2BUFA

Arginine feed-back inhibitable acetylglutamate kinase
Total Genus 88
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
300
structure length
292
Chain Sequence
TLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKRH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
publication title Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
pubmed doi rcsb
source organism Pseudomonas aeruginosa
total genus 88
structure length 292
sequence length 300
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2bufA00
3D40A 2BRIA 3L76A 3C20A 1B7BA 2BNDA 2W21A 3QURA 2BMUA 3T7BA 3B8GA 4I49A 4JZ8A 3ZZGA 3AB4A 2HMFA 3S6GA 1YBDA 2AKOA 4A7WA 3AAWA 4F6TA 3ZZIA 4AXSA 3LL9A 2BNFA 2V4YA 1OHAA 3WWMA 2X2WA 2J5VA 3EK5A 2A1FA 3EK6A 1OHBA 4KZTA 3K52A 3QVFA 3WWNA 2AP9A 2JJXA 2J0WA 2J4KA 2R8VA 4A7XA 3AB2A 4OLCA 3KZFA 4NDRA 1GS5A 3D2PA 2J4JA 4NDRB 4NDPA 2IJ9A 4F6TB 2J4LA 2E9YA 4NDPB 3TVIA 3S6KA 3U6UA 3ZZHA 3QVHA 2WE5A 3QUOA 2VA1A 3C1MA 2R98A 4JZ7A 3NWYA 3S6HA 2BNEA 1GSJA 3LL5A 2V5HA 2BRXA 3K56A 1OH9A 2RD5A 3K4YA 3QUNA 2BTYA 2J5TA 3LKKA 2JI5A 2WXBA 2CDQA 4NDOA 3D41A 4NDOB 3L86A 4NDQA 2BUFA 3K4OA 4JZ9A 2OGXA 3D2MA 2WE4A 4NDQB 2J0XA 4Q1TA 3C1NA 1E19A 2OGXB 1Z9DA 3ZZFA 2JJ4A 4AB7A 4USJA
chains in the Genus database with same CATH superfamily
3D40A 2BRIA 3L76A 3C20A 1B7BA 2BNDA 2W21A 3QURA 2BMUA 3T7BA 3B8GA 4I49A 4JZ8A 3ZZGA 3AB4A 2HMFA 3S6GA 1YBDA 2AKOA 4A7WA 3AAWA 4F6TA 3ZZIA 4AXSA 3LL9A 2BNFA 2V4YA 1OHAA 3WWMA 2X2WA 2J5VA 3EK5A 2A1FA 3EK6A 1OHBA 4KZTA 3K52A 3QVFA 3WWNA 2AP9A 2JJXA 2J0WA 2J4KA 2R8VA 4A7XA 3AB2A 4OLCA 3KZFA 4NDRA 1GS5A 3D2PA 2J4JA 4NDRB 4NDPA 2IJ9A 4F6TB 2J4LA 2E9YA 4NDPB 3TVIA 3S6KA 3U6UA 3ZZHA 3QVHA 2WE5A 3QUOA 2VA1A 3C1MA 2R98A 4JZ7A 3NWYA 3S6HA 2BNEA 1GSJA 3LL5A 2V5HA 2BRXA 3K56A 1OH9A 2RD5A 3K4YA 3QUNA 2BTYA 2J5TA 3LKKA 2JI5A 2WXBA 2CDQA 4NDOA 3D41A 4NDOB 3L86A 4NDQA 2BUFA 3K4OA 4JZ9A 2OGXA 3D2MA 2WE4A 4NDQB 2J0XA 4Q1TA 3C1NA 1E19A 2OGXB 1Z9DA 3ZZFA 2JJ4A 4AB7A 4USJA
chains in the Genus database with same CATH topology
3D40A 2BRIA 3L76A 3C20A 1B7BA 2BNDA 2W21A 3QURA 2BMUA 3T7BA 3B8GA 4I49A 4JZ8A 3ZZGA 3AB4A 2HMFA 3S6GA 1YBDA 2AKOA 4A7WA 3AAWA 4F6TA 3ZZIA 4AXSA 3LL9A 2BNFA 2V4YA 1OHAA 3WWMA 2X2WA 2J5VA 3EK5A 2A1FA 3EK6A 1OHBA 4KZTA 3K52A 3QVFA 3WWNA 2AP9A 2JJXA 2J0WA 2J4KA 2R8VA 4A7XA 3AB2A 4OLCA 3KZFA 4NDRA 1GS5A 3D2PA 2J4JA 4NDRB 4NDPA 2IJ9A 4F6TB 2J4LA 2E9YA 4NDPB 3TVIA 3S6KA 3U6UA 3ZZHA 3QVHA 2WE5A 3QUOA 2VA1A 3C1MA 2R98A 4JZ7A 3NWYA 3S6HA 2BNEA 1GSJA 3LL5A 2V5HA 2BRXA 3K56A 1OH9A 2RD5A 3K4YA 3QUNA 2BTYA 2J5TA 3LKKA 2JI5A 2WXBA 2CDQA 4NDOA 3D41A 4NDOB 3L86A 4NDQA 2BUFA 3K4OA 4JZ9A 2OGXA 3D2MA 2WE4A 4NDQB 2J0XA 4Q1TA 3C1NA 1E19A 2OGXB 1Z9DA 3ZZFA 2JJ4A 4AB7A 4USJA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 3D40 A;  2BRI A;  3L76 A;  3C20 A;  1B7B A;  2BND A;  2W21 A;  3QUR A;  2BMU A;  3T7B A;  3B8G A;  4I49 A;  4JZ8 A;  3ZZG A;  3AB4 A;  2HMF A;  3S6G A;  1YBD A;  2AKO A;  4A7W A;  3AAW A;  4F6T A;  3ZZI A;  4AXS A;  3LL9 A;  2BNF A;  2V4Y A;  1OHA A;  3WWM