2BOVB

Molecular recognition of an adp-ribosylating clostridium botulinum c3 exoenzyme by rala gtpase
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
208
structure length
208
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords RAS-RELATED PROTEIN RAL-A
publication title Molecular Recognition of an Adp-Ribosylating Clostridium Botulinum C3 Exoenzyme by Rala Gtpase
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transferase
total genus 69
structure length 208
sequence length 208
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-04-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2bovB00
2WN4A 5D1UA 1JKYA 4H0YA 4TR5A 5DZQA 1J7NA 1QS2A 4XM8A 5BWMB 2J3XA 1G24A 4XSGB 2C8BX 4WF6A 3NTSA 1GIQA 4FMLA 4XM6A 4XSHB 1GXYA 1R4BA 1OJQA 4PKUA 5H04A 3BUZA 4H0XA 1GIRA 2C8DA 2J3VA 2A78B 4PKTA 2GWMA 5H03A 2GWLA 1QS1A 2WN8A 4FXQA 1GXZA 4PKRA 1PWPA 1OJZA 2C8CA 4ELNA 2A9KB 4DV8A 1OG4A 4GF1A 4PKQA 1OG1A 2C8AA 5GTTA 2C8EE 5D1SA 1OG3A 2WN6A 4H0VA 4XM7A 4PKWA 4PKVA 2WN7A 1PWQA 2C8HA 4PKSA 2C8FE 2J3ZA 2C8GA 2WN5A 1GZEA 1PWWA 2C89A 1PWUA 1ZXVA 1R45A 4FK7A 5D1TA 3U0JA 4H03A 1PWVA 1YQYA 1GZFA 2BOVB 3BW8A 1UZIA 1GY0A 4GY2A 4H0TA
chains in the Genus database with same CATH superfamily
2WN4A 5D1UA 1JKYA 4H0YA 4TR5A 5DZQA 1J7NA 1QS2A 4XM8A 5BWMB 2J3XA 1G24A 4XSGB 2C8BX 4WF6A 3NTSA 1GIQA 4FMLA 4XM6A 4XSHB 1GXYA 1R4BA 1OJQA 4PKUA 5H04A 3BUZA 4H0XA 1GIRA 2C8DA 2J3VA 2A78B 4PKTA 2GWMA 5H03A 2GWLA 1QS1A 2WN8A 4FXQA 1GXZA 4PKRA 1PWPA 1OJZA 2C8CA 4ELNA 2A9KB 4DV8A 1OG4A 4GF1A 4PKQA 1OG1A 2C8AA 5GTTA 2C8EE 5D1SA 1OG3A 2WN6A 4H0VA 4XM7A 4PKWA 4PKVA 2WN7A 1PWQA 2C8HA 4PKSA 2C8FE 2J3ZA 2C8GA 2WN5A 1GZEA 1PWWA 2C89A 1PWUA 1ZXVA 1R45A 4FK7A 5D1TA 3U0JA 4H03A 1PWVA 1YQYA 1GZFA 2BOVB 3BW8A 1UZIA 1GY0A 4GY2A 4H0TA
chains in the Genus database with same CATH topology
2WN4A 5D1UA 1JKYA 4H0YA 4TR5A 5DZQA 1J7NA 1QS2A 4XM8A 5BWMB 2J3XA 1G24A 4XSGB 2C8BX 4WF6A 3NTSA 1GIQA 4FMLA 4XM6A 4XSHB 1GXYA 1R4BA 1OJQA 4PKUA 5H04A 3BUZA 4H0XA 1GIRA 2C8DA 2J3VA 2A78B 4PKTA 2GWMA 5H03A 2GWLA 1QS1A 2WN8A 4FXQA 1GXZA 4PKRA 1PWPA 1OJZA 2C8CA 4ELNA 2A9KB 4DV8A 1OG4A 4GF1A 4PKQA 1OG1A 2C8AA 5GTTA 2C8EE 5D1SA 1OG3A 2WN6A 4H0VA 4XM7A 4PKWA 4PKVA 2WN7A 1PWQA 2C8HA 4PKSA 2C8FE 2J3ZA 2C8GA 2WN5A 1GZEA 1PWWA 2C89A 1PWUA 1ZXVA 1R45A 4FK7A 5D1TA 3U0JA 4H03A 1PWVA 1YQYA 1GZFA 2BOVB 3BW8A 1UZIA 1GY0A 4GY2A 4H0TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WN4 A;  5D1U A;  1JKY A;  4H0Y A;  4TR5 A;  5DZQ A;  1J7N A;  1QS2 A;  4XM8 A;  5BWM B;  2J3X A;  1G24 A;  