2BR7A

Crystal structure of acetylcholine-binding protein (achbp) from aplysia californica in complex with hepes
Total Genus 49
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
205
structure length
205
Chain Sequence
QANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKVDSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGVTCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Receptor protein
molecule keywords SOLUBLE ACETYLCHOLINE RECEPTOR
publication title Crystal Structure of Nicotinic Acetylcholine Receptor Homolog Achbp in Complex with an Alpha- Conotoxin Pnia Variant
pubmed doi rcsb
source organism Aplysia californica
total genus 49
structure length 205
sequence length 205
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2005-05-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 2br7A00
5LXBA 4LMJA 5HEHA 2XNVA 4ZJTA 5SYOA 4BQTA 2C9TA 3RQWA 4ZJSA 2BYNA 2BR7A 5L4EA 5AFMA 4HQPA 4UY2A 5J5GA 3ZKRA 5CFBA 2W8FA 3UQ7A 4FRRA 2WNCA 2WN9A 4TWDA 4Z90A 4D01A 3WTKA 4DBMA 3U8NA 5FJVA 2ZJVA 2YKSA 5J0ZA 2Y57A 3JAFA 3RIFA 4F8HA 3UQ4A 5IUXA 4ZK4A 2BG9B 2BYQA 3PMZA 4UM3S 4ZR6A 3C84A 2UZ6A 4ILAA 4UM3P 3WTNA 2BR8A 4HFCA 2Y58A 4ZK1A 4NZBA 2XQAA 3PEOA 4X5TA 4HFHA 4NPPA 2YN6A 2XQ6A 3TLVA 3SIOA 4TNWA 5HEOA 2WNJA 4QAAA 5HEJA 2X00D 4QACA 3U8MA 3WIPA 4ZRUA 3UU6A 4COFA 2YMEA 4QH1A 2XNTA 4TWFA 4IREA 3TLUA 4B5DA 2BYPA 2XQ5A 3TLWA 5AFHA 2YMDA 5TVCA 3UU8A 5AFNA 3JADA 3U8KA 3IGQA 4ILBA 3SQ9A 1UV6A 4QABA 2Y54A 3SH1A 3T4MA 2QC1B 4HFBA 3U8JA 3RQUA 2BJ0A 5LG3A 3GUAA 3RHWA 4QH4A 1I9BA 4UXUA 5BP0A 3SQ6A 3EAMA 3ZDHA 5KZUA 3C79A 4ZZCA 5AFJA 5BRXA 2ZJUA 4UM3A 5J5HA 4UM1A 2PGZA 2BG9A 3UU3A 3P50A 5BW2A 4LMLA 4XHEA 4A97A 4XK9A 2PH9A 5L4HA 2Y56A 5J5IA 2XQ9A 3WTJA 2XZ6A 3JAEA 4HFEA 2W8GA 3WTLA 4TNVA 1UX2A 2XZ5A 4AFHA 4A98A 4BFQA 4PIRA 4AFTA 2XYTA 4IL4A 5AFMB 3EHZA 2Y7YA 4LMKA 2BYSA 2VL0A 4IL9A 5HEGA 5HCMA 2WZYA 5L47A 4ZZBA 2XQ4A 3ZDGA 5AINA 5CO5A 3WTMA 4EZ1A 2XQ3A 3WTOA 2XNUA 5AFKA 4ILCA 2XQ7A 5HEUA 2X00A 3EI0A 3TLSA 2YOEA 3P4WA 4WV9A 3TLTA 4TWHA 3U8LA 3UUBA 5JMEA 3RI5A 2XQ8A 5HCJA 4HFDA 2XYSA 3WTHA 2BG9E 4QH5A 3UU5A 2WNLA 5AFLA 3WTIA 5J5FA 3UU4A 4ALXA 5KE4A 1UW6A 2BYRA 4AFGA 4HFIA 2BG9C 4Z91A 3RIAA 3LSVA
chains in the Genus database with same CATH superfamily
