2BUFA

Arginine feed-back inhibitable acetylglutamate kinase
Total Genus 88
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
300
structure length
292
Chain Sequence
TLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKRH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE
molecule tags Transferase
source organism Pseudomonas aeruginosa
total genus 88
structure length 292
sequence length 300
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2bufA00
2R8VA 3QVFA 2CDQA 4JZ9A 4I49A 2WE5A 4NDPA 3B8GA 2WXBA 2BNDA 2JJ4A 2V5HA 3QUOA 2BNEA 2JJXA 2J4LA 4Q1TA 3L86A 4AXSA 2RD5A 3L76A 1YBDA 2WE4A 1OHBA 3EK5A 3C20A 3LKKA 3ZZGA 2AKOA 3U6UA 3S6HA 2AP9A 3T7BA 3ZZFA 3D41A 4NDQB 2OGXA 4KZTA 3ZZHA 1GS5A 4JZ7A 3QVHA 2OGXB 2J0XA 1B7BA 1OH9A 3EK6A 2J0WA 3AAWA 3C1MA 3S6KA 2R98A 3K52A 3ZZIA 3C1NA 4NDQA 1OHAA 3S6GA 2BTYA 4AB7A 2W21A 1E19A 2J4KA 4NDOB 2A1FA 2BNFA 3LL9A 3D2MA 2BMUA 3LL5A 2BRIA 4A7XA 3QURA 4JZ8A 3AB2A 2J5VA 4NDRA 2J5TA 2BUFA 3D40A 3K56A 4NDOA 4NDRB 4OLCA 3K4OA 1Z9DA 2J4JA 3WWNA 2VA1A 2X2WA 3QUNA 2HMFA 4USJA 2V4YA 3AB4A 3WWMA 3KZFA 4F6TA 4NDPB 1GSJA 3D2PA 4A7WA 2IJ9A 2JI5A 2E9YA 2BRXA 4F6TB 3K4YA 3NWYA 3TVIA
chains in the Genus database with same CATH superfamily
2R8VA 3QVFA 2CDQA 4JZ9A 4I49A 2WE5A 4NDPA 3B8GA 2WXBA 2BNDA 2JJ4A 2V5HA 3QUOA 2BNEA 2JJXA 2J4LA 4Q1TA 3L86A 4AXSA 2RD5A 3L76A 1YBDA 2WE4A 1OHBA 3EK5A 3C20A 3LKKA 3ZZGA 2AKOA 3U6UA 3S6HA 2AP9A 3T7BA 3ZZFA 3D41A 4NDQB 2OGXA 4KZTA 3ZZHA 1GS5A 4JZ7A 3QVHA 2OGXB 2J0XA 1B7BA 1OH9A 3EK6A 2J0WA 3AAWA 3C1MA 3S6KA 2R98A 3K52A 3ZZIA 3C1NA 4NDQA 1OHAA 3S6GA 2BTYA 4AB7A 2W21A 1E19A 2J4KA 4NDOB 2A1FA 2BNFA 3LL9A 3D2MA 2BMUA 3LL5A 2BRIA 4A7XA 3QURA 4JZ8A 3AB2A 2J5VA 4NDRA 2J5TA 2BUFA 3D40A 3K56A 4NDOA 4NDRB 4OLCA 3K4OA 1Z9DA 2J4JA 3WWNA 2VA1A 2X2WA 3QUNA 2HMFA 4USJA 2V4YA 3AB4A 3WWMA 3KZFA 4F6TA 4NDPB 1GSJA 3D2PA 4A7WA 2IJ9A 2JI5A 2E9YA 2BRXA 4F6TB 3K4YA 3NWYA 3TVIA
chains in the Genus database with same CATH topology
2R8VA 3QVFA 2CDQA 4JZ9A 4I49A 2WE5A 4NDPA 3B8GA 2WXBA 2BNDA 2JJ4A 2V5HA 3QUOA 2BNEA 2JJXA 2J4LA 4Q1TA 3L86A 4AXSA 2RD5A 3L76A 1YBDA 2WE4A 1OHBA 3EK5A 3C20A 3LKKA 3ZZGA 2AKOA 3U6UA 3S6HA 2AP9A 3T7BA 3ZZFA 3D41A 4NDQB 2OGXA 4KZTA 3ZZHA 1GS5A 4JZ7A 3QVHA 2OGXB 2J0XA 1B7BA 1OH9A 3EK6A 2J0WA 3AAWA 3C1MA 3S6KA 2R98A 3K52A 3ZZIA 3C1NA 4NDQA 1OHAA 3S6GA 2BTYA 4AB7A 2W21A 1E19A 2J4KA 4NDOB 2A1FA 2BNFA 3LL9A 3D2MA 2BMUA 3LL5A 2BRIA 4A7XA 3QURA 4JZ8A 3AB2A 2J5VA 4NDRA 2J5TA 2BUFA 3D40A 3K56A 4NDOA 4NDRB 4OLCA 3K4OA 1Z9DA 2J4JA 3WWNA 2VA1A 2X2WA 3QUNA 2HMFA 4USJA 2V4YA 3AB4A 3WWMA 3KZFA 4F6TA 4NDPB 1GSJA 3D2PA 4A7WA 2IJ9A 2JI5A 2E9YA 2BRXA 4F6TB 3K4YA 3NWYA 3TVIA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2R8V A;  3QVF A;  2CDQ A;  4JZ9 A;  4I49 A;  2WE5 A;  4NDP A;  3B8G A;  2WXB A;  2BND A;  2JJ4 A;  2V5H A;  3QUO A;  2BNE A;  2JJX A;  2J4L A;  4Q1T A;  3L86 A;  4AXS A;  2RD5 A;  3L76 A;  1YBD A;  2WE4 A;  1OHB A;  3EK5 A;  3C20 A;  3LKK A;  3ZZG A;  2AKO A;  3U6U A;  3S6H A;  2AP9 A;  