2C8AA

Structure of the wild-type c3bot1 exoenzyme (nicotinamide-bound state, crystal form i)
Total Genus 71
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
208
structure length
208
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords MONO-ADP-RIBOSYLTRANSFERASE C3
publication title Structural Basis for the Nad-Hydrolysis Mechanism and the Artt-Loop Plasticity of C3 Exoenzymes.
pubmed doi rcsb
source organism Clostridium botulinum
total genus 71
structure length 208
sequence length 208
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-12-03
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2c8aA00
3BW8A 4H03A 1GY0A 1GZFA 2J3ZA 4PKWA 4XM7A 2C89A 1J7NA 4FMLA 4WF6A 2C8GA 3BUZA 4XM8A 1R45A 4PKSA 4DV8A 2WN6A 2WN5A 2J3XA 2GWLA 4PKTA 4PKRA 5DZQA 3NTSA 1OG1A 4H0TA 4XSGB 1OG4A 2A78B 2C8EE 5H03A 1GXZA 1PWPA 2C8CA 2GWMA 2WN4A 1R4BA 1G24A 1PWQA 1YQYA 4PKQA 4H0VA 2C8HA 5GTTA 1ZXVA 1PWUA 1GIQA 2C8FE 2A9KB 4TR5A 4GY2A 5D1TA 1PWWA 2J3VA 4PKUA 2C8BX 2C8DA 1OG3A 1PWVA 1OJZA 1OJQA 2WN8A 5D1SA 1GIRA 1GXYA 1QS1A 4PKVA 1QS2A 2BOVB 1GZEA 5BWMB 4ELNA 4XSHB 4H0XA 4XM6A 3U0JA 2C8AA 2WN7A 4GF1A 5H04A 4FXQA 1JKYA 5D1UA 4FK7A 1UZIA 4H0YA
chains in the Genus database with same CATH superfamily
3BW8A 4H03A 1GY0A 1GZFA 2J3ZA 4PKWA 4XM7A 2C89A 1J7NA 4FMLA 4WF6A 2C8GA 3BUZA 4XM8A 1R45A 4PKSA 4DV8A 2WN6A 2WN5A 2J3XA 2GWLA 4PKTA 4PKRA 5DZQA 3NTSA 1OG1A 4H0TA 4XSGB 1OG4A 2A78B 2C8EE 5H03A 1GXZA 1PWPA 2C8CA 2GWMA 2WN4A 1R4BA 1G24A 1PWQA 1YQYA 4PKQA 4H0VA 2C8HA 5GTTA 1ZXVA 1PWUA 1GIQA 2C8FE 2A9KB 4TR5A 4GY2A 5D1TA 1PWWA 2J3VA 4PKUA 2C8BX 2C8DA 1OG3A 1PWVA 1OJZA 1OJQA 2WN8A 5D1SA 1GIRA 1GXYA 1QS1A 4PKVA 1QS2A 2BOVB 1GZEA 5BWMB 4ELNA 4XSHB 4H0XA 4XM6A 3U0JA 2C8AA 2WN7A 4GF1A 5H04A 4FXQA 1JKYA 5D1UA 4FK7A 1UZIA 4H0YA
chains in the Genus database with same CATH topology
3BW8A 4H03A 1GY0A 1GZFA 2J3ZA 4PKWA 4XM7A 2C89A 1J7NA 4FMLA 4WF6A 2C8GA 3BUZA 4XM8A 1R45A 4PKSA 4DV8A 2WN6A 2WN5A 2J3XA 2GWLA 4PKTA 4PKRA 5DZQA 3NTSA 1OG1A 4H0TA 4XSGB 1OG4A 2A78B 2C8EE 5H03A 1GXZA 1PWPA 2C8CA 2GWMA 2WN4A 1R4BA 1G24A 1PWQA 1YQYA 4PKQA 4H0VA 2C8HA 5GTTA 1ZXVA 1PWUA 1GIQA 2C8FE 2A9KB 4TR5A 4GY2A 5D1TA 1PWWA 2J3VA 4PKUA 2C8BX 2C8DA 1OG3A 1PWVA 1OJZA 1OJQA 2WN8A 5D1SA 1GIRA 1GXYA 1QS1A 4PKVA 1QS2A 2BOVB 1GZEA 5BWMB 4ELNA 4XSHB 4H0XA 4XM6A 3U0JA 2C8AA 2WN7A 4GF1A 5H04A 4FXQA 1JKYA 5D1UA 4FK7A 1UZIA 4H0YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BW8 A;  4H03 A;  1GY0 A;  1GZF A;  2J3Z A;  4PKW A;  4XM7 A;  2C89 A;  1J7N A;  4FML A;  4WF6 A;  2C8G A;  