGA 1QA1A 3LYCA 1QJVA 3PETA 1O8KA 1TYWA 4C2LA 2O6WA 1BN8A 3SUCA 1OFMA 1O8IA 4XLCA 3B4NA 2EWEA 1EZGA 2VFMA 2QX3A 3UW0A 2XTXA 3PSSA 1PXZA 2O04A 4XOPA 2BSPA 3BH6B 3GQ9A 3VSUA 1O8MA 1TYUA 4XORA 1LLWA 3SY2A 4NK6A 2O1DA 3NAWA 4YZAA 4JRAC 1HF2A 1PLUA 3VMVA 1KCCA 4Z03A 4OZYA 1TYVA 2X85A 5JMCB 4URRA 1OGMX 1DBGA 4AVZA 2QYUA 3RIQA 2XTYA 1QA3A 1OFDA 3JX8A 4YCQA 1IA5A 2QY1A 3T9GA 2NTPA 4W8SA 2XTWA 4XQFA 4XMYA 4YFOA 1WXRA 1QRCA 2X6XA 4XLFA 1VBLA 1KQ5A 1HG8A 1DABA 1EA0A 1JRGA 3GQAA 3LMWA 1IDJA 4XKVA 4XLHA 3VMWA 1K8FA 2NTBA 1TSPA 3KRGA 4W8QA 4YZ0A 1K4ZA 1KCDA 3AK5A 3SYJA 1H80A 1LM1A 2NT9A 5AMVA 3N90A 3GQ7A 4Z06A 3GQ8A 2NT6A 5C1CA 3FY3A 1WMRA 2INVA 2NTQA 4XKWA 1BHEA 3ML3A 2O17A 1LLZA 2UVEA 2VFNA 1OFLA 2VJIA 2BM4A 1O88A 1QRBA 1GQ8A 2G0YA 2IOUG 3B8YA 1QCXA 1TYXA 2VBMA 2O0VA 4KH3A 4Z05A 3BH7B 2ODLA 2NSTA 2XT4A 1JTAA 3GRHA 4OM9A 3EQNA 2Z8GA 4W8RA 2J8IA 2VBKA 4XLAA 3SQVA 2BX6A 1O8FA 3P4GA 2VJJA 2W7ZA 4XM3A 3PSZA 4XN0A 3JURA 1RMGA 2VFOA 2X6YA 2PECA 1O8LA 1OGOX 4YZXA 4EW9A 2QXZA 2QZAA 1O8JA 4YEIA 3NB2A 2B0RA 4MXNA 1AIRA 1IDKA 2X3HA 2X6WA 3LJYA 5JLVC 4OJ5A 2BM6A 4YDTA 1O8HA 4YELA 3VSTA 2XT2A 2PYGA 2UVFA 4V02C 5DNSA 3VSVA 3ZSCA 1EE6A 1K5CA 1KTWA 4XOTA 1RU4A 4OJ6A 1CLWA 4XN3A 4MR0A 3ZPPA 2PYHA 3EQOA 1OOCA 2VFQA 3H09A 1OFEA 4NK8A 1IB4A 4XL9A 2BM5A 3DU1X 2YUHA 4YZQA 1O8EA 2VFPA 2O0WA 1NHCA 1O8DA 4W8TA 4OJPA 1L1IA 4OJLA 1QA2A 1CZFA 4XR6A 3SZEA 1QQ1A 3N6ZA 4OJOA 4PMHA 4XLEA 4I84A 2VBEA 1O8GA 2XC1A 5C1EA 4HWVA 1X0CA 4OPWA 1XG2A 2BM7A 4U49A 2IQ7A 1RWRA 2F3LA 2INUA 4YC5A
chains in the Genus database with same CATH topology
1TYVA 5JMCB 1DABA 2VFNA 4V02C 2V5IA 2BM4A 1QRBA 3RIQA 2G0YA 1QA3A 2IOUG 3JX8A 1TYXA 4OJ6A 1CLWA 3TH0A 4KH3A 1QA1A 3LYCA 2VFQA 3BH7B 1QRCA 1WXRA 3H09A 3PETA 4OM9A 1TYWA 2J8IA 2BM5A 2BX6A 1KQ5A 2YUHA 3ML3A 3P4GA 2VFPA 2VFMA 2W7ZA 4OJPA 1K8FA 4OJLA 1TSPA 1QA2A 2VFOA 3SZEA 1QQ1A 3N6ZA 4OJOA 3AK5A 1K4ZA 3BH6B 3SYJA 1TYUA 2XC1A 2B0RA 3N90A 4OPWA 2BM7A 4JRAC 3LJYA 5JLVC 1HF2A 4OJ5A 2F3LA 2BM6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5JMC B;  2W7Z A;  3N90 A;  2BM4 A;  2BM7 A;  4JRA C;  2G0Y A;  2J8I A;  2BM5 A;  5JLV C;  2F3L A;  2BM6 A; 
#chains in the Genus database with same CATH topology
 4YEJ A;  4XON A;  4XNF A;  2V5I A;  3B90 A;  2NZM A;  2J8K A;  4U4B A;  1DBO A;  2NSP A;  1PE9 A;  3TH0 A;  4OZZ A;  3WWG A;  1QA1 A;  3LYC A;  1QJV A;  3PET A;  1O8K A;  1TYW A;  4C2L A;  2O6W A;  1BN8 A;  3SUC A;  1OFM A;  1O8I A;  4XLC A;  3B4N A;  2EWE A;  1EZG A;  2VFM A;  2QX3 A;  3UW0 A;  2XTX A;  3PSS A;  1PXZ A;  2O04 A;  4XOP A;  2BSP A;  3BH6 B;  3GQ9 A;  3VSU A;  1O8M A;  1TYU A;  4XOR A;  1LLW A;  3SY2 A;  4NK6 A;  2O1D A;  3NAW A;  4YZA A;  4JRA C;  