2BZMA

Solution structure of the primary host recognition region of complement factor h
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
129
structure length
129
Chain Sequence
EAEFGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRNGQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTCAKR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Immune system
molecule keywords COMPLEMENT FACTOR H
publication title Disease-Associated Sequence Variations Congregate in a Polyanion Recognition Patch on Human Factor H Revealed in Three-Dimensional Structure.
pubmed doi rcsb
source organism Homo sapiens
total genus 11
structure length 129
sequence length 129
ec nomenclature
pdb deposition date 2005-08-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2bzmA01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2bzmA02
3IU3I 3OP8A 1GHQB 2EHFA 4IGDA 4C16A 3GXEA 2RL0A 1HFIA 3GOVA 4MUCA 3O8EB 2W81A 3CALA 2CG6A 2JGWA 2V8EA 4AYMA 5I0QB 4ONTD 1UOTP 3RJ3D 1GKGA 1QGBA 1NWVA 3ZD1A 1H2QP 2YRAA 4AYEA 2XRBA 1G4GA 2RLQA 2XRDA 4JHSA 4B2RA 1E5GA 1GPZA 5HZPB 1H03P 4J38B 1ELVA 1OK9A 1OK3A 4A5WB 2IZ3A 2B5ID 3R62A 3OEDC 1OJYA 1HFHA 2IZ4A 1E88A 5HYPA 4B2SA 2RKZA 2JGXA 3ZD2A 2O39C 4LOSA 1SS2A 1TPMA 4AYDA 3L89M 1VVCA 1QO6A 3SW0X 4PZ5A 5HYTB 2LOJA 1HCCA 3KXVA 2XWBF 3ERBA 1VVDA 3OXUD 1QUBA 1U5MA 4KKDA 2XWJI 3IX0A 3NFPI 1OJWA 1LY2A 1OK1A 3KZJA 2RLPA 2EC3A 2WIIC 4AYIA 3EJHA 4CSYA 1G4FA 1PPQA 4WJG2 2QY0A 5HYUB 2UWNA 2MCZA 1MD8A 1OK2A 2YBYA 1C1ZA 5FO8C 2XQWC 2KMSA 2CKUA 1Z92B 4K12A 2JRAA 2W80A 4LOTA 1E8BA 2RKYA 1ZJKA 4F4OC 3INBC 5JPMG 2KRIA 1MD7A 4FXGG 2ERJA 3T5OA 2BZMA 2CG7A 2MCYA 1SRZA 1FBRA 3M7PA 3ZRZA 4DJZA 2G7IA 1H04P 4ZH1D 4YNXA 3TVJA 1OJVA 1TPGA 1TPNA 1H2PP 1O9AA 1GKNA 3MQLA 1CKLA 1Q3XA 2A55A
chains in the Genus database with same CATH superfamily
