2C8GA

Structure of the pn loop q182a mutant c3bot1 exoenzyme (free state, crystal form i)
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSAFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords MONO-ADP-RIBOSYLTRANSFERASE C3
publication title Structural Properties of Wild-Type and Two Artt Motif Mutants Clostridium Botulinum C3 Exoenzyme Isoform 1 in Different Substrate Complexed States and Crystal Forms.
rcsb
source organism Clostridium botulinum
molecule tags Transferase
total genus 69
structure length 207
sequence length 207
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-12-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2c8gA00
5D1SA 4ELNA 1PWWA 1PWPA 4H03A 4H0XA 5D1UA 1PWVA 4PKWA 3BW8A 4PKUA 1OG1A 2C89A 2WN5A 4PKQA 1GXZA 2A9KB 5BWMB 5H04A 4XSHB 1GZFA 4H0TA 2WN6A 4FXQA 1PWUA 1R45A 1J7NA 5GTTA 1QS1A 1GZEA 2BOVB 4XM8A 4FMLA 4H0YA 1GIRA 2GWLA 4PKRA 2C8HA 1PWQA 1YQYA 4PKSA 1JKYA 2J3ZA 2A78B 5H03A 4GY2A 1GIQA 5DZQA 3NTSA 1GY0A 4GF1A 1OJZA 1OJQA 1ZXVA 4PKTA 2C8GA 2C8AA 2J3XA 2J3VA 2WN8A 4H0VA 1QS2A 4XSGB 4PKVA 4WF6A 4FK7A 4XM7A 2C8CA 4TR5A 2WN7A 2C8FE 1G24A 4DV8A 1OG4A 1OG3A 3BUZA 5D1TA 2C8BX 2WN4A 1R4BA 2C8EE 1UZIA 3U0JA 4XM6A 1GXYA 2C8DA 2GWMA
chains in the Genus database with same CATH superfamily
5D1SA 4ELNA 1PWWA 1PWPA 4H03A 4H0XA 5D1UA 1PWVA 4PKWA 3BW8A 4PKUA 1OG1A 2C89A 2WN5A 4PKQA 1GXZA 2A9KB 5BWMB 5H04A 4XSHB 1GZFA 4H0TA 2WN6A 4FXQA 1PWUA 1R45A 1J7NA 5GTTA 1QS1A 1GZEA 2BOVB 4XM8A 4FMLA 4H0YA 1GIRA 2GWLA 4PKRA 2C8HA 1PWQA 1YQYA 4PKSA 1JKYA 2J3ZA 2A78B 5H03A 4GY2A 1GIQA 5DZQA 3NTSA 1GY0A 4GF1A 1OJZA 1OJQA 1ZXVA 4PKTA 2C8GA 2C8AA 2J3XA 2J3VA 2WN8A 4H0VA 1QS2A 4XSGB 4PKVA 4WF6A 4FK7A 4XM7A 2C8CA 4TR5A 2WN7A 2C8FE 1G24A 4DV8A 1OG4A 1OG3A 3BUZA 5D1TA 2C8BX 2WN4A 1R4BA 2C8EE 1UZIA 3U0JA 4XM6A 1GXYA 2C8DA 2GWMA
chains in the Genus database with same CATH topology
5D1SA 4ELNA 1PWWA 1PWPA 4H03A 4H0XA 5D1UA 1PWVA 4PKWA 3BW8A 4PKUA 1OG1A 2C89A 2WN5A 4PKQA 1GXZA 2A9KB 5BWMB 5H04A 4XSHB 1GZFA 4H0TA 2WN6A 4FXQA 1PWUA 1R45A 1J7NA 5GTTA 1QS1A 1GZEA 2BOVB 4XM8A 4FMLA 4H0YA 1GIRA 2GWLA 4PKRA 2C8HA 1PWQA 1YQYA 4PKSA 1JKYA 2J3ZA 2A78B 5H03A 4GY2A 1GIQA 5DZQA 3NTSA 1GY0A 4GF1A 1OJZA 1OJQA 1ZXVA 4PKTA 2C8GA 2C8AA 2J3XA 2J3VA 2WN8A 4H0VA 1QS2A 4XSGB 4PKVA 4WF6A 4FK7A 4XM7A 2C8CA 4TR5A 2WN7A 2C8FE 1G24A 4DV8A 1OG4A 1OG3A 3BUZA 5D1TA 2C8BX 2WN4A 1R4BA 2C8EE 1UZIA 3U0JA 4XM6A 1GXYA 2C8DA 2GWMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D1S A;  4ELN A;  1PWW A;  1PWP A;  4H03 A;  4H0X A;  5D1U A;  1PWV A;  4PKW A;  3BW8 