2C8GA

Structure of the pn loop q182a mutant c3bot1 exoenzyme (free state, crystal form i)
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSAFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords MONO-ADP-RIBOSYLTRANSFERASE C3
publication title Structural Properties of Wild-Type and Two Artt Motif Mutants Clostridium Botulinum C3 Exoenzyme Isoform 1 in Different Substrate Complexed States and Crystal Forms.
rcsb
source organism Clostridium botulinum
molecule tags Transferase
total genus 69
structure length 207
sequence length 207
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-12-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2c8gA00
2A78B 5D1TA 4XM7A 4XM8A 5D1SA 1JKYA 2GWLA 1PWQA 2J3VA 5GTTA 4H0VA 2A9KB 2WN7A 5BWMB 1ZXVA 5D1UA 4GY2A 1OJZA 4PKVA 1GXYA 5H03A 1QS1A 1PWPA 2C8BX 4ELNA 2C8EE 1OG1A 1UZIA 1GXZA 4FK7A 2GWMA 1YQYA 4FMLA 4GF1A 3BW8A 1G24A 1R4BA 2J3XA 1PWVA 2C8DA 3BUZA 1OG4A 1J7NA 4XSGB 2C8FE 5DZQA 2WN4A 2C8GA 1PWWA 2BOVB 1GIQA 4PKUA 1R45A 4PKQA 4PKWA 5H04A 4DV8A 4XM6A 3NTSA 1OJQA 4PKTA 1OG3A 2C8HA 2WN6A 4XSHB 4H0TA 1PWUA 4H0XA 1GZFA 3U0JA 4FXQA 4PKSA 1GY0A 4WF6A 2C8AA 2WN5A 1QS2A 2C8CA 1GZEA 4PKRA 2C89A 4H03A 2WN8A 1GIRA 4TR5A 2J3ZA 4H0YA
chains in the Genus database with same CATH superfamily
2A78B 5D1TA 4XM7A 4XM8A 5D1SA 1JKYA 2GWLA 1PWQA 2J3VA 5GTTA 4H0VA 2A9KB 2WN7A 5BWMB 1ZXVA 5D1UA 4GY2A 1OJZA 4PKVA 1GXYA 5H03A 1QS1A 1PWPA 2C8BX 4ELNA 2C8EE 1OG1A 1UZIA 1GXZA 4FK7A 2GWMA 1YQYA 4FMLA 4GF1A 3BW8A 1G24A 1R4BA 2J3XA 1PWVA 2C8DA 3BUZA 1OG4A 1J7NA 4XSGB 2C8FE 5DZQA 2WN4A 2C8GA 1PWWA 2BOVB 1GIQA 4PKUA 1R45A 4PKQA 4PKWA 5H04A 4DV8A 4XM6A 3NTSA 1OJQA 4PKTA 1OG3A 2C8HA 2WN6A 4XSHB 4H0TA 1PWUA 4H0XA 1GZFA 3U0JA 4FXQA 4PKSA 1GY0A 4WF6A 2C8AA 2WN5A 1QS2A 2C8CA 1GZEA 4PKRA 2C89A 4H03A 2WN8A 1GIRA 4TR5A 2J3ZA 4H0YA
chains in the Genus database with same CATH topology
2A78B 5D1TA 4XM7A 4XM8A 5D1SA 1JKYA 2GWLA 1PWQA 2J3VA 5GTTA 4H0VA 2A9KB 2WN7A 5BWMB 1ZXVA 5D1UA 4GY2A 1OJZA 4PKVA 1GXYA 5H03A 1QS1A 1PWPA 2C8BX 4ELNA 2C8EE 1OG1A 1UZIA 1GXZA 4FK7A 2GWMA 1YQYA 4FMLA 4GF1A 3BW8A 1G24A 1R4BA 2J3XA 1PWVA 2C8DA 3BUZA 1OG4A 1J7NA 4XSGB 2C8FE 5DZQA 2WN4A 2C8GA 1PWWA 2BOVB 1GIQA 4PKUA 1R45A 4PKQA 4PKWA 5H04A 4DV8A 4XM6A 3NTSA 1OJQA 4PKTA 1OG3A 2C8HA 2WN6A 4XSHB 4H0TA 1PWUA 4H0XA 1GZFA 3U0JA 4FXQA 4PKSA 1GY0A 4WF6A 2C8AA 2WN5A 1QS2A 2C8CA 1GZEA 4PKRA 2C89A 4H03A 2WN8A 1GIRA 4TR5A 2J3ZA 4H0YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A78 B;  5D1T A;  4XM7 A;  4XM8 A;  5D1S A;  1JKY A;  2GWL A;  1PWQ A;  2J3V A;  5GTT