5LXBA 4LMJA 5HEHA 2XNVA 4ZJTA 5SYOA 4BQTA 2C9TA 3RQWA 4ZJSA 2BYNA 2BR7A 5L4EA 5AFMA 4HQPA 4UY2A 5J5GA 3ZKRA 5CFBA 2W8FA 3UQ7A 4FRRA 2WNCA 2WN9A 4TWDA 4Z90A 4D01A 3WTKA 4DBMA 3U8NA 5FJVA 2ZJVA 2YKSA 5J0ZA 2Y57A 3JAFA 3RIFA 4F8HA 3UQ4A 5IUXA 4ZK4A 2BG9B 2BYQA 3PMZA 4UM3S 4ZR6A 3C84A 2UZ6A 4ILAA 4UM3P 3WTNA 2BR8A 4HFCA 2Y58A 4ZK1A 4NZBA 2XQAA 3PEOA 4X5TA 4HFHA 4NPPA 2YN6A 2XQ6A 3TLVA 3SIOA 4TNWA 5HEOA 2WNJA 4QAAA 5HEJA 2X00D 4QACA 3U8MA 3WIPA 4ZRUA 3UU6A 4COFA 2YMEA 4QH1A 2XNTA 4TWFA 4IREA 3TLUA 4B5DA 2BYPA 2XQ5A 3TLWA 5AFHA 2YMDA 5TVCA 3UU8A 5AFNA 3JADA 3U8KA 3IGQA 4ILBA 3SQ9A 1UV6A 4QABA 2Y54A 3SH1A 3T4MA 2QC1B 4HFBA 3U8JA 3RQUA 2BJ0A 5LG3A 3GUAA 3RHWA 4QH4A 1I9BA 4UXUA 5BP0A 3SQ6A 3EAMA 3ZDHA 5KZUA 3C79A 4ZZCA 5AFJA 5BRXA 2ZJUA 4UM3A 5J5HA 4UM1A 2PGZA 2BG9A 3UU3A 3P50A 5BW2A 4LMLA 4XHEA 4A97A 4XK9A 2PH9A 5L4HA 2Y56A 5J5IA 2XQ9A 3WTJA 2XZ6A 3JAEA 4HFEA 2W8GA 3WTLA 4TNVA 1UX2A 2XZ5A 4AFHA 4A98A 4BFQA 4PIRA 4AFTA 2XYTA 4IL4A 5AFMB 3EHZA 2Y7YA 4LMKA 2BYSA 2VL0A 4IL9A 5HEGA 5HCMA 2WZYA 5L47A 4ZZBA 2XQ4A 3ZDGA 5AINA 5CO5A 3WTMA 4EZ1A 2XQ3A 3WTOA 2XNUA 5AFKA 4ILCA 2XQ7A 5HEUA 2X00A 3EI0A 3TLSA 2YOEA 3P4WA 4WV9A 3TLTA 4TWHA 3U8LA 3UUBA 5JMEA 3RI5A 2XQ8A 5HCJA 4HFDA 2XYSA 3WTHA 2BG9E 4QH5A 3UU5A 2WNLA 5AFLA 3WTIA 5J5FA 3UU4A 4ALXA 5KE4A 1UW6A 2BYRA 4AFGA 4HFIA 2BG9C 4Z91A 3RIAA 3LSVA
chains in the Genus database with same CATH topology
5LXBA 4LMJA 5HEHA 2XNVA 4ZJTA 5SYOA 4BQTA 2C9TA 3RQWA 4ZJSA 2BYNA 2BR7A 5L4EA 5AFMA 4HQPA 4UY2A 5J5GA 3ZKRA 5CFBA 2W8FA 3UQ7A 4FRRA 2WNCA 2WN9A 4TWDA 4Z90A 4D01A 3WTKA 4DBMA 3U8NA 5FJVA 2ZJVA 2YKSA 5J0ZA 2Y57A 3JAFA 3RIFA 4F8HA 3UQ4A 5IUXA 4ZK4A 2BG9B 2BYQA 3PMZA 4UM3S 4ZR6A 3C84A 2UZ6A 4ILAA 4UM3P 3WTNA 2BR8A 4HFCA 2Y58A 4ZK1A 4NZBA 2XQAA 3PEOA 4X5TA 4HFHA 4NPPA 2YN6A 2XQ6A 3TLVA 3SIOA 4TNWA 5HEOA 2WNJA 4QAAA 5HEJA 2X00D 4QACA 3U8MA 3WIPA 4ZRUA 3UU6A 4COFA 2YMEA 4QH1A 2XNTA 4TWFA 4IREA 3TLUA 4B5DA 2BYPA 2XQ5A 3TLWA 5AFHA 2YMDA 5TVCA 3UU8A 5AFNA 3JADA 3U8KA 3IGQA 4ILBA 3SQ9A 1UV6A 4QABA 2Y54A 3SH1A 3T4MA 2QC1B 4HFBA 3U8JA 3RQUA 2BJ0A 5LG3A 3GUAA 3RHWA 4QH4A 1I9BA 4UXUA 5BP0A 3SQ6A 3EAMA 3ZDHA 5KZUA 3C79A 4ZZCA 5AFJA 5BRXA 2ZJUA 4UM3A 5J5HA 4UM1A 2PGZA 2BG9A 3UU3A 3P50A 5BW2A 4LMLA 4XHEA 4A97A 4XK9A 2PH9A 5L4HA 