4YIZA 3FGTA 3IU3I 3OP8A 1GHQB 2EHFA 4IGDA 4C16A 4N7EA 3GXEA 2RL0A 1HFIA 3GOVA 4MUCA 2Y8TA 3O8EB 2W81A 4MSLA 3VWOA 3CALA 2CG6A 2JGWA 2V8EA 4AYMA 5I0QB 4ONTD 1UOTP 3RJ3D 4BWCA 1GKGA 1QGBA 1RLHA 1NWVA 3ZD1A 1H2QP 2YRAA 3FGRA 3WSXA 4AYEA 2XRBA 1G4GA 2RLQA 2XRDA 4JHSA 4B2RA 1E5GA 1GPZA 5DN5A 5HZPB 1H03P 4J38B 1ELVA 1OK9A 1OK3A 2I2LA 4A5WB 2IZ3A 2B5ID 3R62A 5DN4A 3OEDC 1OJYA 1HFHA 2IZ4A 1E88A 5HYPA 4B2SA 2RKZA 2JGXA 3ZD2A 2O39C 4LOSA 1SS2A 1TPMA 4AYDA 3L89M 1VVCA 1QO6A 2Y8RA 3NJAA 2ZYCA 3SW0X 4PZ5A 3ZLEA 5HYTB 2LOJA 1HCCA 2Y8SA 2XWBF 3ERBA 3KXVA 4APLA 1VVDA 3OXUD 1QUBA 1U5MA 4KKDA 2XWJI 3IX0A 3NFPI 1OJWA 1LY2A 1OK1A 3KZJA 3CI0J 2RLPA 2EC3A 2WIIC 4AYIA 3EJHA 4CSYA 1G4FA 1PPQA 4WJG2 2QY0A 5HYUB 2UWNA 2MCZA 1MD8A 1OK2A 2YBYA 1C1ZA 5FO8C 2XQWC 2KMSA 2CKUA 1Z92B 4K12A 2JRAA 2W80A 3ZLDA 4LOTA 1E8BA 2RKYA 1ZJKA 4F4OC 3F6KA 3WSYA 3INBC 5JPMG 2KRIA 1MD7A 4FXGG 2ERJA 3T5OA 2BZMA 2CG7A 2MCYA 1SRZA 1FBRA 3M7PA 3ZRZA 4DJZA 2G7IA 1H04P 4ZH1D 4YNXA 3TVJA 1OJVA 1TPGA 1TPNA 1H2PP 1O9AA 2X2ZA 1GKNA 3K3TA 1CKLA 3MQLA 1Q3XA 4PO7A 2A55A
chains in the Genus database with same CATH topology
3IU3I 3OP8A 1GHQB 2EHFA 4IGDA 4C16A 3GXEA 2RL0A 1HFIA 3GOVA 4MUCA 3O8EB 2W81A 3CALA 2CG6A 2JGWA 2V8EA 4AYMA 5I0QB 4ONTD 1UOTP 3RJ3D 1GKGA 1QGBA 1NWVA 3ZD1A 1H2QP 2YRAA 4AYEA 2XRBA 1G4GA 2RLQA 2XRDA 4JHSA 4B2RA 1E5GA 1GPZA 5HZPB 1H03P 4J38B 1ELVA 1OK9A 1OK3A 4A5WB 2IZ3A 2B5ID 3R62A 3OEDC 1OJYA 1HFHA 2IZ4A 1E88A 5HYPA 4B2SA 2RKZA 2JGXA 3ZD2A 2O39C 4LOSA 1SS2A 1TPMA 4AYDA 3L89M 1VVCA 1QO6A 3SW0X 4PZ5A 5HYTB 2LOJA 1HCCA 3KXVA 2XWBF 3ERBA 1VVDA 3OXUD 1QUBA 1U5MA 4KKDA 2XWJI 3IX0A 3NFPI 1OJWA 1LY2A 1OK1A 3KZJA 2RLPA 2EC3A 2WIIC 4AYIA 3EJHA 4CSYA 1G4FA 1PPQA 4WJG2 2QY0A 5HYUB 2UWNA 2MCZA 1MD8A 1OK2A 2YBYA 1C1ZA 5FO8C 2XQWC 2KMSA 2CKUA 1Z92B 4K12A 2JRAA 2W80A 4LOTA 1E8BA 2RKYA 1ZJKA 4F4OC 3INBC 5JPMG 2KRIA 1MD7A 4FXGG 2ERJA 3T5OA 2BZMA 2CG7A 2MCYA 1SRZA 1FBRA 3M7PA 3ZRZA 4DJZA 2G7IA 1H04P 4ZH1D 4YNXA 3TVJA 1OJVA 1TPGA 1TPNA 1H2PP 1O9AA 1GKNA 3MQLA 1CKLA 1Q3XA 2A55A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3IU3 I;  3OP8 A;  1GHQ B;  2EHF A;  4IGD A;  4C16 A;  3GXE A;  2RL0 A;  1HFI A;  3GOV A;  4MUC A;  3O8E B;  2W81 A;  3CAL A;  2CG6 A;  2JGW A;  2V8E A;  4AYM A;  5I0Q B;  4ONT D;  1UOT P;  3RJ3 D;  1GKG A;  1QGB A;  1NWV A;  3ZD1 A;  1H2Q P;  2YRA A;  4AYE A;  2XRB A;  1G4G A;  2RLQ A;  2XRD A;  4JHS