2BOVB

Molecular recognition of an adp-ribosylating clostridium botulinum c3 exoenzyme by rala gtpase
Total Genus 69
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
208
structure length
208
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Molecular Recognition of an Adp-Ribosylating Clostridium Botulinum C3 Exoenzyme by Rala Gtpase
pubmed doi rcsb
molecule keywords RAS-RELATED PROTEIN RAL-A
source organism Homo sapiens
molecule tags Transferase
total genus 69
structure length 208
sequence length 208
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-04-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2bovB00
5H04A 1ZXVA 4PKRA 2C8DA 1PWQA 1QS1A 2BOVB 4WF6A 1OG4A 4XSGB 4DV8A 4H0TA 3BW8A 2C8FE 3U0JA 1GY0A 4FK7A 1PWVA 4PKSA 1PWPA 2J3ZA 4GF1A 4XM6A 1UZIA 4GY2A 5DZQA 3BUZA 2WN6A 4TR5A 5D1UA 4PKQA 4H0XA 1QS2A 4PKUA 2WN8A 1GZFA 4H03A 4H0VA 1OG1A 1OJQA 1G24A 2WN5A 2C8BX 4PKVA 2J3VA 2C8GA 4XM7A 1GXYA 1GXZA 4ELNA 1GIRA 2C8CA 1JKYA 4XSHB 2C8HA 1R4BA 1OG3A 2C8AA 5H03A 3NTSA 2WN7A 5D1TA 1PWUA 1YQYA 4FXQA 2GWLA 2A9KB 1PWWA 2WN4A 5GTTA 5BWMB 1GIQA 4PKTA 2GWMA 1OJZA 1GZEA 5D1SA 1R45A 2C8EE 4FMLA 4XM8A 2A78B 2C89A 1J7NA 2J3XA 4PKWA 4H0YA
chains in the Genus database with same CATH superfamily
5H04A 1ZXVA 4PKRA 2C8DA 1PWQA 1QS1A 2BOVB 4WF6A 1OG4A 4XSGB 4DV8A 4H0TA 3BW8A 2C8FE 3U0JA 1GY0A 4FK7A 1PWVA 4PKSA 1PWPA 2J3ZA 4GF1A 4XM6A 1UZIA 4GY2A 5DZQA 3BUZA 2WN6A 4TR5A 5D1UA 4PKQA 4H0XA 1QS2A 4PKUA 2WN8A 1GZFA 4H03A 4H0VA 1OG1A 1OJQA 1G24A 2WN5A 2C8BX 4PKVA 2J3VA 2C8GA 4XM7A 1GXYA 1GXZA 4ELNA 1GIRA 2C8CA 1JKYA 4XSHB 2C8HA 1R4BA 1OG3A 2C8AA 5H03A 3NTSA 2WN7A 5D1TA 1PWUA 1YQYA 4FXQA 2GWLA 2A9KB 1PWWA 2WN4A 5GTTA 5BWMB 1GIQA 4PKTA 2GWMA 1OJZA 1GZEA 5D1SA 1R45A 2C8EE 4FMLA 4XM8A 2A78B 2C89A 1J7NA 2J3XA 4PKWA 4H0YA
chains in the Genus database with same CATH topology
5H04A 1ZXVA 4PKRA 2C8DA 1PWQA 1QS1A 2BOVB 4WF6A 1OG4A 4XSGB 4DV8A 4H0TA 3BW8A 2C8FE 3U0JA 1GY0A 4FK7A 1PWVA 4PKSA 1PWPA 2J3ZA 4GF1A 4XM6A 1UZIA 4GY2A 5DZQA 3BUZA 2WN6A 4TR5A 5D1UA 4PKQA 4H0XA 1QS2A 4PKUA 2WN8A 1GZFA 4H03A 4H0VA 1OG1A 1OJQA 1G24A 2WN5A 2C8BX 4PKVA 2J3VA 2C8GA 4XM7A 1GXYA 1GXZA 4ELNA 1GIRA 2C8CA 1JKYA 4XSHB 2C8HA 1R4BA 1OG3A 2C8AA 5H03A 3NTSA 2WN7A 5D1TA 1PWUA 1YQYA 4FXQA 2GWLA 2A9KB 1PWWA 2WN4A 5GTTA 5BWMB 1GIQA 4PKTA 2GWMA 1OJZA 1GZEA 5D1SA 1R45A 2C8EE 4FMLA 4XM8A 2A78B 2C89A 1J7NA 2J3XA 4PKWA 4H0YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5H04 A;  1ZXV A;  4PKR A;  2C8D A;  1PWQ A;  1QS1 A;  2BOV B;  4WF6 A;  1OG4 