3BUZ A;  4XM8 A;  1R45 A;  4PKS A;  4DV8 A;  2WN6 A;  2WN5 A;  2J3X A;  2GWL A;  4PKT A;  4PKR A;  5DZQ A;  3NTS A;  1OG1 A;  4H0T A;  4XSG B;  1OG4 A;  2A78 B;  2C8E E;  5H03 A;  1GXZ A;  1PWP A;  2C8C A;  2GWM A;  2WN4 A;  1R4B A;  1G24 A;  1PWQ A;  1YQY A;  4PKQ A;  4H0V A;  2C8H A;  5GTT A;  1ZXV A;  1PWU A;  1GIQ A;  2C8F E;  2A9K B;  4TR5 A;  4GY2 A;  5D1T A;  1PWW A;  2J3V A;  4PKU A;  2C8B X;  2C8D A;  1OG3 A;  1PWV A;  1OJZ A;  1OJQ A;  2WN8 A;  5D1S A;  1GIR A;  1GXY A;  1QS1 A;  4PKV A;  1QS2 A;  2BOV B;  1GZE A;  5BWM B;  4ELN A;  4XSH B;  4H0X A;  4XM6 A;  3U0J A;  2C8A A;  2WN7 A;  4GF1 A;  5H04 A;  4FXQ A;  1JKY A;  5D1U A;  4FK7 A;  1UZI A;  4H0Y A; 
#chains in the Genus database with same CATH topology
 3BW8 A;  4H03 A;  1GY0 A;  1GZF A;  2J3Z A;  4PKW A;  4XM7 A;  2C89 A;  1J7N A;  4FML A;  4WF6 A;  2C8G A;  3BUZ A;  4XM8 A;  1R45 A;  4PKS A;  4DV8 A;  2WN6 A;  2WN5 A;  2J3X A;  2GWL A;  4PKT A;  4PKR A;  5DZQ A;  3NTS A;  1OG1 A;  4H0T A;  4XSG B;  1OG4 A;  2A78 B;  2C8E E;  5H03 A;  1GXZ A;  1PWP A;  2C8C A;  2GWM A;  2WN4 A;  1R4B A;  1G24 A;  1PWQ A;  1YQY A;  4PKQ A;  4H0V A;  2C8H A;  5GTT A;  1ZXV A;  1PWU A;  1GIQ A;  2C8F E;  2A9K B;  4TR5 A;  4GY2 A;  5D1T A;  1PWW A;  2J3V A;  4PKU A;  2C8B X;  2C8D A;  1OG3 A;  1PWV A;  1OJZ A;  1OJQ A;  2WN8 A;  5D1S A;  1GIR A;  1GXY A;  1QS1 A;  4PKV A;  1QS2 A;  2BOV B;  1GZE A;  5BWM B;  4ELN A;  4XSH B;  4H0X A;  4XM6 A;  3U0J A;  2C8A A;  2WN7 A;  4GF1 A;  5H04 A;  4FXQ A;  1JKY A;  5D1U A;  4FK7 A;  1UZI A;  4H0Y A; 
#chains in the Genus database with same CATH homology
 3BW8 A;  4H03 A;  1GY0 A;  1GZF A;  2J3Z A;  4PKW A;  4XM7 A;  2C89 A;  1J7N A;  4FML A;  4WF6 A;  2C8G A;  3BUZ A;  4XM8 A;  1R45 A;  4PKS A;  4DV8 A;  2WN6 A;  2WN5 A;  2J3X A;  2GWL A;  4PKT A;  4PKR A;  5DZQ A;  3NTS A;  1OG1 A;  4H0T A;  4XSG B;  1OG4 A;  2A78 B;  2C8E E;  5H03 A;  1GXZ A;  1PWP A;  2C8C A;  2GWM A;  2WN4 A;  1R4B A;  1G24 A;  1PWQ A;  1YQY A;  4PKQ A;  4H0V A;  2C8H A;  5GTT A;  1ZXV A;  1PWU A;  1GIQ A;  2C8F E;  2A9K B;  4TR5 A;  4GY2 A;  5D1T A;  1PWW A;  2J3V A;  4PKU A;  2C8B X;  2C8D A;  1OG3 A;  1PWV A;  1OJZ A;  1OJQ A;  2WN8 A;  5D1S A;  1GIR A;  1GXY A;  1QS1 A;  4PKV A;  1QS2 A;  2BOV B;  1GZE A;  5BWM B;  4ELN A;  4XSH B;  4H0X A;  4XM6 A;  3U0J A;  2C8A A;  2WN7 A;  4GF1 A;  5H04 A;  4FXQ A;  1JKY A;  5D1U A;  4FK7 A;  1UZI A;  4H0Y A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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