A;  4B2R A;  1E5G A;  1GPZ A;  5HZP B;  1H03 P;  4J38 B;  1ELV A;  1OK9 A;  1OK3 A;  4A5W B;  2IZ3 A;  2B5I D;  3R62 A;  3OED C;  1OJY A;  1HFH A;  2IZ4 A;  1E88 A;  5HYP A;  4B2S A;  2RKZ A;  2JGX A;  3ZD2 A;  2O39 C;  4LOS A;  1SS2 A;  1TPM A;  4AYD A;  3L89 M;  1VVC A;  1QO6 A;  3SW0 X;  4PZ5 A;  5HYT B;  2LOJ A;  1HCC A;  3KXV A;  2XWB F;  3ERB A;  1VVD A;  3OXU D;  1QUB A;  1U5M A;  4KKD A;  2XWJ I;  3IX0 A;  3NFP I;  1OJW A;  1LY2 A;  1OK1 A;  3KZJ A;  2RLP A;  2EC3 A;  2WII C;  4AYI A;  3EJH A;  4CSY A;  1G4F A;  1PPQ A;  4WJG 2;  2QY0 A;  5HYU B;  2UWN A;  2MCZ A;  1MD8 A;  1OK2 A;  2YBY A;  1C1Z A;  5FO8 C;  2XQW C;  2KMS A;  2CKU A;  1Z92 B;  4K12 A;  2JRA A;  2W80 A;  4LOT A;  1E8B A;  2RKY A;  1ZJK A;  4F4O C;  3INB C;  5JPM G;  2KRI A;  1MD7 A;  4FXG G;  2ERJ A;  3T5O A;  2BZM A;  2CG7 A;  2MCY A;  1SRZ A;  1FBR A;  3M7P A;  3ZRZ A;  4DJZ A;  2G7I A;  1H04 P;  4ZH1 D;  4YNX A;  3TVJ A;  1OJV A;  1TPG A;  1TPN A;  1H2P P;  1O9A A;  1GKN A;  3MQL A;  1CKL A;  1Q3X A;  2A55 A; 
#chains in the Genus database with same CATH topology
 4YIZ A;  3FGT A;  3IU3 I;  3OP8 A;  1GHQ B;  2EHF A;  4IGD A;  4C16 A;  4N7E A;  3GXE A;  2RL0 A;  1HFI A;  3GOV A;  4MUC A;  2Y8T A;  3O8E B;  2W81 A;  4MSL A;  3VWO A;  3CAL A;  2CG6 A;  2JGW A;  2V8E A;  4AYM A;  5I0Q B;  4ONT D;  1UOT P;  3RJ3 D;  4BWC A;  1GKG A;  1QGB A;  1RLH A;  1NWV A;  3ZD1 A;  1H2Q P;  2YRA A;  3FGR A;  3WSX A;  4AYE A;  2XRB A;  1G4G A;  2RLQ A;  2XRD A;  4JHS A;  4B2R A;  1E5G A;  1GPZ A;  5DN5 A;  5HZP B;  1H03 P;  4J38 B;  1ELV A;  1OK9 A;  1OK3 A;  2I2L A;  4A5W B;  2IZ3 A;  2B5I D;  3R62 A;  5DN4 A;  3OED C;  1OJY A;  1HFH A;  2IZ4 A;  1E88 A;  5HYP A;  4B2S A;  2RKZ A;  2JGX A;  3ZD2 A;  2O39 C;  4LOS A;  1SS2 A;  1TPM A;  4AYD A;  3L89 M;  1VVC A;  1QO6 A;  2Y8R A;  3NJA A;  2ZYC A;  3SW0 X;  4PZ5 A;  3ZLE A;  5HYT B;  2LOJ A;  1HCC A;  2Y8S A;  2XWB F;  3ERB A;  3KXV A;  4APL A;  1VVD A;  3OXU D;  1QUB A;  1U5M A;  4KKD A;  2XWJ I;  3IX0 A;  3NFP I;  1OJW A;  1LY2 A;  1OK1 A;  3KZJ A;  3CI0 J;  2RLP A;  2EC3 A;  2WII C;  