2Y56A 5J5IA 2XQ9A 3WTJA 2XZ6A 3JAEA 4HFEA 2W8GA 3WTLA 4TNVA 1UX2A 2XZ5A 4AFHA 4A98A 4BFQA 4PIRA 4AFTA 2XYTA 4IL4A 5AFMB 3EHZA 2Y7YA 4LMKA 2BYSA 2VL0A 4IL9A 5HEGA 5HCMA 2WZYA 5L47A 4ZZBA 2XQ4A 3ZDGA 5AINA 5CO5A 3WTMA 4EZ1A 2XQ3A 3WTOA 2XNUA 5AFKA 4ILCA 2XQ7A 5HEUA 2X00A 3EI0A 3TLSA 2YOEA 3P4WA 4WV9A 3TLTA 4TWHA 3U8LA 3UUBA 5JMEA 3RI5A 2XQ8A 5HCJA 4HFDA 2XYSA 3WTHA 2BG9E 4QH5A 3UU5A 2WNLA 5AFLA 3WTIA 5J5FA 3UU4A 4ALXA 5KE4A 1UW6A 2BYRA 4AFGA 4HFIA 2BG9C 4Z91A 3RIAA 3LSVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5LXB A;  4LMJ A;  5HEH A;  2XNV A;  4ZJT A;  5SYO A;  4BQT A;  2C9T A;  3RQW A;  4ZJS A;  2BYN A;  2BR7 A;  5L4E A;  5AFM A;  4HQP A;  4UY2 A;  5J5G A;  3ZKR A;  5CFB A;  2W8F A;  3UQ7 A;  4FRR A;  2WNC A;  2WN9 A;  4TWD A;  4Z90 A;  4D01 A;  3WTK A;  4DBM A;  3U8N A;  5FJV A;  2ZJV A;  2YKS A;  5J0Z A;  2Y57 A;  3JAF A;  3RIF A;  4F8H A;  3UQ4 A;  5IUX A;  4ZK4 A;  2BG9 B;  2BYQ A;  3PMZ A;  4UM3 S;  4ZR6 A;  3C84 A;  2UZ6 A;  4ILA A;  4UM3 P;  3WTN A;  2BR8 A;  4HFC A;  2Y58 A;  4ZK1 A;  4NZB A;  2XQA A;  3PEO A;  4X5T A;  4HFH A;  4NPP A;  2YN6 A;  2XQ6 A;  3TLV A;  3SIO A;  4TNW A;  5HEO A;  2WNJ A;  4QAA A;  5HEJ A;  2X00 D;  4QAC A;  3U8M A;  3WIP A;  4ZRU A;  3UU6 A;  4COF A;  2YME A;  4QH1 A;  2XNT A;  4TWF A;  4IRE A;  3TLU A;  4B5D A;  2BYP A;  2XQ5 A;  3TLW A;  5AFH A;  2YMD A;  5TVC A;  3UU8 A;  5AFN A;  3JAD A;  3U8K A;  3IGQ A;  4ILB A;  3SQ9 A;  1UV6 A;  4QAB A;  2Y54 A;  3SH1 A;  3T4M A;  2QC1 B;  4HFB A;  3U8J A;  3RQU A;  2BJ0 A;  5LG3 A;  3GUA A;  3RHW A;  4QH4 A;  1I9B A;  4UXU A;  5BP0 A;  3SQ6 A;  3EAM A;  3ZDH A;  5KZU A;  3C79 A;  4ZZC A;  5AFJ A;  5BRX A;  2ZJU A;  4UM3 A;  5J5H A;  4UM1 A;  2PGZ A;  2BG9 A;  3UU3 A;  3P50 A;  5BW2 A;  4LML A;  4XHE A;  4A97 A;  4XK9 A;  2PH9 A;  5L4H A;  2Y56 A;  5J5I A;  2XQ9 A;  3WTJ A;  2XZ6 A;  3JAE A;  4HFE A;  2W8G A;  3WTL A;  4TNV A;  1UX2 A;  2XZ5 A;  4AFH A;  4A98 A;  4BFQ A;  4PIR A;  4AFT A;  2XYT A;  4IL4 A;  5AFM B;  3EHZ A;  2Y7Y A;  4LMK A;  2BYS A;  2VL0 A;  4IL9 A;  5HEG A;  5HCM A;  2WZY A;  5L47 A;  4ZZB A;  2XQ4 A;  3ZDG A;  5AIN A;  5CO5 A;  3WTM A;  4EZ1 A;  2XQ3 A;  3WTO A;  2XNU A;  5AFK A;  4ILC A;  2XQ7 A;  5HEU A;  2X00 A;  3EI0 A;  3TLS A;  2YOE A;  3P4W A;  4WV9 A;  3TLT A;  4TWH A;  3U8L A;  3UUB A;  5JME A;  3RI5 A;  2XQ8 A;  5HCJ A;  4HFD A;  2XYS A;  3WTH A;  2BG9 E;  4QH5 A;  3UU5 A;  2WNL A;  5AFL A;  3WTI A;  5J5F A;  3UU4 A;  4ALX A;  5KE4 A;  1UW6 A;  2BYR A;  4AFG A;  4HFI A;  2BG9 C;  4Z91 A;  3RIA A;  3LSV A; 