A;  4H0V A;  2A9K B;  2WN7 A;  5BWM B;  1ZXV A;  5D1U A;  4GY2 A;  1OJZ A;  4PKV A;  1GXY A;  5H03 A;  1QS1 A;  1PWP A;  2C8B X;  4ELN A;  2C8E E;  1OG1 A;  1UZI A;  1GXZ A;  4FK7 A;  2GWM A;  1YQY A;  4FML A;  4GF1 A;  3BW8 A;  1G24 A;  1R4B A;  2J3X A;  1PWV A;  2C8D A;  3BUZ A;  1OG4 A;  1J7N A;  4XSG B;  2C8F E;  5DZQ A;  2WN4 A;  2C8G A;  1PWW A;  2BOV B;  1GIQ A;  4PKU A;  1R45 A;  4PKQ A;  4PKW A;  5H04 A;  4DV8 A;  4XM6 A;  3NTS A;  1OJQ A;  4PKT A;  1OG3 A;  2C8H A;  2WN6 A;  4XSH B;  4H0T A;  1PWU A;  4H0X A;  1GZF A;  3U0J A;  4FXQ A;  4PKS A;  1GY0 A;  4WF6 A;  2C8A A;  2WN5 A;  1QS2 A;  2C8C A;  1GZE A;  4PKR A;  2C89 A;  4H03 A;  2WN8 A;  1GIR A;  4TR5 A;  2J3Z A;  4H0Y A; 
#chains in the Genus database with same CATH topology
 2A78 B;  5D1T A;  4XM7 A;  4XM8 A;  5D1S A;  1JKY A;  2GWL A;  1PWQ A;  2J3V A;  5GTT A;  4H0V A;  2A9K B;  2WN7 A;  5BWM B;  1ZXV A;  5D1U A;  4GY2 A;  1OJZ A;  4PKV A;  1GXY A;  5H03 A;  1QS1 A;  1PWP A;  2C8B X;  4ELN A;  2C8E E;  1OG1 A;  1UZI A;  1GXZ A;  4FK7 A;  2GWM A;  1YQY A;  4FML A;  4GF1 A;  3BW8 A;  1G24 A;  1R4B A;  2J3X A;  1PWV A;  2C8D A;  3BUZ A;  1OG4 A;  1J7N A;  4XSG B;  2C8F E;  5DZQ A;  2WN4 A;  2C8G A;  1PWW A;  2BOV B;  1GIQ A;  4PKU A;  1R45 A;  4PKQ A;  4PKW A;  5H04 A;  4DV8 A;  4XM6 A;  3NTS A;  1OJQ A;  4PKT A;  1OG3 A;  2C8H A;  2WN6 A;  4XSH B;  4H0T A;  1PWU A;  4H0X A;  1GZF A;  3U0J A;  4FXQ A;  4PKS A;  1GY0 A;  4WF6 A;  2C8A A;  2WN5 A;  1QS2 A;  2C8C A;  1GZE A;  4PKR A;  2C89 A;  4H03 A;  2WN8 A;  1GIR A;  4TR5 A;  2J3Z A;  4H0Y A; 
#chains in the Genus database with same CATH homology
 2A78 B;  5D1T A;  4XM7 A;  4XM8 A;  5D1S A;  1JKY A;  2GWL A;  1PWQ A;  2J3V A;  5GTT A;  4H0V A;  2A9K B;  2WN7 A;  5BWM B;  1ZXV A;  5D1U A;  4GY2 A;  1OJZ A;  4PKV A;  1GXY A;  5H03 A;  1QS1 A;  1PWP A;  2C8B X;  4ELN A;  2C8E E;  1OG1 A;  1UZI A;  1GXZ A;  4FK7 A;  2GWM A;  1YQY A;  4FML A;  4GF1 A;  3BW8 A;  1G24 A;  1R4B A;  2J3X A;  1PWV A;  2C8D A;  3BUZ A;  1OG4 A;  1J7N A;  4XSG B;  2C8F E;  5DZQ A;  2WN4 A;  2C8G A;  1PWW A;  2BOV B;  1GIQ A;  4PKU A;  1R45 A;  4PKQ A;  4PKW A;  5H04 A;  4DV8 A;  4XM6 A;  3NTS A;  1OJQ A;  4PKT A;  1OG3 A;  2C8H A;  2WN6 A;  4XSH B;  4H0T A;  1PWU A;  4H0X A;  1GZF A;  3U0J A;  4FXQ A;  4PKS A;  1GY0 A;  4WF6 A;  2C8A A;  2WN5 A;  1QS2 A;  2C8C A;  1GZE A;  4PKR A;  2C89 A;  4H03 A;  2WN8 A;  1GIR A;  4TR5 A;  2J3Z A;  4H0Y A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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