4XSG B;  2C8B X;  4WF6 A;  3NTS A;  1GIQ A;  4FML A;  4XM6 A;  4XSH B;  1GXY A;  1R4B A;  1OJQ A;  4PKU A;  5H04 A;  3BUZ A;  4H0X A;  1GIR A;  2C8D A;  2J3V A;  2A78 B;  4PKT A;  2GWM A;  5H03 A;  2GWL A;  1QS1 A;  2WN8 A;  4FXQ A;  1GXZ A;  4PKR A;  1PWP A;  1OJZ A;  2C8C A;  4ELN A;  2A9K B;  4DV8 A;  1OG4 A;  4GF1 A;  4PKQ A;  1OG1 A;  2C8A A;  5GTT A;  2C8E E;  5D1S A;  1OG3 A;  2WN6 A;  4H0V A;  4XM7 A;  4PKW A;  4PKV A;  2WN7 A;  1PWQ A;  2C8H A;  4PKS A;  2C8F E;  2J3Z A;  2C8G A;  2WN5 A;  1GZE A;  1PWW A;  2C89 A;  1PWU A;  1ZXV A;  1R45 A;  4FK7 A;  5D1T A;  3U0J A;  4H03 A;  1PWV A;  1YQY A;  1GZF A;  2BOV B;  3BW8 A;  1UZI A;  1GY0 A;  4GY2 A;  4H0T A; 
#chains in the Genus database with same CATH topology
 2WN4 A;  5D1U A;  1JKY A;  4H0Y A;  4TR5 A;  5DZQ A;  1J7N A;  1QS2 A;  4XM8 A;  5BWM B;  2J3X A;  1G24 A;  4XSG B;  2C8B X;  4WF6 A;  3NTS A;  1GIQ A;  4FML A;  4XM6 A;  4XSH B;  1GXY A;  1R4B A;  1OJQ A;  4PKU A;  5H04 A;  3BUZ A;  4H0X A;  1GIR A;  2C8D A;  2J3V A;  2A78 B;  4PKT A;  2GWM A;  5H03 A;  2GWL A;  1QS1 A;  2WN8 A;  4FXQ A;  1GXZ A;  4PKR A;  1PWP A;  1OJZ A;  2C8C A;  4ELN A;  2A9K B;  4DV8 A;  1OG4 A;  4GF1 A;  4PKQ A;  1OG1 A;  2C8A A;  5GTT A;  2C8E E;  5D1S A;  1OG3 A;  2WN6 A;  4H0V A;  4XM7 A;  4PKW A;  4PKV A;  2WN7 A;  1PWQ A;  2C8H A;  4PKS A;  2C8F E;  2J3Z A;  2C8G A;  2WN5 A;  1GZE A;  1PWW A;  2C89 A;  1PWU A;  1ZXV A;  1R45 A;  4FK7 A;  5D1T A;  3U0J A;  4H03 A;  1PWV A;  1YQY A;  1GZF A;  2BOV B;  3BW8 A;  1UZI A;  1GY0 A;  4GY2 A;  4H0T A; 
#chains in the Genus database with same CATH homology
 2WN4 A;  5D1U A;  1JKY A;  4H0Y A;  4TR5 A;  5DZQ A;  1J7N A;  1QS2 A;  4XM8 A;  5BWM B;  2J3X A;  1G24 A;  4XSG B;  2C8B X;  4WF6 A;  3NTS A;  1GIQ A;  4FML A;  4XM6 A;  4XSH B;  1GXY A;  1R4B A;  1OJQ A;  4PKU A;  5H04 A;  3BUZ A;  4H0X A;  1GIR A;  2C8D A;  2J3V A;  2A78 B;  4PKT A;  2GWM A;  5H03 A;  2GWL A;  1QS1 A;  2WN8 A;  4FXQ A;  1GXZ A;  4PKR A;  1PWP A;  1OJZ A;  2C8C A;  4ELN A;  2A9K B;  4DV8 A;  1OG4 A;  4GF1 A;  4PKQ A;  1OG1 A;  2C8A A;  5GTT A;  2C8E E;  5D1S A;  1OG3 A;  2WN6 A;  4H0V A;  4XM7 A;  4PKW A;  4PKV A;  2WN7 A;  1PWQ A;  2C8H A;  4PKS A;  2C8F E;  2J3Z A;  2C8G A;  2WN5 A;  1GZE A;  1PWW A;  2C89 A;  1PWU A;  1ZXV A;  1R45 A;  4FK7 A;  5D1T A;  3U0J A;  4H03 A;  1PWV A;  1YQY A;  1GZF A;  2BOV B;  3BW8 A;  1UZI A;  1GY0 A;  4GY2 A;  4H0T A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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