#chains in the Genus database with same CATH topology
 5LXB A;  4LMJ A;  5HEH A;  2XNV A;  4ZJT A;  5SYO A;  4BQT A;  2C9T A;  3RQW A;  4ZJS A;  2BYN A;  2BR7 A;  5L4E A;  5AFM A;  4HQP A;  4UY2 A;  5J5G A;  3ZKR A;  5CFB A;  2W8F A;  3UQ7 A;  4FRR A;  2WNC A;  2WN9 A;  4TWD A;  4Z90 A;  4D01 A;  3WTK A;  4DBM A;  3U8N A;  5FJV A;  2ZJV A;  2YKS A;  5J0Z A;  2Y57 A;  3JAF A;  3RIF A;  4F8H A;  3UQ4 A;  5IUX A;  4ZK4 A;  2BG9 B;  2BYQ A;  3PMZ A;  4UM3 S;  4ZR6 A;  3C84 A;  2UZ6 A;  4ILA A;  4UM3 P;  3WTN A;  2BR8 A;  4HFC A;  2Y58 A;  4ZK1 A;  4NZB A;  2XQA A;  3PEO A;  4X5T A;  4HFH A;  4NPP A;  2YN6 A;  2XQ6 A;  3TLV A;  3SIO A;  4TNW A;  5HEO A;  2WNJ A;  4QAA A;  5HEJ A;  2X00 D;  4QAC A;  3U8M A;  3WIP A;  4ZRU A;  3UU6 A;  4COF A;  2YME A;  4QH1 A;  2XNT A;  4TWF A;  4IRE A;  3TLU A;  4B5D A;  2BYP A;  2XQ5 A;  3TLW A;  5AFH A;  2YMD A;  5TVC A;  3UU8 A;  5AFN A;  3JAD A;  3U8K A;  3IGQ A;  4ILB A;  3SQ9 A;  1UV6 A;  4QAB A;  2Y54 A;  3SH1 A;  3T4M A;  2QC1 B;  4HFB A;  3U8J A;  3RQU A;  2BJ0 A;  5LG3 A;  3GUA A;  3RHW A;  4QH4 A;  1I9B A;  4UXU A;  5BP0 A;  3SQ6 A;  3EAM A;  3ZDH A;  5KZU A;  3C79 A;  4ZZC A;  5AFJ A;  5BRX A;  2ZJU A;  4UM3 A;  5J5H A;  4UM1 A;  2PGZ A;  2BG9 A;  3UU3 A;  3P50 A;  5BW2 A;  4LML A;  4XHE A;  4A97 A;  4XK9 A;  2PH9 A;  5L4H A;  2Y56 A;  5J5I A;  2XQ9 A;  3WTJ A;  2XZ6 A;  3JAE A;  4HFE A;  2W8G A;  3WTL A;  4TNV A;  1UX2 A;  2XZ5 A;  4AFH A;  4A98 A;  4BFQ A;  4PIR A;  4AFT A;  2XYT A;  4IL4 A;  5AFM B;  3EHZ A;  2Y7Y A;  4LMK A;  2BYS A;  2VL0 A;  4IL9 A;  5HEG A;  5HCM A;  2WZY A;  5L47 A;  4ZZB A;  2XQ4 A;  3ZDG A;  5AIN A;  5CO5 A;  3WTM A;  4EZ1 A;  2XQ3 A;  3WTO A;  2XNU A;  5AFK A;  4ILC A;  2XQ7 A;  5HEU A;  2X00 A;  3EI0 A;  3TLS A;  2YOE A;  3P4W A;  4WV9 A;  3TLT A;  4TWH A;  3U8L A;  3UUB A;  5JME A;  3RI5 A;  2XQ8 A;  5HCJ A;  4HFD A;  2XYS A;  3WTH A;  2BG9 E;  4QH5 A;  3UU5 A;  2WNL A;  5AFL A;  3WTI A;  5J5F A;  3UU4 A;  4ALX A;  5KE4 A;  1UW6 A;  2BYR A;  4AFG A;  4HFI A;  2BG9 C;  4Z91 A;  3RIA A;  3LSV A; 