A;  4PKU A;  1OG1 A;  2C89 A;  2WN5 A;  4PKQ A;  1GXZ A;  2A9K B;  5BWM B;  5H04 A;  4XSH B;  1GZF A;  4H0T A;  2WN6 A;  4FXQ A;  1PWU A;  1R45 A;  1J7N A;  5GTT A;  1QS1 A;  1GZE A;  2BOV B;  4XM8 A;  4FML A;  4H0Y A;  1GIR A;  2GWL A;  4PKR A;  2C8H A;  1PWQ A;  1YQY A;  4PKS A;  1JKY A;  2J3Z A;  2A78 B;  5H03 A;  4GY2 A;  1GIQ A;  5DZQ A;  3NTS A;  1GY0 A;  4GF1 A;  1OJZ A;  1OJQ A;  1ZXV A;  4PKT A;  2C8G A;  2C8A A;  2J3X A;  2J3V A;  2WN8 A;  4H0V A;  1QS2 A;  4XSG B;  4PKV A;  4WF6 A;  4FK7 A;  4XM7 A;  2C8C A;  4TR5 A;  2WN7 A;  2C8F E;  1G24 A;  4DV8 A;  1OG4 A;  1OG3 A;  3BUZ A;  5D1T A;  2C8B X;  2WN4 A;  1R4B A;  2C8E E;  1UZI A;  3U0J A;  4XM6 A;  1GXY A;  2C8D A;  2GWM A; 
#chains in the Genus database with same CATH topology
 5D1S A;  4ELN A;  1PWW A;  1PWP A;  4H03 A;  4H0X A;  5D1U A;  1PWV A;  4PKW A;  3BW8 A;  4PKU A;  1OG1 A;  2C89 A;  2WN5 A;  4PKQ A;  1GXZ A;  2A9K B;  5BWM B;  5H04 A;  4XSH B;  1GZF A;  4H0T A;  2WN6 A;  4FXQ A;  1PWU A;  1R45 A;  1J7N A;  5GTT A;  1QS1 A;  1GZE A;  2BOV B;  4XM8 A;  4FML A;  4H0Y A;  1GIR A;  2GWL A;  4PKR A;  2C8H A;  1PWQ A;  1YQY A;  4PKS A;  1JKY A;  2J3Z A;  2A78 B;  5H03 A;  4GY2 A;  1GIQ A;  5DZQ A;  3NTS A;  1GY0 A;  4GF1 A;  1OJZ A;  1OJQ A;  1ZXV A;  4PKT A;  2C8G A;  2C8A A;  2J3X A;  2J3V A;  2WN8 A;  4H0V A;  1QS2 A;  4XSG B;  4PKV A;  4WF6 A;  4FK7 A;  4XM7 A;  2C8C A;  4TR5 A;  2WN7 A;  2C8F E;  1G24 A;  4DV8 A;  1OG4 A;  1OG3 A;  3BUZ A;  5D1T A;  2C8B X;  2WN4 A;  1R4B A;  2C8E E;  1UZI A;  3U0J A;  4XM6 A;  1GXY A;  2C8D A;  2GWM A; 
#chains in the Genus database with same CATH homology
 5D1S A;  4ELN A;  1PWW A;  1PWP A;  4H03 A;  4H0X A;  5D1U A;  1PWV A;  4PKW A;  3BW8 A;  4PKU A;  1OG1 A;  2C89 A;  2WN5 A;  4PKQ A;  1GXZ A;  2A9K B;  5BWM B;  5H04 A;  4XSH B;  1GZF A;  4H0T A;  2WN6 A;  4FXQ A;  1PWU A;  1R45 A;  1J7N A;  5GTT A;  1QS1 A;  1GZE A;  2BOV B;  4XM8 A;  4FML A;  4H0Y A;  1GIR A;  2GWL A;  4PKR A;  2C8H A;  1PWQ A;  1YQY A;  4PKS A;  1JKY A;  2J3Z A;  2A78 B;  5H03 A;  4GY2 A;  1GIQ A;  5DZQ A;  3NTS A;  1GY0 A;  4GF1 A;  1OJZ A;  1OJQ A;  1ZXV A;  4PKT A;  2C8G A;  2C8A A;  2J3X A;  2J3V A;  2WN8 A;  4H0V A;  1QS2 A;  4XSG B;  4PKV A;  4WF6 A;  4FK7 A;  4XM7 A;  2C8C A;  4TR5 A;  2WN7 A;  2C8F E;  1G24 A;  4DV8 A;  1OG4 A;  1OG3 A;  3BUZ A;  5D1T A;  2C8B X;  2WN4 A;  1R4B A;  2C8E E;  1UZI A;  3U0J A;  4XM6 A;  1GXY A;  2C8D A;  2GWM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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