2CAHA

Structure of proteus mirabilis pr catalase for the native form (e-fe(iii)) complexed with nadph
Total Genus 142
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
142
sequence length
475
structure length
474
Chain Sequence
KKLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQASKETQQRQIDLFTKVHPEYGAGVEKAIKVL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase (h2o2 acceptor)
molecule keywords CATALASE
publication title Crystal structure of Proteus mirabilis PR catalase with and without bound NADPH.
pubmed doi rcsb
total genus 142
structure length 474
sequence length 475
ec nomenclature ec 1.11.1.6: Catalase.
pdb deposition date 1996-07-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00199 Catalase Catalase
A PF06628 Catalase-rel Catalase-related immune-responsive
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.180.10 Mainly Beta Beta Barrel Catalase HpII, Chain A, domain 1 Catalase core domain 2cahA00
4ENSA 3DY5A 4QOLA 4B7AA 3P9PA 4B5KA 3TTWA 2ISAA 3EJ6A 3PQ3A 4AULA 3TTTA 1E93A 1NM0A 3TTXA 3P9RA 4QONA 4AUEA 4E37A 3ZJ5A 2IQFA 1QWLA 4B40A 4AUNA 4QOQA 4ENVA 1F4JA 3TTVA 3VU3A 1U5UA 2J2MA 1QWSA 1GGFA 1P7YA 4ENWA 1M7SA 1QWMA 1IPHA 1A4EA 4QORA 4ENUA 4AUMA 2XF2A 4ENPA 3ZJ4A 4CABA 4ENRA 1GGHA 1P7ZA 2A9EA 3PQ2A 3PQ4A 2XQ1A 3P9QA 4QOOA 3PQ8A 4ENTA 1CF9A 1H7KA 1P80A 4QOPA 1GWEA 1GWHA 1GGJA 4BIMA 3PQ6A 2IUFA 1GGKA 1M85A 3PQ7A 4QOMA 1MQFA 4AJ9A 1SY7A 4B31A 2CAGA 1QF7A 1GWFA 4B2YA 1H6NA 1HBZA 3HB6A 4BFLA 3PQ5A 1SI8A 5BV2P 3P9SA 3TTUA 4ENQA 2CAHA 1GGEA 1P81A 1GG9A
chains in the Genus database with same CATH superfamily
4ENSA 3DY5A 8CATA 4QOLA 4B7HA 3P9PA 3E4YA 4B5KA 4B7AA 3TTWA 2ISAA 3EJ6A 3PQ3A 4AULA 3TTTA 1E93A 1NM0A 3TTXA 3P9RA 4QONA 4AUEA 4E37A 3ZJ5A 2IQFA 1DGGA 1QWLA 1TH2A 4AUNA 4QOQA 4B40A 1F4JA 4ENVA 3TTVA 3VU3A 1U5UA 2J2MA 1QWSA 1TH3A 1GGFA 1P7YA 4ENWA 1M7SA 1QWMA 1IPHA 3J7BA 1DGFA 1A4EA 4QORA 4ENUA 4AUMA 2XF2A 4ENPA 3ZJ4A 4CABA 4ENRA 1GGHA 1P7ZA 2A9EA 3NWLA 4B7GA 3PQ2A 3PQ4A 2XQ1A 3P9QA 4QOOA 3PQ8A 4BLCA 4ENTA 1DGHA 1CF9A 1H7KA 1P80A 3E4WA 3RE8A 4QOPA 1GWEA 1GWHA 3RGPA 1GGJA 4BIMA 3PQ6A 2IUFA 1GGKA 1M85A 3PQ7A 4QOMA 1MQFA 4AJ9A 1SY7A 4B31A 2CAGA 5GKNA 1DGBA 1QF7A 7CATA 1GWFA 4B2YA 1H6NA 1HBZA 3HB6A 4BFLA 1TGUA 3PQ5A 1SI8A 5BV2P 3P9SA 1DGHB 3TTUA 4ENQA 2CAHA 3RGSA 1GGEA 1QQWA 4B7FA 1P81A 1TH4A 1GG9A
chains in the Genus database with same CATH topology
4ENSA 3DY5A 4QOLA 4B7AA 3P9PA 4B5KA 3TTWA 2ISAA 3EJ6A 3PQ3A 4AULA 3TTTA 1E93A 1NM0A 3TTXA 3P9RA 4QONA 4AUEA 4E37A 3ZJ5A 2IQFA 1QWLA 4B40A 4AUNA 4QOQA 4ENVA 1F4JA 3TTVA 3VU3A 1U5UA 2J2MA 1QWSA 1GGFA 1P7YA 4ENWA 1M7SA 1QWMA 1IPHA 1A4EA 4QORA 4ENUA 4AUMA 2XF2A 4ENPA 3ZJ4A 4CABA 4ENRA 1GGHA 1P7ZA 2A9EA 3PQ2A 3PQ4A 2XQ1A 3P9QA 4QOOA 3PQ8A 4ENTA 1CF9A 1H7KA 1P80A 4QOPA 1GWEA 1GWHA 1GGJA 4BIMA 3PQ6A 2IUFA 1GGKA 1M85A 3PQ7A 4QOMA 1MQFA 4AJ9A 1SY7A 4B31A 2CAGA 1QF7A 1GWFA 4B2YA 1H6NA 1HBZA 3HB6A 4BFLA 3PQ5A 1SI8A 5BV2P 3P9SA 3TTUA 4ENQA 2CAHA 1GGEA 1P81A 1GG9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ENS A;  