2BOVB

Molecular recognition of an adp-ribosylating clostridium botulinum c3 exoenzyme by rala gtpase
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
208
structure length
208
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Homo sapiens
publication title Molecular Recognition of an Adp-Ribosylating Clostridium Botulinum C3 Exoenzyme by Rala Gtpase
pubmed doi rcsb
molecule keywords RAS-RELATED PROTEIN RAL-A
total genus 69
structure length 208
sequence length 208
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-04-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2bovB00
1PWVA 4H0VA 4PKRA 2J3XA 1R45A 1OG3A 1GIQA 2WN4A 4XSGB 2C8FE 4PKUA 2J3ZA 1YQYA 1G24A 4GY2A 2GWMA 5BWMB 1QS2A 4PKVA 2GWLA 1GIRA 2WN7A 3BUZA 5D1UA 5H03A 4H0YA 2C8CA 5D1TA 4ELNA 1PWPA 4WF6A 1PWQA 5D1SA 1OG1A 1PWUA 1GZEA 2C8EE 4FXQA 4DV8A 4H0XA 4PKSA 5GTTA 2A9KB 1PWWA 2C8DA 2C8BX 3BW8A 2WN6A 4XM6A 2A78B 1QS1A 2C89A 4H03A 4GF1A 2C8HA 4XSHB 1OJZA 1GXYA 5DZQA 1OG4A 2C8AA 1GY0A 1JKYA 5H04A 1J7NA 1GXZA 4PKWA 4FK7A 1ZXVA 3NTSA 3U0JA 4XM8A 4XM7A 4H0TA 4PKQA 2BOVB 4PKTA 4TR5A 1GZFA 2WN5A 2J3VA 4FMLA 1UZIA 2WN8A 1OJQA 2C8GA 1R4BA
chains in the Genus database with same CATH superfamily
1PWVA 4H0VA 4PKRA 2J3XA 1R45A 1OG3A 1GIQA 2WN4A 4XSGB 2C8FE 4PKUA 2J3ZA 1YQYA 1G24A 4GY2A 2GWMA 5BWMB 1QS2A 4PKVA 2GWLA 1GIRA 2WN7A 3BUZA 5D1UA 5H03A 4H0YA 2C8CA 5D1TA 4ELNA 1PWPA 4WF6A 1PWQA 5D1SA 1OG1A 1PWUA 1GZEA 2C8EE 4FXQA 4DV8A 4H0XA 4PKSA 5GTTA 2A9KB 1PWWA 2C8DA 2C8BX 3BW8A 2WN6A 4XM6A 2A78B 1QS1A 2C89A 4H03A 4GF1A 2C8HA 4XSHB 1OJZA 1GXYA 5DZQA 1OG4A 2C8AA 1GY0A 1JKYA 5H04A 1J7NA 1GXZA 4PKWA 4FK7A 1ZXVA 3NTSA 3U0JA 4XM8A 4XM7A 4H0TA 4PKQA 2BOVB 4PKTA 4TR5A 1GZFA 2WN5A 2J3VA 4FMLA 1UZIA 2WN8A 1OJQA 2C8GA 1R4BA
chains in the Genus database with same CATH topology
1PWVA 4H0VA 4PKRA 2J3XA 1R45A 1OG3A 1GIQA 2WN4A 4XSGB 2C8FE 4PKUA 2J3ZA 1YQYA 1G24A 4GY2A 2GWMA 5BWMB 1QS2A 4PKVA 2GWLA 1GIRA 2WN7A 3BUZA 5D1UA 5H03A 4H0YA 2C8CA 5D1TA 4ELNA 1PWPA 4WF6A 1PWQA 5D1SA 1OG1A 1PWUA 1GZEA 2C8EE 4FXQA 4DV8A 4H0XA 4PKSA 5GTTA 2A9KB 1PWWA 2C8DA 2C8BX 3BW8A 2WN6A 4XM6A 2A78B 1QS1A 2C89A 4H03A 4GF1A 2C8HA 4XSHB 1OJZA 1GXYA 5DZQA 1OG4A 2C8AA 1GY0A 1JKYA 5H04A 1J7NA 1GXZA 4PKWA 4FK7A 1ZXVA 3NTSA 3U0JA 4XM8A 4XM7A 4H0TA 4PKQA 2BOVB 4PKTA 4TR5A 1GZFA 2WN5A 2J3VA 4FMLA 1UZIA 2WN8A 1OJQA 2C8GA 1R4BA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1PWV A;  4H0V A;  4PKR A;  2J3X A;  1R45 A;  1OG3 A;  1GIQ A;  2WN4 A;  4XSG B;  2C8F E;  4PKU A;  2J3Z A;  1YQY A;  1G24 