2C8GA

Structure of the pn loop q182a mutant c3bot1 exoenzyme (free state, crystal form i)
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSAFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Properties of Wild-Type and Two Artt Motif Mutants Clostridium Botulinum C3 Exoenzyme Isoform 1 in Different Substrate Complexed States and Crystal Forms.
rcsb
molecule tags Transferase
source organism Clostridium botulinum
molecule keywords MONO-ADP-RIBOSYLTRANSFERASE C3
total genus 69
structure length 207
sequence length 207
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-12-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2c8gA00
5D1UA 2C8HA 2A78B 1OG4A 2J3ZA 1GXYA 4H0TA 5H03A 1OG3A 4WF6A 2C8EE 1UZIA 4PKQA 2BOVB 2J3XA 1GIRA 4PKUA 1GY0A 2J3VA 1OG1A 2GWLA 4XM6A 4XM8A 4DV8A 2A9KB 2C8BX 1GZFA 4XSHB 1GZEA 4FK7A 1GXZA 4XM7A 2WN5A 5GTTA 1JKYA 3BW8A 2C8AA 1QS1A 4XSGB 4PKVA 1OJZA 1G24A 1R45A 2WN7A 5BWMB 5D1TA 2C8CA 2C8DA 3NTSA 4PKRA 2C89A 4PKWA 4H0VA 5H04A 4FXQA 4FMLA 1QS2A 4PKTA 2GWMA 1PWVA 3BUZA 1PWPA 4PKSA 4GY2A 1GIQA 4H03A 2C8GA 4ELNA 2WN6A 4GF1A 1R4BA 1PWQA 4H0YA 1PWUA 4TR5A 5DZQA 1YQYA 1PWWA 1ZXVA 2C8FE 3U0JA 5D1SA 2WN4A 4H0XA 1J7NA 2WN8A 1OJQA
chains in the Genus database with same CATH superfamily
5D1UA 2C8HA 2A78B 1OG4A 2J3ZA 1GXYA 4H0TA 5H03A 1OG3A 4WF6A 2C8EE 1UZIA 4PKQA 2BOVB 2J3XA 1GIRA 4PKUA 1GY0A 2J3VA 1OG1A 2GWLA 4XM6A 4XM8A 4DV8A 2A9KB 2C8BX 1GZFA 4XSHB 1GZEA 4FK7A 1GXZA 4XM7A 2WN5A 5GTTA 1JKYA 3BW8A 2C8AA 1QS1A 4XSGB 4PKVA 1OJZA 1G24A 1R45A 2WN7A 5BWMB 5D1TA 2C8CA 2C8DA 3NTSA 4PKRA 2C89A 4PKWA 4H0VA 5H04A 4FXQA 4FMLA 1QS2A 4PKTA 2GWMA 1PWVA 3BUZA 1PWPA 4PKSA 4GY2A 1GIQA 4H03A 2C8GA 4ELNA 2WN6A 4GF1A 1R4BA 1PWQA 4H0YA 1PWUA 4TR5A 5DZQA 1YQYA 1PWWA 1ZXVA 2C8FE 3U0JA 5D1SA 2WN4A 4H0XA 1J7NA 2WN8A 1OJQA
chains in the Genus database with same CATH topology
5D1UA 2C8HA 2A78B 1OG4A 2J3ZA 1GXYA 4H0TA 5H03A 1OG3A 4WF6A 2C8EE 1UZIA 4PKQA 2BOVB 2J3XA 1GIRA 4PKUA 1GY0A 2J3VA 1OG1A 2GWLA 4XM6A 4XM8A 4DV8A 2A9KB 2C8BX 1GZFA 4XSHB 1GZEA 4FK7A 1GXZA 4XM7A 2WN5A 5GTTA 1JKYA 3BW8A 2C8AA 1QS1A 4XSGB 4PKVA 1OJZA 1G24A 1R45A 2WN7A 5BWMB 5D1TA 2C8CA 2C8DA 3NTSA 4PKRA 2C89A 4PKWA 4H0VA 5H04A 4FXQA 4FMLA 1QS2A 4PKTA 2GWMA 1PWVA 3BUZA 1PWPA 4PKSA 4GY2A 1GIQA 4H03A 2C8GA 4ELNA 2WN6A 4GF1A 1R4BA 1PWQA 4H0YA 1PWUA 4TR5A 5DZQA 1YQYA 1PWWA 1ZXVA 2C8FE 3U0JA 5D1SA 2WN4A 4H0XA 1J7NA 2WN8A 1OJQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D1U A;  2C8H A;  2A78 B;  1OG4 A;  2J3Z A;  1GXY A;  4H0T A;  5H03 A;  1OG3 A;  4WF6 A;  2C8E