#chains in the Genus database with same CATH homology
 5LXB A;  4LMJ A;  5HEH A;  2XNV A;  4ZJT A;  5SYO A;  4BQT A;  2C9T A;  3RQW A;  4ZJS A;  2BYN A;  2BR7 A;  5L4E A;  5AFM A;  4HQP A;  4UY2 A;  5J5G A;  3ZKR A;  5CFB A;  2W8F A;  3UQ7 A;  4FRR A;  2WNC A;  2WN9 A;  4TWD A;  4Z90 A;  4D01 A;  3WTK A;  4DBM A;  3U8N A;  5FJV A;  2ZJV A;  2YKS A;  5J0Z A;  2Y57 A;  3JAF A;  3RIF A;  4F8H A;  3UQ4 A;  5IUX A;  4ZK4 A;  2BG9 B;  2BYQ A;  3PMZ A;  4UM3 S;  4ZR6 A;  3C84 A;  2UZ6 A;  4ILA A;  4UM3 P;  3WTN A;  2BR8 A;  4HFC A;  2Y58 A;  4ZK1 A;  4NZB A;  2XQA A;  3PEO A;  4X5T A;  4HFH A;  4NPP A;  2YN6 A;  2XQ6 A;  3TLV A;  3SIO A;  4TNW A;  5HEO A;  2WNJ A;  4QAA A;  5HEJ A;  2X00 D;  4QAC A;  3U8M A;  3WIP A;  4ZRU A;  3UU6 A;  4COF A;  2YME A;  4QH1 A;  2XNT A;  4TWF A;  4IRE A;  3TLU A;  4B5D A;  2BYP A;  2XQ5 A;  3TLW A;  5AFH A;  2YMD A;  5TVC A;  3UU8 A;  5AFN A;  3JAD A;  3U8K A;  3IGQ A;  4ILB A;  3SQ9 A;  1UV6 A;  4QAB A;  2Y54 A;  3SH1 A;  3T4M A;  2QC1 B;  4HFB A;  3U8J A;  3RQU A;  2BJ0 A;  5LG3 A;  3GUA A;  3RHW A;  4QH4 A;  1I9B A;  4UXU A;  5BP0 A;  3SQ6 A;  3EAM A;  3ZDH A;  5KZU A;  3C79 A;  4ZZC A;  5AFJ A;  5BRX A;  2ZJU A;  4UM3 A;  5J5H A;  4UM1 A;  2PGZ A;  2BG9 A;  3UU3 A;  3P50 A;  5BW2 A;  4LML A;  4XHE A;  4A97 A;  4XK9 A;  2PH9 A;  5L4H A;  2Y56 A;  5J5I A;  2XQ9 A;  3WTJ A;  2XZ6 A;  3JAE A;  4HFE A;  2W8G A;  3WTL A;  4TNV A;  1UX2 A;  2XZ5 A;  4AFH A;  4A98 A;  4BFQ A;  4PIR A;  4AFT A;  2XYT A;  4IL4 A;  5AFM B;  3EHZ A;  2Y7Y A;  4LMK A;  2BYS A;  2VL0 A;  4IL9 A;  5HEG A;  5HCM A;  2WZY A;  5L47 A;  4ZZB A;  2XQ4 A;  3ZDG A;  5AIN A;  5CO5 A;  3WTM A;  4EZ1 A;  2XQ3 A;  3WTO A;  2XNU A;  5AFK A;  4ILC A;  2XQ7 A;  5HEU A;  2X00 A;  3EI0 A;  3TLS A;  2YOE A;  3P4W A;  4WV9 A;  3TLT A;  4TWH A;  3U8L A;  3UUB A;  5JME A;  3RI5 A;  2XQ8 A;  5HCJ A;  4HFD A;  2XYS A;  3WTH A;  2BG9 E;  4QH5 A;  3UU5 A;  2WNL A;  5AFL A;  3WTI A;  5J5F A;  3UU4 A;  4ALX A;  5KE4 A;  1UW6 A;  2BYR A;  4AFG A;  4HFI A;  2BG9 C;  4Z91 A;  3RIA A;  3LSV A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...