A;  4GY2 A;  2GWM A;  5BWM B;  1QS2 A;  4PKV A;  2GWL A;  1GIR A;  2WN7 A;  3BUZ A;  5D1U A;  5H03 A;  4H0Y A;  2C8C A;  5D1T A;  4ELN A;  1PWP A;  4WF6 A;  1PWQ A;  5D1S A;  1OG1 A;  1PWU A;  1GZE A;  2C8E E;  4FXQ A;  4DV8 A;  4H0X A;  4PKS A;  5GTT A;  2A9K B;  1PWW A;  2C8D A;  2C8B X;  3BW8 A;  2WN6 A;  4XM6 A;  2A78 B;  1QS1 A;  2C89 A;  4H03 A;  4GF1 A;  2C8H A;  4XSH B;  1OJZ A;  1GXY A;  5DZQ A;  1OG4 A;  2C8A A;  1GY0 A;  1JKY A;  5H04 A;  1J7N A;  1GXZ A;  4PKW A;  4FK7 A;  1ZXV A;  3NTS A;  3U0J A;  4XM8 A;  4XM7 A;  4H0T A;  4PKQ A;  2BOV B;  4PKT A;  4TR5 A;  1GZF A;  2WN5 A;  2J3V A;  4FML A;  1UZI A;  2WN8 A;  1OJQ A;  2C8G A;  1R4B A; 
#chains in the Genus database with same CATH topology
 1PWV A;  4H0V A;  4PKR A;  2J3X A;  1R45 A;  1OG3 A;  1GIQ A;  2WN4 A;  4XSG B;  2C8F E;  4PKU A;  2J3Z A;  1YQY A;  1G24 A;  4GY2 A;  2GWM A;  5BWM B;  1QS2 A;  4PKV A;  2GWL A;  1GIR A;  2WN7 A;  3BUZ A;  5D1U A;  5H03 A;  4H0Y A;  2C8C A;  5D1T A;  4ELN A;  1PWP A;  4WF6 A;  1PWQ A;  5D1S A;  1OG1 A;  1PWU A;  1GZE A;  2C8E E;  4FXQ A;  4DV8 A;  4H0X A;  4PKS A;  5GTT A;  2A9K B;  1PWW A;  2C8D A;  2C8B X;  3BW8 A;  2WN6 A;  4XM6 A;  2A78 B;  1QS1 A;  2C89 A;  4H03 A;  4GF1 A;  2C8H A;  4XSH B;  1OJZ A;  1GXY A;  5DZQ A;  1OG4 A;  2C8A A;  1GY0 A;  1JKY A;  5H04 A;  1J7N A;  1GXZ A;  4PKW A;  4FK7 A;  1ZXV A;  3NTS A;  3U0J A;  4XM8 A;  4XM7 A;  4H0T A;  4PKQ A;  2BOV B;  4PKT A;  4TR5 A;  1GZF A;  2WN5 A;  2J3V A;  4FML A;  1UZI A;  2WN8 A;  1OJQ A;  2C8G A;  1R4B A; 
#chains in the Genus database with same CATH homology
 1PWV A;  4H0V A;  4PKR A;  2J3X A;  1R45 A;  1OG3 A;  1GIQ A;  2WN4 A;  4XSG B;  2C8F E;  4PKU A;  2J3Z A;  1YQY A;  1G24 A;  4GY2 A;  2GWM A;  5BWM B;  1QS2 A;  4PKV A;  2GWL A;  1GIR A;  2WN7 A;  3BUZ A;  5D1U A;  5H03 A;  4H0Y A;  2C8C A;  5D1T A;  4ELN A;  1PWP A;  4WF6 A;  1PWQ A;  5D1S A;  1OG1 A;  1PWU A;  1GZE A;  2C8E E;  4FXQ A;  4DV8 A;  4H0X A;  4PKS A;  5GTT A;  2A9K B;  1PWW A;  2C8D A;  2C8B X;  3BW8 A;  2WN6 A;  4XM6 A;  2A78 B;  1QS1 A;  2C89 A;  4H03 A;  4GF1 A;  2C8H A;  4XSH B;  1OJZ A;  1GXY A;  5DZQ A;  1OG4 A;  2C8A A;  1GY0 A;  1JKY A;  5H04 A;  1J7N A;  1GXZ A;  4PKW A;  4FK7 A;  1ZXV A;  3NTS A;  3U0J A;  4XM8 A;  4XM7 A;  4H0T A;  4PKQ A;  2BOV B;  4PKT A;  4TR5 A;  1GZF A;  2WN5 A;  2J3V A;  4FML A;  1UZI A;  2WN8 A;  1OJQ A;  2C8G A;  1R4B A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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