A;  4XSG B;  4DV8 A;  4H0T A;  3BW8 A;  2C8F E;  3U0J A;  1GY0 A;  4FK7 A;  1PWV A;  4PKS A;  1PWP A;  2J3Z A;  4GF1 A;  4XM6 A;  1UZI A;  4GY2 A;  5DZQ A;  3BUZ A;  2WN6 A;  4TR5 A;  5D1U A;  4PKQ A;  4H0X A;  1QS2 A;  4PKU A;  2WN8 A;  1GZF A;  4H03 A;  4H0V A;  1OG1 A;  1OJQ A;  1G24 A;  2WN5 A;  2C8B X;  4PKV A;  2J3V A;  2C8G A;  4XM7 A;  1GXY A;  1GXZ A;  4ELN A;  1GIR A;  2C8C A;  1JKY A;  4XSH B;  2C8H A;  1R4B A;  1OG3 A;  2C8A A;  5H03 A;  3NTS A;  2WN7 A;  5D1T A;  1PWU A;  1YQY A;  4FXQ A;  2GWL A;  2A9K B;  1PWW A;  2WN4 A;  5GTT A;  5BWM B;  1GIQ A;  4PKT A;  2GWM A;  1OJZ A;  1GZE A;  5D1S A;  1R45 A;  2C8E E;  4FML A;  4XM8 A;  2A78 B;  2C89 A;  1J7N A;  2J3X A;  4PKW A;  4H0Y A; 
#chains in the Genus database with same CATH topology
 5H04 A;  1ZXV A;  4PKR A;  2C8D A;  1PWQ A;  1QS1 A;  2BOV B;  4WF6 A;  1OG4 A;  4XSG B;  4DV8 A;  4H0T A;  3BW8 A;  2C8F E;  3U0J A;  1GY0 A;  4FK7 A;  1PWV A;  4PKS A;  1PWP A;  2J3Z A;  4GF1 A;  4XM6 A;  1UZI A;  4GY2 A;  5DZQ A;  3BUZ A;  2WN6 A;  4TR5 A;  5D1U A;  4PKQ A;  4H0X A;  1QS2 A;  4PKU A;  2WN8 A;  1GZF A;  4H03 A;  4H0V A;  1OG1 A;  1OJQ A;  1G24 A;  2WN5 A;  2C8B X;  4PKV A;  2J3V A;  2C8G A;  4XM7 A;  1GXY A;  1GXZ A;  4ELN A;  1GIR A;  2C8C A;  1JKY A;  4XSH B;  2C8H A;  1R4B A;  1OG3 A;  2C8A A;  5H03 A;  3NTS A;  2WN7 A;  5D1T A;  1PWU A;  1YQY A;  4FXQ A;  2GWL A;  2A9K B;  1PWW A;  2WN4 A;  5GTT A;  5BWM B;  1GIQ A;  4PKT A;  2GWM A;  1OJZ A;  1GZE A;  5D1S A;  1R45 A;  2C8E E;  4FML A;  4XM8 A;  2A78 B;  2C89 A;  1J7N A;  2J3X A;  4PKW A;  4H0Y A; 
#chains in the Genus database with same CATH homology
 5H04 A;  1ZXV A;  4PKR A;  2C8D A;  1PWQ A;  1QS1 A;  2BOV B;  4WF6 A;  1OG4 A;  4XSG B;  4DV8 A;  4H0T A;  3BW8 A;  2C8F E;  3U0J A;  1GY0 A;  4FK7 A;  1PWV A;  4PKS A;  1PWP A;  2J3Z A;  4GF1 A;  4XM6 A;  1UZI A;  4GY2 A;  5DZQ A;  3BUZ A;  2WN6 A;  4TR5 A;  5D1U A;  4PKQ A;  4H0X A;  1QS2 A;  4PKU A;  2WN8 A;  1GZF A;  4H03 A;  4H0V A;  1OG1 A;  1OJQ A;  1G24 A;  2WN5 A;  2C8B X;  4PKV A;  2J3V A;  2C8G A;  4XM7 A;  1GXY A;  1GXZ A;  4ELN A;  1GIR A;  2C8C A;  1JKY A;  4XSH B;  2C8H A;  1R4B A;  1OG3 A;  2C8A A;  5H03 A;  3NTS A;  2WN7 A;  5D1T A;  1PWU A;  1YQY A;  4FXQ A;  2GWL A;  2A9K B;  1PWW A;  2WN4 A;  5GTT A;  5BWM B;  1GIQ A;  4PKT A;  2GWM A;  1OJZ A;  1GZE A;  5D1S A;  1R45 A;  2C8E E;  4FML A;  4XM8 A;  2A78 B;  2C89 A;  1J7N A;  2J3X A;  4PKW A;  4H0Y A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...