2C8AA

Structure of the wild-type c3bot1 exoenzyme (nicotinamide-bound state, crystal form i)
Total Genus 71
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
71
sequence length
208
structure length
208
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSQFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINPK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords MONO-ADP-RIBOSYLTRANSFERASE C3
publication title Structural Basis for the Nad-Hydrolysis Mechanism and the Artt-Loop Plasticity of C3 Exoenzymes.
pubmed doi rcsb
source organism Clostridium botulinum
molecule tags Transferase
total genus 71
structure length 208
sequence length 208
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-12-03
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2c8aA00
1OG1A 1PWQA 4TR5A 5H03A 3NTSA 4FK7A 4H03A 2C89A 1QS1A 2C8EE 2GWMA 2WN7A 1PWVA 1R45A 1GZFA 4GF1A 5D1UA 4XM8A 2WN8A 4H0VA 1J7NA 1GXZA 1GZEA 5GTTA 4FMLA 1PWUA 1OG3A 4H0TA 3U0JA 1JKYA 4PKRA 2J3VA 5D1TA 1ZXVA 2GWLA 2J3XA 2C8HA 4H0XA 4PKTA 4XM6A 1QS2A 2WN6A 4XM7A 5H04A 5DZQA 1PWWA 4FXQA 2WN4A 1GY0A 4ELNA 2C8CA 1G24A 2J3ZA 2C8DA 5D1SA 2WN5A 4WF6A 2C8GA 4XSHB 2C8BX 2A9KB 1OG4A 4DV8A 2C8AA 3BW8A 4H0YA 1OJQA 2C8FE 4GY2A 1OJZA 4PKSA 5BWMB 3BUZA 1UZIA 1PWPA 4PKWA 2A78B 1R4BA 2BOVB 4PKVA 4PKQA 1GXYA 1GIRA 1YQYA 4PKUA 1GIQA 4XSGB
chains in the Genus database with same CATH superfamily
1OG1A 1PWQA 4TR5A 5H03A 3NTSA 4FK7A 4H03A 2C89A 1QS1A 2C8EE 2GWMA 2WN7A 1PWVA 1R45A 1GZFA 4GF1A 5D1UA 4XM8A 2WN8A 4H0VA 1J7NA 1GXZA 1GZEA 5GTTA 4FMLA 1PWUA 1OG3A 4H0TA 3U0JA 1JKYA 4PKRA 2J3VA 5D1TA 1ZXVA 2GWLA 2J3XA 2C8HA 4H0XA 4PKTA 4XM6A 1QS2A 2WN6A 4XM7A 5H04A 5DZQA 1PWWA 4FXQA 2WN4A 1GY0A 4ELNA 2C8CA 1G24A 2J3ZA 2C8DA 5D1SA 2WN5A 4WF6A 2C8GA 4XSHB 2C8BX 2A9KB 1OG4A 4DV8A 2C8AA 3BW8A 4H0YA 1OJQA 2C8FE 4GY2A 1OJZA 4PKSA 5BWMB 3BUZA 1UZIA 1PWPA 4PKWA 2A78B 1R4BA 2BOVB 4PKVA 4PKQA 1GXYA 1GIRA 1YQYA 4PKUA 1GIQA 4XSGB
chains in the Genus database with same CATH topology
1OG1A 1PWQA 4TR5A 5H03A 3NTSA 4FK7A 4H03A 2C89A 1QS1A 2C8EE 2GWMA 2WN7A 1PWVA 1R45A 1GZFA 4GF1A 5D1UA 4XM8A 2WN8A 4H0VA 1J7NA 1GXZA 1GZEA 5GTTA 4FMLA 1PWUA 1OG3A 4H0TA 3U0JA 1JKYA 4PKRA 2J3VA 5D1TA 1ZXVA 2GWLA 2J3XA 2C8HA 4H0XA 4PKTA 4XM6A 1QS2A 2WN6A 4XM7A 5H04A 5DZQA 1PWWA 4FXQA 2WN4A 1GY0A 4ELNA 2C8CA 1G24A 2J3ZA 2C8DA 5D1SA 2WN5A 4WF6A 2C8GA 4XSHB 2C8BX 2A9KB 1OG4A 4DV8A 2C8AA 3BW8A 4H0YA 1OJQA 2C8FE 4GY2A 1OJZA 4PKSA 5BWMB 3BUZA 1UZIA 1PWPA 4PKWA 2A78B 1R4BA 2BOVB 4PKVA 4PKQA 1GXYA 1GIRA 1YQYA 4PKUA 1GIQA 4XSGB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OG1 