1HF2 A;  1PLU A;  3VMV A;  1KCC A;  4Z03 A;  4OZY A;  1TYV A;  2X85 A;  5JMC B;  4URR A;  1OGM X;  1DBG A;  4AVZ A;  2QYU A;  3RIQ A;  2XTY A;  1QA3 A;  1OFD A;  3JX8 A;  4YCQ A;  1IA5 A;  2QY1 A;  3T9G A;  2NTP A;  4W8S A;  2XTW A;  4XQF A;  4XMY A;  4YFO A;  1WXR A;  1QRC A;  2X6X A;  4XLF A;  1VBL A;  1KQ5 A;  1HG8 A;  1DAB A;  1EA0 A;  1JRG A;  3GQA A;  3LMW A;  1IDJ A;  4XKV A;  4XLH A;  3VMW A;  1K8F A;  2NTB A;  1TSP A;  3KRG A;  4W8Q A;  4YZ0 A;  1K4Z A;  1KCD A;  3AK5 A;  3SYJ A;  1H80 A;  1LM1 A;  2NT9 A;  5AMV A;  3N90 A;  3GQ7 A;  4Z06 A;  3GQ8 A;  2NT6 A;  5C1C A;  3FY3 A;  1WMR A;  2INV A;  2NTQ A;  4XKW A;  1BHE A;  3ML3 A;  2O17 A;  1LLZ A;  2UVE A;  2VFN A;  1OFL A;  2VJI A;  2BM4 A;  1O88 A;  1QRB A;  1GQ8 A;  2G0Y A;  2IOU G;  3B8Y A;  1QCX A;  1TYX A;  2VBM A;  2O0V A;  4KH3 A;  4Z05 A;  3BH7 B;  2ODL A;  2NST A;  2XT4 A;  1JTA A;  3GRH A;  4OM9 A;  3EQN A;  2Z8G A;  4W8R A;  2J8I A;  2VBK A;  4XLA A;  3SQV A;  2BX6 A;  1O8F A;  3P4G A;  2VJJ A;  2W7Z A;  4XM3 A;  3PSZ A;  4XN0 A;  3JUR A;  1RMG A;  2VFO A;  2X6Y A;  2PEC A;  1O8L A;  1OGO X;  4YZX A;  4EW9 A;  2QXZ A;  2QZA A;  1O8J A;  4YEI A;  3NB2 A;  2B0R A;  4MXN A;  1AIR A;  1IDK A;  2X3H A;  2X6W A;  3LJY A;  5JLV C;  4OJ5 A;  2BM6 A;  4YDT A;  1O8H A;  4YEL A;  3VST A;  2XT2 A;  2PYG A;  2UVF A;  4V02 C;  5DNS A;  3VSV A;  3ZSC A;  1EE6 A;  1K5C A;  1KTW A;  4XOT A;  1RU4 A;  4OJ6 A;  1CLW A;  4XN3 A;  4MR0 A;  3ZPP A;  2PYH A;  3EQO A;  1OOC A;  2VFQ A;  3H09 A;  1OFE A;  4NK8 A;  1IB4 A;  4XL9 A;  2BM5 A;  3DU1 X;  2YUH A;  4YZQ A;  1O8E A;  2VFP A;  2O0W A;  1NHC A;  1O8D A;  4W8T A;  4OJP A;  1L1I A;  4OJL A;  1QA2 A;  1CZF A;  4XR6 A;  3SZE A;  1QQ1 A;  3N6Z A;  4OJO A;  4PMH A;  4XLE A;  4I84 A;  2VBE A;  1O8G A;  2XC1 A;  5C1E A;  4HWV A;  1X0C A;  4OPW A;  1XG2 A;  2BM7 A;  4U49 A;  2IQ7 A;  1RWR A;  2F3L A;  2INU A;  4YC5 A; 
#chains in the Genus database with same CATH homology
 1TYV A;  5JMC B;  1DAB A;  2VFN A;  4V02 C;  2V5I A;  2BM4 A;  1QRB A;  3RIQ A;  2G0Y A;  1QA3 A;  2IOU G;  3JX8 A;  1TYX A;  4OJ6 A;  1CLW A;  3TH0 A;  4KH3 A;  1QA1 A;  3LYC A;  2VFQ A;  3BH7 B;  1QRC A;  1WXR A;  3H09 A;  3PET A;  4OM9 A;  1TYW A;  2J8I A;  2BM5 A;  2BX6 A;  1KQ5 A;  2YUH A;  3ML3 A;  3P4G A;  2VFP A;  2VFM A;  2W7Z A;  4OJP A;  1K8F A;  4OJL A;  1TSP A;  1QA2 A;  2VFO A;  3SZE A;  1QQ1 A;  3N6Z A;  4OJO A;  3AK5 A;  1K4Z A;  3BH6 B;  3SYJ A;  1TYU A;  2XC1 A;  2B0R A;  3N90 A;  4OPW A;  2BM7 A;  4JRA C;  3LJY A;  5JLV C;  1HF2 A;  4OJ5 A;  2F3L A;  2BM6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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