2C8GA

Structure of the pn loop q182a mutant c3bot1 exoenzyme (free state, crystal form i)
Total Genus 69
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
69
sequence length
207
structure length
207
Chain Sequence
b'NTYQEFTNIDQAKAWGNAQYKKYGLSKSEKEAIVSYTKSASEINGKLRQNKGVINGFPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNTLLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVSAFAGRPIITKFKVAKGSKAGYIDPISAFAGQLEMLLPRHSTYHIDDMRLSSDGKQIIITATMMGTAINP'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Properties of Wild-Type and Two Artt Motif Mutants Clostridium Botulinum C3 Exoenzyme Isoform 1 in Different Substrate Complexed States and Crystal Forms.
rcsb
molecule keywords MONO-ADP-RIBOSYLTRANSFERASE C3
source organism Clostridium botulinum
molecule tags Transferase
total genus 69
structure length 207
sequence length 207
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.-:
pdb deposition date 2005-12-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03496 ADPrib_exo_Tox ADP-ribosyltransferase exoenzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.176.10 Alpha Beta Alpha-Beta Complex Toxin ADP-ribosyltransferase; Chain A, domain 1 Toxin ADP-ribosyltransferase; Chain A, domain 1 2c8gA00
2A9KB 1OG1A 5BWMB 5H04A 2C8BX 1GXYA 2C8EE 1QS1A 1OG3A 1R4BA 3U0JA 2WN8A 3NTSA 2WN5A 5DZQA 4H0VA 4XM7A 2WN4A 4XM8A 4PKVA 1R45A 1GZEA 2J3ZA 2C8FE 1PWUA 4H0TA 4ELNA 3BUZA 2C8AA 2J3VA 2C8HA 4GF1A 1OG4A 5D1UA 1GY0A 1ZXVA 4H0XA 1PWWA 1PWQA 4H0YA 4PKTA 2J3XA 1PWPA 4FXQA 1GZFA 1GIRA 1YQYA 3BW8A 5GTTA 2C89A 2C8CA 4FMLA 4GY2A 4XM6A 1QS2A 4FK7A 4PKSA 2A78B 2GWLA 4PKUA 4XSHB 2BOVB 1JKYA 4H03A 1J7NA 1GIQA 2WN6A 2C8DA 1OJZA 5D1TA 5H03A 4WF6A 1PWVA 4TR5A 2WN7A 1OJQA 1GXZA 1G24A 4XSGB 4PKWA 2GWMA 1UZIA 4PKRA 5D1SA 4DV8A 4PKQA 2C8GA
chains in the Genus database with same CATH superfamily
2A9KB 1OG1A 5BWMB 5H04A 2C8BX 1GXYA 2C8EE 1QS1A 1OG3A 1R4BA 3U0JA 2WN8A 3NTSA 2WN5A 5DZQA 4H0VA 4XM7A 2WN4A 4XM8A 4PKVA 1R45A 1GZEA 2J3ZA 2C8FE 1PWUA 4H0TA 4ELNA 3BUZA 2C8AA 2J3VA 2C8HA 4GF1A 1OG4A 5D1UA 1GY0A 1ZXVA 4H0XA 1PWWA 1PWQA 4H0YA 4PKTA 2J3XA 1PWPA 4FXQA 1GZFA 1GIRA 1YQYA 3BW8A 5GTTA 2C89A 2C8CA 4FMLA 4GY2A 4XM6A 1QS2A 4FK7A 4PKSA 2A78B 2GWLA 4PKUA 4XSHB 2BOVB 1JKYA 4H03A 1J7NA 1GIQA 2WN6A 2C8DA 1OJZA 5D1TA 5H03A 4WF6A 1PWVA 4TR5A 2WN7A 1OJQA 1GXZA 1G24A 4XSGB 4PKWA 2GWMA 1UZIA 4PKRA 5D1SA 4DV8A 4PKQA 2C8GA
chains in the Genus database with same CATH topology