A;  1PWQ A;  4TR5 A;  5H03 A;  3NTS A;  4FK7 A;  4H03 A;  2C89 A;  1QS1 A;  2C8E E;  2GWM A;  2WN7 A;  1PWV A;  1R45 A;  1GZF A;  4GF1 A;  5D1U A;  4XM8 A;  2WN8 A;  4H0V A;  1J7N A;  1GXZ A;  1GZE A;  5GTT A;  4FML A;  1PWU A;  1OG3 A;  4H0T A;  3U0J A;  1JKY A;  4PKR A;  2J3V A;  5D1T A;  1ZXV A;  2GWL A;  2J3X A;  2C8H A;  4H0X A;  4PKT A;  4XM6 A;  1QS2 A;  2WN6 A;  4XM7 A;  5H04 A;  5DZQ A;  1PWW A;  4FXQ A;  2WN4 A;  1GY0 A;  4ELN A;  2C8C A;  1G24 A;  2J3Z A;  2C8D A;  5D1S A;  2WN5 A;  4WF6 A;  2C8G A;  4XSH B;  2C8B X;  2A9K B;  1OG4 A;  4DV8 A;  2C8A A;  3BW8 A;  4H0Y A;  1OJQ A;  2C8F E;  4GY2 A;  1OJZ A;  4PKS A;  5BWM B;  3BUZ A;  1UZI A;  1PWP A;  4PKW A;  2A78 B;  1R4B A;  2BOV B;  4PKV A;  4PKQ A;  1GXY A;  1GIR A;  1YQY A;  4PKU A;  1GIQ A;  4XSG B; 
#chains in the Genus database with same CATH topology
 1OG1 A;  1PWQ A;  4TR5 A;  5H03 A;  3NTS A;  4FK7 A;  4H03 A;  2C89 A;  1QS1 A;  2C8E E;  2GWM A;  2WN7 A;  1PWV A;  1R45 A;  1GZF A;  4GF1 A;  5D1U A;  4XM8 A;  2WN8 A;  4H0V A;  1J7N A;  1GXZ A;  1GZE A;  5GTT A;  4FML A;  1PWU A;  1OG3 A;  4H0T A;  3U0J A;  1JKY A;  4PKR A;  2J3V A;  5D1T A;  1ZXV A;  2GWL A;  2J3X A;  2C8H A;  4H0X A;  4PKT A;  4XM6 A;  1QS2 A;  2WN6 A;  4XM7 A;  5H04 A;  5DZQ A;  1PWW A;  4FXQ A;  2WN4 A;  1GY0 A;  4ELN A;  2C8C A;  1G24 A;  2J3Z A;  2C8D A;  5D1S A;  2WN5 A;  4WF6 A;  2C8G A;  4XSH B;  2C8B X;  2A9K B;  1OG4 A;  4DV8 A;  2C8A A;  3BW8 A;  4H0Y A;  1OJQ A;  2C8F E;  4GY2 A;  1OJZ A;  4PKS A;  5BWM B;  3BUZ A;  1UZI A;  1PWP A;  4PKW A;  2A78 B;  1R4B A;  2BOV B;  4PKV A;  4PKQ A;  1GXY A;  1GIR A;  1YQY A;  4PKU A;  1GIQ A;  4XSG B; 
#chains in the Genus database with same CATH homology
 1OG1 A;  1PWQ A;  4TR5 A;  5H03 A;  3NTS A;  4FK7 A;  4H03 A;  2C89 A;  1QS1 A;  2C8E E;  2GWM A;  2WN7 A;  1PWV A;  1R45 A;  1GZF A;  4GF1 A;  5D1U A;  4XM8 A;  2WN8 A;  4H0V A;  1J7N A;  1GXZ A;  1GZE A;  5GTT A;  4FML A;  1PWU A;  1OG3 A;  4H0T A;  3U0J A;  1JKY A;  4PKR A;  2J3V A;  5D1T A;  1ZXV A;  2GWL A;  2J3X A;  2C8H A;  4H0X A;  4PKT A;  4XM6 A;  1QS2 A;  2WN6 A;  4XM7 A;  5H04 A;  5DZQ A;  1PWW A;  4FXQ A;  2WN4 A;  1GY0 A;  4ELN A;  2C8C A;  1G24 A;  2J3Z A;  2C8D A;  5D1S A;  2WN5 A;  4WF6 A;  2C8G A;  4XSH B;  2C8B X;  2A9K B;  1OG4 A;  4DV8 A;  2C8A A;  3BW8 A;  4H0Y A;  1OJQ A;  2C8F E;  4GY2 A;  1OJZ A;  4PKS A;  5BWM B;  3BUZ A;  1UZI A;  1PWP A;  4PKW A;  2A78 B;  1R4B A;  2BOV B;  4PKV A;  4PKQ A;  1GXY A;  1GIR A;  1YQY A;  4PKU A;  1GIQ A;  4XSG B; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...