3T7B A;  3ZZF A;  3D41 A;  4NDQ B;  2OGX A;  4KZT A;  3ZZH A;  1GS5 A;  4JZ7 A;  3QVH A;  2OGX B;  2J0X A;  1B7B A;  1OH9 A;  3EK6 A;  2J0W A;  3AAW A;  3C1M A;  3S6K A;  2R98 A;  3K52 A;  3ZZI A;  3C1N A;  4NDQ A;  1OHA A;  3S6G A;  2BTY A;  4AB7 A;  2W21 A;  1E19 A;  2J4K A;  4NDO B;  2A1F A;  2BNF A;  3LL9 A;  3D2M A;  2BMU A;  3LL5 A;  2BRI A;  4A7X A;  3QUR A;  4JZ8 A;  3AB2 A;  2J5V A;  4NDR A;  2J5T A;  2BUF A;  3D40 A;  3K56 A;  4NDO A;  4NDR B;  4OLC A;  3K4O A;  1Z9D A;  2J4J A;  3WWN A;  2VA1 A;  2X2W A;  3QUN A;  2HMF A;  4USJ A;  2V4Y A;  3AB4 A;  3WWM A;  3KZF A;  4F6T A;  4NDP B;  1GSJ A;  3D2P A;  4A7W A;  2IJ9 A;  2JI5 A;  2E9Y A;  2BRX A;  4F6T B;  3K4Y A;  3NWY A;  3TVI A; 
#chains in the Genus database with same CATH topology
 2R8V A;  3QVF A;  2CDQ A;  4JZ9 A;  4I49 A;  2WE5 A;  4NDP A;  3B8G A;  2WXB A;  2BND A;  2JJ4 A;  2V5H A;  3QUO A;  2BNE A;  2JJX A;  2J4L A;  4Q1T A;  3L86 A;  4AXS A;  2RD5 A;  3L76 A;  1YBD A;  2WE4 A;  1OHB A;  3EK5 A;  3C20 A;  3LKK A;  3ZZG A;  2AKO A;  3U6U A;  3S6H A;  2AP9 A;  3T7B A;  3ZZF A;  3D41 A;  4NDQ B;  2OGX A;  4KZT A;  3ZZH A;  1GS5 A;  4JZ7 A;  3QVH A;  2OGX B;  2J0X A;  1B7B A;  1OH9 A;  3EK6 A;  2J0W A;  3AAW A;  3C1M A;  3S6K A;  2R98 A;  3K52 A;  3ZZI A;  3C1N A;  4NDQ A;  1OHA A;  3S6G A;  2BTY A;  4AB7 A;  2W21 A;  1E19 A;  2J4K A;  4NDO B;  2A1F A;  2BNF A;  3LL9 A;  3D2M A;  2BMU A;  3LL5 A;  2BRI A;  4A7X A;  3QUR A;  4JZ8 A;  3AB2 A;  2J5V A;  4NDR A;  2J5T A;  2BUF A;  3D40 A;  3K56 A;  4NDO A;  4NDR B;  4OLC A;  3K4O A;  1Z9D A;  2J4J A;  3WWN A;  2VA1 A;  2X2W A;  3QUN A;  2HMF A;  4USJ A;  2V4Y A;  3AB4 A;  3WWM A;  3KZF A;  4F6T A;  4NDP B;  1GSJ A;  3D2P A;  4A7W A;  2IJ9 A;  2JI5 A;  2E9Y A;  2BRX A;  4F6T B;  3K4Y A;  3NWY A;  3TVI A; 
#chains in the Genus database with same CATH homology
 2R8V A;  3QVF A;  2CDQ A;  4JZ9 A;  4I49 A;  2WE5 A;  4NDP A;  3B8G A;  2WXB A;  2BND A;  2JJ4 A;  2V5H A;  3QUO A;  2BNE A;  2JJX A;  2J4L A;  4Q1T A;  3L86 A;  4AXS A;  2RD5 A;  3L76 A;  1YBD A;  2WE4 A;  1OHB A;  3EK5 A;  3C20 A;  3LKK A;  3ZZG A;  2AKO A;  3U6U A;  3S6H A;  2AP9 A;  3T7B A;  3ZZF A;  3D41 A;  4NDQ B;  2OGX A;  4KZT A;  3ZZH A;  1GS5 A;  4JZ7 A;  3QVH A;  2OGX B;  2J0X A;  1B7B A;  1OH9 A;  3EK6 A;  2J0W A;  3AAW A;  3C1M A;  3S6K A;  2R98 A;  3K52 A;  3ZZI A;  3C1N A;  4NDQ A;  1OHA A;  3S6G A;  2BTY A;  4AB7 A;  2W21 A;  1E19 A;  2J4K A;  4NDO B;  2A1F A;  2BNF A;  3LL9 A;  3D2M A;  2BMU A;  3LL5 A;  2BRI A;  4A7X A;  3QUR A;  4JZ8 A;  3AB2 A;  2J5V A;  4NDR A;  2J5T A;  2BUF A;  3D40 A;  3K56 A;  4NDO A;  4NDR B;  4OLC A;  3K4O A;  1Z9D A;  2J4J A;  3WWN A;  2VA1 A;  2X2W A;  3QUN A;  2HMF A;  4USJ A;  2V4Y A;  3AB4 A;  3WWM A;  3KZF A;  4F6T A;  4NDP B;  1GSJ A;  3D2P A;  4A7W A;  2IJ9 A;  2JI5 A;  2E9Y A;  2BRX A;  4F6T B;  3K4Y A;  3NWY A;  3TVI A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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