2A9KB 1OG1A 5BWMB 5H04A 2C8BX 1GXYA 2C8EE 1QS1A 1OG3A 1R4BA 3U0JA 2WN8A 3NTSA 2WN5A 5DZQA 4H0VA 4XM7A 2WN4A 4XM8A 4PKVA 1R45A 1GZEA 2J3ZA 2C8FE 1PWUA 4H0TA 4ELNA 3BUZA 2C8AA 2J3VA 2C8HA 4GF1A 1OG4A 5D1UA 1GY0A 1ZXVA 4H0XA 1PWWA 1PWQA 4H0YA 4PKTA 2J3XA 1PWPA 4FXQA 1GZFA 1GIRA 1YQYA 3BW8A 5GTTA 2C89A 2C8CA 4FMLA 4GY2A 4XM6A 1QS2A 4FK7A 4PKSA 2A78B 2GWLA 4PKUA 4XSHB 2BOVB 1JKYA 4H03A 1J7NA 1GIQA 2WN6A 2C8DA 1OJZA 5D1TA 5H03A 4WF6A 1PWVA 4TR5A 2WN7A 1OJQA 1GXZA 1G24A 4XSGB 4PKWA 2GWMA 1UZIA 4PKRA 5D1SA 4DV8A 4PKQA 2C8GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A9K B;  1OG1 A;  5BWM B;  5H04 A;  2C8B X;  1GXY A;  2C8E E;  1QS1 A;  1OG3 A;  1R4B A;  3U0J A;  2WN8 A;  3NTS A;  2WN5 A;  5DZQ A;  4H0V A;  4XM7 A;  2WN4 A;  4XM8 A;  4PKV A;  1R45 A;  1GZE A;  2J3Z A;  2C8F E;  1PWU A;  4H0T A;  4ELN A;  3BUZ A;  2C8A A;  2J3V A;  2C8H A;  4GF1 A;  1OG4 A;  5D1U A;  1GY0 A;  1ZXV A;  4H0X A;  1PWW A;  1PWQ A;  4H0Y A;  4PKT A;  2J3X A;  1PWP A;  4FXQ A;  1GZF A;  1GIR A;  1YQY A;  3BW8 A;  5GTT A;  2C89 A;  2C8C A;  4FML A;  4GY2 A;  4XM6 A;  1QS2 A;  4FK7 A;  4PKS A;  2A78 B;  2GWL A;  4PKU A;  4XSH B;  2BOV B;  1JKY A;  4H03 A;  1J7N A;  1GIQ A;  2WN6 A;  2C8D A;  1OJZ A;  5D1T A;  5H03 A;  4WF6 A;  1PWV A;  4TR5 A;  2WN7 A;  1OJQ A;  1GXZ A;  1G24 A;  4XSG B;  4PKW A;  2GWM A;  1UZI A;  4PKR A;  5D1S A;  4DV8 A;  4PKQ A;  2C8G A; 
#chains in the Genus database with same CATH topology
 2A9K B;  1OG1 A;  5BWM B;  5H04 A;  2C8B X;  1GXY A;  2C8E E;  1QS1 A;  1OG3 A;  1R4B A;  3U0J A;  2WN8 A;  3NTS A;  2WN5 A;  5DZQ A;  4H0V A;  4XM7 A;  2WN4 A;  4XM8 A;  4PKV A;  1R45 A;  1GZE A;  2J3Z A;  2C8F E;  1PWU A;  4H0T A;  4ELN A;  3BUZ A;  2C8A A;  2J3V A;  2C8H A;  4GF1 A;  1OG4 A;  5D1U A;  1GY0 A;  1ZXV A;  4H0X A;  1PWW A;  1PWQ A;  4H0Y A;  4PKT A;  2J3X A;  1PWP A;  4FXQ A;  1GZF A;  1GIR A;  1YQY A;  3BW8 A;  5GTT A;  2C89 A;  2C8C A;  4FML A;  4GY2 A;  4XM6 A;  1QS2 A;  4FK7 A;  4PKS A;  2A78 B;  2GWL A;  4PKU A;  4XSH B;  2BOV B;  1JKY A;  4H03 A;  1J7N A;  1GIQ A;  2WN6 A;  2C8D A;  1OJZ A;  5D1T A;  5H03 A;  4WF6 A;  1PWV A;  4TR5 A;  2WN7 A;  1OJQ A;  1GXZ A;  1G24 A;  4XSG B;  4PKW A;  2GWM A;  1UZI A;  4PKR A;  5D1S A;  4DV8 A;  4PKQ A;  2C8G A; 
#chains in the Genus database with same CATH homology
 2A9K B;  1OG1 A;  5BWM B;  5H04 A;  2C8B X;  1GXY A;  2C8E E;  1QS1 A;  1OG3 A;  1R4B A;  3U0J A;  2WN8 A;  3NTS A;  2WN5 A;  5DZQ A;  4H0V A;  4XM7 A;  2WN4 A;  4XM8 A;  4PKV A;  1R45 A;  1GZE A;  2J3Z A;  2C8F E;  1PWU A;  4H0T A;  4ELN A;  3BUZ A;  2C8A A;  2J3V A;  2C8H A;  4GF1 A;  1OG4 A;  5D1U A;  1GY0 A;  1ZXV A;  4H0X A;  1PWW A;  1PWQ A;  4H0Y A;  4PKT A;  2J3X A;  1PWP A;  4FXQ A;  1GZF A;  1GIR A;  1YQY A;  3BW8 A;  5GTT A;  2C89 A;  2C8C A;  4FML A;  4GY2 A;  4XM6 A;  1QS2 A;  4FK7 A;  4PKS A;  2A78 B;  2GWL A;  4PKU A;  4XSH B;  2BOV B;  1JKY A;  4H03 A;  1J7N A;  1GIQ A;  2WN6 A;  2C8D A;  1OJZ A;  5D1T A;  5H03 A;  4WF6 A;  1PWV A;  4TR5 A;  2WN7 A;  1OJQ A;  1GXZ A;  1G24 A;  4XSG B;  4PKW A;  2GWM A;  1UZI A;  4PKR A;  5D1S A;  4DV8 A;  4PKQ A;  2C8G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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