4AYI A;  3EJH A;  4CSY A;  1G4F A;  1PPQ A;  4WJG 2;  2QY0 A;  5HYU B;  2UWN A;  2MCZ A;  1MD8 A;  1OK2 A;  2YBY A;  1C1Z A;  5FO8 C;  2XQW C;  2KMS A;  2CKU A;  1Z92 B;  4K12 A;  2JRA A;  2W80 A;  3ZLD A;  4LOT A;  1E8B A;  2RKY A;  1ZJK A;  4F4O C;  3F6K A;  3WSY A;  3INB C;  5JPM G;  2KRI A;  1MD7 A;  4FXG G;  2ERJ A;  3T5O A;  2BZM A;  2CG7 A;  2MCY A;  1SRZ A;  1FBR A;  3M7P A;  3ZRZ A;  4DJZ A;  2G7I A;  1H04 P;  4ZH1 D;  4YNX A;  3TVJ A;  1OJV A;  1TPG A;  1TPN A;  1H2P P;  1O9A A;  2X2Z A;  1GKN A;  3K3T A;  1CKL A;  3MQL A;  1Q3X A;  4PO7 A;  2A55 A; 
#chains in the Genus database with same CATH homology
 3IU3 I;  3OP8 A;  1GHQ B;  2EHF A;  4IGD A;  4C16 A;  3GXE A;  2RL0 A;  1HFI A;  3GOV A;  4MUC A;  3O8E B;  2W81 A;  3CAL A;  2CG6 A;  2JGW A;  2V8E A;  4AYM A;  5I0Q B;  4ONT D;  1UOT P;  3RJ3 D;  1GKG A;  1QGB A;  1NWV A;  3ZD1 A;  1H2Q P;  2YRA A;  4AYE A;  2XRB A;  1G4G A;  2RLQ A;  2XRD A;  4JHS A;  4B2R A;  1E5G A;  1GPZ A;  5HZP B;  1H03 P;  4J38 B;  1ELV A;  1OK9 A;  1OK3 A;  4A5W B;  2IZ3 A;  2B5I D;  3R62 A;  3OED C;  1OJY A;  1HFH A;  2IZ4 A;  1E88 A;  5HYP A;  4B2S A;  2RKZ A;  2JGX A;  3ZD2 A;  2O39 C;  4LOS A;  1SS2 A;  1TPM A;  4AYD A;  3L89 M;  1VVC A;  1QO6 A;  3SW0 X;  4PZ5 A;  5HYT B;  2LOJ A;  1HCC A;  3KXV A;  2XWB F;  3ERB A;  1VVD A;  3OXU D;  1QUB A;  1U5M A;  4KKD A;  2XWJ I;  3IX0 A;  3NFP I;  1OJW A;  1LY2 A;  1OK1 A;  3KZJ A;  2RLP A;  2EC3 A;  2WII C;  4AYI A;  3EJH A;  4CSY A;  1G4F A;  1PPQ A;  4WJG 2;  2QY0 A;  5HYU B;  2UWN A;  2MCZ A;  1MD8 A;  1OK2 A;  2YBY A;  1C1Z A;  5FO8 C;  2XQW C;  2KMS A;  2CKU A;  1Z92 B;  4K12 A;  2JRA A;  2W80 A;  4LOT A;  1E8B A;  2RKY A;  1ZJK A;  4F4O C;  3INB C;  5JPM G;  2KRI A;  1MD7 A;  4FXG G;  2ERJ A;  3T5O A;  2BZM A;  2CG7 A;  2MCY A;  1SRZ A;  1FBR A;  3M7P A;  3ZRZ A;  4DJZ A;  2G7I A;  1H04 P;  4ZH1 D;  4YNX A;  3TVJ A;  1OJV A;  1TPG A;  1TPN A;  1H2P P;  1O9A A;  1GKN A;  3MQL A;  1CKL A;  1Q3X A;  2A55 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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