A;  2X2W A;  2J5V A;  3EK5 A;  2A1F A;  3EK6 A;  1OHB A;  4KZT A;  3K52 A;  3QVF A;  3WWN A;  2AP9 A;  2JJX A;  2J0W A;  2J4K A;  2R8V A;  4A7X A;  3AB2 A;  4OLC A;  3KZF A;  4NDR A;  1GS5 A;  3D2P A;  2J4J A;  4NDR B;  4NDP A;  2IJ9 A;  4F6T B;  2J4L A;  2E9Y A;  4NDP B;  3TVI A;  3S6K A;  3U6U A;  3ZZH A;  3QVH A;  2WE5 A;  3QUO A;  2VA1 A;  3C1M A;  2R98 A;  4JZ7 A;  3NWY A;  3S6H A;  2BNE A;  1GSJ A;  3LL5 A;  2V5H A;  2BRX A;  3K56 A;  1OH9 A;  2RD5 A;  3K4Y A;  3QUN A;  2BTY A;  2J5T A;  3LKK A;  2JI5 A;  2WXB A;  2CDQ A;  4NDO A;  3D41 A;  4NDO B;  3L86 A;  4NDQ A;  2BUF A;  3K4O A;  4JZ9 A;  2OGX A;  3D2M A;  2WE4 A;  4NDQ B;  2J0X A;  4Q1T A;  3C1N A;  1E19 A;  2OGX B;  1Z9D A;  3ZZF A;  2JJ4 A;  4AB7 A;  4USJ A; 
#chains in the Genus database with same CATH topology
 3D40 A;  2BRI A;  3L76 A;  3C20 A;  1B7B A;  2BND A;  2W21 A;  3QUR A;  2BMU A;  3T7B A;  3B8G A;  4I49 A;  4JZ8 A;  3ZZG A;  3AB4 A;  2HMF A;  3S6G A;  1YBD A;  2AKO A;  4A7W A;  3AAW A;  4F6T A;  3ZZI A;  4AXS A;  3LL9 A;  2BNF A;  2V4Y A;  1OHA A;  3WWM A;  2X2W A;  2J5V A;  3EK5 A;  2A1F A;  3EK6 A;  1OHB A;  4KZT A;  3K52 A;  3QVF A;  3WWN A;  2AP9 A;  2JJX A;  2J0W A;  2J4K A;  2R8V A;  4A7X A;  3AB2 A;  4OLC A;  3KZF A;  4NDR A;  1GS5 A;  3D2P A;  2J4J A;  4NDR B;  4NDP A;  2IJ9 A;  4F6T B;  2J4L A;  2E9Y A;  4NDP B;  3TVI A;  3S6K A;  3U6U A;  3ZZH A;  3QVH A;  2WE5 A;  3QUO A;  2VA1 A;  3C1M A;  2R98 A;  4JZ7 A;  3NWY A;  3S6H A;  2BNE A;  1GSJ A;  3LL5 A;  2V5H A;  2BRX A;  3K56 A;  1OH9 A;  2RD5 A;  3K4Y A;  3QUN A;  2BTY A;  2J5T A;  3LKK A;  2JI5 A;  2WXB A;  2CDQ A;  4NDO A;  3D41 A;  4NDO B;  3L86 A;  4NDQ A;  2BUF A;  3K4O A;  4JZ9 A;  2OGX A;  3D2M A;  2WE4 A;  4NDQ B;  2J0X A;  4Q1T A;  3C1N A;  1E19 A;  2OGX B;  1Z9D A;  3ZZF A;  2JJ4 A;  4AB7 A;  4USJ A; 
#chains in the Genus database with same CATH homology
 3D40 A;  2BRI A;  3L76 A;  3C20 A;  1B7B A;  2BND A;  2W21 A;  3QUR A;  2BMU A;  3T7B A;  3B8G A;  4I49 A;  4JZ8 A;  3ZZG A;  3AB4 A;  2HMF A;  3S6G A;  1YBD A;  2AKO A;  4A7W A;  3AAW A;  4F6T A;  3ZZI A;  4AXS A;  3LL9 A;  2BNF A;  2V4Y A;  1OHA A;  3WWM A;  2X2W A;  2J5V A;  3EK5 A;  2A1F A;  3EK6 A;  1OHB A;  4KZT A;  3K52 A;  3QVF A;  3WWN A;  2AP9 A;  2JJX A;  2J0W A;  2J4K A;  2R8V A;  4A7X A;  3AB2 A;  4OLC A;  3KZF A;  4NDR A;  1GS5 A;  3D2P A;  2J4J A;  4NDR B;  4NDP A;  2IJ9 A;  4F6T B;  2J4L A;  2E9Y A;  4NDP B;  3TVI A;  3S6K A;  3U6U A;  3ZZH A;  3QVH A;  2WE5 A;  3QUO A;  2VA1 A;  3C1M A;  2R98 A;  4JZ7 A;  3NWY A;  3S6H A;  2BNE A;  1GSJ A;  3LL5 A;  2V5H A;  2BRX A;  3K56 A;  1OH9 A;  2RD5 A;  3K4Y A;  3QUN A;  2BTY A;  2J5T A;  3LKK A;  2JI5 A;  2WXB A;  2CDQ A;  4NDO A;  3D41 A;  4NDO B;  3L86 A;  4NDQ A;  2BUF A;  3K4O A;  4JZ9 A;  2OGX A;  3D2M A;  2WE4 A;  4NDQ B;  2J0X A;  4Q1T A;  3C1N A;  1E19 A;  2OGX B;  1Z9D A;  3ZZF A;  2JJ4 A;  4AB7 A;  4USJ A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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