E;  1UZI A;  4PKQ A;  2BOV B;  2J3X A;  1GIR A;  4PKU A;  1GY0 A;  2J3V A;  1OG1 A;  2GWL A;  4XM6 A;  4XM8 A;  4DV8 A;  2A9K B;  2C8B X;  1GZF A;  4XSH B;  1GZE A;  4FK7 A;  1GXZ A;  4XM7 A;  2WN5 A;  5GTT A;  1JKY A;  3BW8 A;  2C8A A;  1QS1 A;  4XSG B;  4PKV A;  1OJZ A;  1G24 A;  1R45 A;  2WN7 A;  5BWM B;  5D1T A;  2C8C A;  2C8D A;  3NTS A;  4PKR A;  2C89 A;  4PKW A;  4H0V A;  5H04 A;  4FXQ A;  4FML A;  1QS2 A;  4PKT A;  2GWM A;  1PWV A;  3BUZ A;  1PWP A;  4PKS A;  4GY2 A;  1GIQ A;  4H03 A;  2C8G A;  4ELN A;  2WN6 A;  4GF1 A;  1R4B A;  1PWQ A;  4H0Y A;  1PWU A;  4TR5 A;  5DZQ A;  1YQY A;  1PWW A;  1ZXV A;  2C8F E;  3U0J A;  5D1S A;  2WN4 A;  4H0X A;  1J7N A;  2WN8 A;  1OJQ A; 
#chains in the Genus database with same CATH topology
 5D1U A;  2C8H A;  2A78 B;  1OG4 A;  2J3Z A;  1GXY A;  4H0T A;  5H03 A;  1OG3 A;  4WF6 A;  2C8E E;  1UZI A;  4PKQ A;  2BOV B;  2J3X A;  1GIR A;  4PKU A;  1GY0 A;  2J3V A;  1OG1 A;  2GWL A;  4XM6 A;  4XM8 A;  4DV8 A;  2A9K B;  2C8B X;  1GZF A;  4XSH B;  1GZE A;  4FK7 A;  1GXZ A;  4XM7 A;  2WN5 A;  5GTT A;  1JKY A;  3BW8 A;  2C8A A;  1QS1 A;  4XSG B;  4PKV A;  1OJZ A;  1G24 A;  1R45 A;  2WN7 A;  5BWM B;  5D1T A;  2C8C A;  2C8D A;  3NTS A;  4PKR A;  2C89 A;  4PKW A;  4H0V A;  5H04 A;  4FXQ A;  4FML A;  1QS2 A;  4PKT A;  2GWM A;  1PWV A;  3BUZ A;  1PWP A;  4PKS A;  4GY2 A;  1GIQ A;  4H03 A;  2C8G A;  4ELN A;  2WN6 A;  4GF1 A;  1R4B A;  1PWQ A;  4H0Y A;  1PWU A;  4TR5 A;  5DZQ A;  1YQY A;  1PWW A;  1ZXV A;  2C8F E;  3U0J A;  5D1S A;  2WN4 A;  4H0X A;  1J7N A;  2WN8 A;  1OJQ A; 
#chains in the Genus database with same CATH homology
 5D1U A;  2C8H A;  2A78 B;  1OG4 A;  2J3Z A;  1GXY A;  4H0T A;  5H03 A;  1OG3 A;  4WF6 A;  2C8E E;  1UZI A;  4PKQ A;  2BOV B;  2J3X A;  1GIR A;  4PKU A;  1GY0 A;  2J3V A;  1OG1 A;  2GWL A;  4XM6 A;  4XM8 A;  4DV8 A;  2A9K B;  2C8B X;  1GZF A;  4XSH B;  1GZE A;  4FK7 A;  1GXZ A;  4XM7 A;  2WN5 A;  5GTT A;  1JKY A;  3BW8 A;  2C8A A;  1QS1 A;  4XSG B;  4PKV A;  1OJZ A;  1G24 A;  1R45 A;  2WN7 A;  5BWM B;  5D1T A;  2C8C A;  2C8D A;  3NTS A;  4PKR A;  2C89 A;  4PKW A;  4H0V A;  5H04 A;  4FXQ A;  4FML A;  1QS2 A;  4PKT A;  2GWM A;  1PWV A;  3BUZ A;  1PWP A;  4PKS A;  4GY2 A;  1GIQ A;  4H03 A;  2C8G A;  4ELN A;  2WN6 A;  4GF1 A;  1R4B A;  1PWQ A;  4H0Y A;  1PWU A;  4TR5 A;  5DZQ A;  1YQY A;  1PWW A;  1ZXV A;  2C8F E;  3U0J A;  5D1S A;  2WN4 A;  4H0X A;  1J7N A;  2WN8 A;  1OJQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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