3DY5 A;  4QOL A;  4B7A A;  3P9P A;  4B5K A;  3TTW A;  2ISA A;  3EJ6 A;  3PQ3 A;  4AUL A;  3TTT A;  1E93 A;  1NM0 A;  3TTX A;  3P9R A;  4QON A;  4AUE A;  4E37 A;  3ZJ5 A;  2IQF A;  1QWL A;  4B40 A;  4AUN A;  4QOQ A;  4ENV A;  1F4J A;  3TTV A;  3VU3 A;  1U5U A;  2J2M A;  1QWS A;  1GGF A;  1P7Y A;  4ENW A;  1M7S A;  1QWM A;  1IPH A;  1A4E A;  4QOR A;  4ENU A;  4AUM A;  2XF2 A;  4ENP A;  3ZJ4 A;  4CAB A;  4ENR A;  1GGH A;  1P7Z A;  2A9E A;  3PQ2 A;  3PQ4 A;  2XQ1 A;  3P9Q A;  4QOO A;  3PQ8 A;  4ENT A;  1CF9 A;  1H7K A;  1P80 A;  4QOP A;  1GWE A;  1GWH A;  1GGJ A;  4BIM A;  3PQ6 A;  2IUF A;  1GGK A;  1M85 A;  3PQ7 A;  4QOM A;  1MQF A;  4AJ9 A;  1SY7 A;  4B31 A;  2CAG A;  1QF7 A;  1GWF A;  4B2Y A;  1H6N A;  1HBZ A;  3HB6 A;  4BFL A;  3PQ5 A;  1SI8 A;  5BV2 P;  3P9S A;  3TTU A;  4ENQ A;  2CAH A;  1GGE A;  1P81 A;  1GG9 A; 
#chains in the Genus database with same CATH topology
 4ENS A;  3DY5 A;  8CAT A;  4QOL A;  4B7H A;  3P9P A;  3E4Y A;  4B5K A;  4B7A A;  3TTW A;  2ISA A;  3EJ6 A;  3PQ3 A;  4AUL A;  3TTT A;  1E93 A;  1NM0 A;  3TTX A;  3P9R A;  4QON A;  4AUE A;  4E37 A;  3ZJ5 A;  2IQF A;  1DGG A;  1QWL A;  1TH2 A;  4AUN A;  4QOQ A;  4B40 A;  1F4J A;  4ENV A;  3TTV A;  3VU3 A;  1U5U A;  2J2M A;  1QWS A;  1TH3 A;  1GGF A;  1P7Y A;  4ENW A;  1M7S A;  1QWM A;  1IPH A;  3J7B A;  1DGF A;  1A4E A;  4QOR A;  4ENU A;  4AUM A;  2XF2 A;  4ENP A;  3ZJ4 A;  4CAB A;  4ENR A;  1GGH A;  1P7Z A;  2A9E A;  3NWL A;  4B7G A;  3PQ2 A;  3PQ4 A;  2XQ1 A;  3P9Q A;  4QOO A;  3PQ8 A;  4BLC A;  4ENT A;  1DGH A;  1CF9 A;  1H7K A;  1P80 A;  3E4W A;  3RE8 A;  4QOP A;  1GWE A;  1GWH A;  3RGP A;  1GGJ A;  4BIM A;  3PQ6 A;  2IUF A;  1GGK A;  1M85 A;  3PQ7 A;  4QOM A;  1MQF A;  4AJ9 A;  1SY7 A;  4B31 A;  2CAG A;  5GKN A;  1DGB A;  1QF7 A;  7CAT A;  1GWF A;  4B2Y A;  1H6N A;  1HBZ A;  3HB6 A;  4BFL A;  1TGU A;  3PQ5 A;  1SI8 A;  5BV2 P;  3P9S A;  1DGH B;  3TTU A;  4ENQ A;  2CAH A;  3RGS A;  1GGE A;  1QQW A;  4B7F A;  1P81 A;  1TH4 A;  1GG9 A; 
#chains in the Genus database with same CATH homology
 4ENS A;  3DY5 A;  4QOL A;  4B7A A;  3P9P A;  4B5K A;  3TTW A;  2ISA A;  3EJ6 A;  3PQ3 A;  4AUL A;  3TTT A;  1E93 A;  1NM0 A;  3TTX A;  3P9R A;  4QON A;  4AUE A;  4E37 A;  3ZJ5 A;  2IQF A;  1QWL A;  4B40 A;  4AUN A;  4QOQ A;  4ENV A;  1F4J A;  3TTV A;  3VU3 A;  1U5U A;  2J2M A;  1QWS A;  1GGF A;  1P7Y A;  4ENW A;  1M7S A;  1QWM A;  1IPH A;  1A4E A;  4QOR A;  4ENU A;  4AUM A;  2XF2 A;  4ENP A;  3ZJ4 A;  4CAB A;  4ENR A;  1GGH A;  1P7Z A;  2A9E A;  3PQ2 A;  3PQ4 A;  2XQ1 A;  3P9Q A;  4QOO A;  3PQ8 A;  4ENT A;  1CF9 A;  1H7K A;  1P80 A;  4QOP A;  1GWE A;  1GWH A;  1GGJ A;  4BIM A;  3PQ6 A;  2IUF A;  1GGK A;  1M85 A;  3PQ7 A;  4QOM A;  1MQF A;  4AJ9 A;  1SY7 A;  4B31 A;  2CAG A;  1QF7 A;  1GWF A;  4B2Y A;  1H6N A;  1HBZ A;  3HB6 A;  4BFL A;  3PQ5 A;  1SI8 A;  5BV2 P;  3P9S A;  3TTU A;  4ENQ A;  2CAH A;  1GGE A;  1P81 A;  1GG9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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