2CSCA

Structure of ternary complexes of citrate synthase with d-and l-malate: mechanistic implications
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
433
structure length
429
Chain Sequence
ASSTNLKDVLAALIPKEQARIKTFRQQHGGTALGQITVDMSYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKGGGGEPLPEGLFWLLVTGQIPTGAQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGILRTKYWEMVYESAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLGWLAQLQKAAGADASLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPGDPMFKLVAQLYKIVPNVLLEQGAAANPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTDGLIAL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lyase
molecule keywords CITRATE SYNTHASE
publication title 1.9-A structures of ternary complexes of citrate synthase with D- and L-malate: mechanistic implications.
pubmed doi rcsb
source organism Gallus gallus
total genus 149
structure length 429
sequence length 433
ec nomenclature ec 2.3.3.1: Citrate (Si)-synthase.
pdb deposition date 1990-05-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00285 Citrate_synt Citrate synthase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.230.10 Mainly Alpha Orthogonal Bundle Cytochrome p450-Terp; domain 2 Cytochrome P450-Terp, domain 2 2cscA02
1.10.580.10 Mainly Alpha Orthogonal Bundle Citrate Synthase; domain 1 Citrate Synthase, domain 1 2cscA01
1CSSA 5CSCB 1OWCA 4TVMA 1CTSA 4JADA 1A59A 2IFCA 4JAGA 1NXEA 4CSCA 2C6XA 4E6YA 1AMZA 1CSIA 4JAEA 1CSCA 3CSCA 1IXEA 2R26A 3ENJA 2CTSA 4CTSA 1CSHA 1IOMA 1VGMA 2R9EA 2P2WA 3HWKA 5CSCA 4JAFA 6CTSA 4YBOA 6CSCA 4XGHA 1VGPA 4G6BA 1OWBA 1CSRA 5CTSA 2IBPA 1AL6A 3MSUA 3TQGA 1O7XA 2H12A 3O8JA 1NXGA 1AJ8A 2CSCA
chains in the Genus database with same CATH superfamily
1CSSA 5CSCB 1OWCA 4TVMA 1CTSA 4JADA 1A59A 2IFCA 4JAGA 1NXEA 4CSCA 2C6XA 4E6YA 1AMZA 1CSIA 4JAEA 1CSCA 3CSCA 1IXEA 2R26A 3ENJA 2CTSA 4CTSA 1CSHA 1IOMA 1VGMA 2R9EA 2P2WA 3HWKA 4XGHA 4JAFA 5CSCA 4YBOA 6CTSA 6CSCA 1VGPA 4G6BA 1OWBA 1CSRA 5CTSA 2IBPA 1AL6A 3MSUA 3TQGA 1O7XA 2H12A 3O8JA 1NXGA 1AJ8A 2CSCA
chains in the Genus database with same CATH topology
1CSSA 5CSCB 1OWCA 4TVMA 1CTSA 4JADA 1A59A 2IFCA 4JAGA 1NXEA 4CSCA 2C6XA 4E6YA 1AMZA 1CSIA 4JAEA 1CSCA 3CSCA 1IXEA 2R26A 3ENJA 2CTSA 4CTSA 1CSHA 1IOMA 1VGMA 2R9EA 2P2WA 3HWKA 5CSCA 4JAFA 6CTSA 4YBOA 6CSCA 4XGHA 1VGPA 4G6BA 1OWBA 1CSRA 5CTSA 2IBPA 1AL6A 3MSUA 3TQGA 1O7XA 2H12A 3O8JA 1NXGA 1AJ8A 2CSCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CSS A;  5CSC B;  1OWC A;  4TVM A;  1CTS A;  4JAD A;  1A59 A;  2IFC A;  4JAG A;  1NXE A;  4CSC A;  2C6X A;  4E6Y A;  1AMZ A;  1CSI A;  4JAE A;  1CSC A;  3CSC A;  1IXE A;  2R26 A;  3ENJ A;  2CTS A;  4CTS A;  1CSH A;  1IOM A;  1VGM A;  2R9E A;  2P2W A;  3HWK A;  5CSC A;  4JAF A;  6CTS A;  4YBO A;  6CSC A;  4XGH A;  1VGP A;  4G6B A;  1OWB A;  1CSR A;  5CTS A;  2IBP A;  1AL6 A;  3MSU A;  3TQG A;  1O7X A;  2H12 A;  3O8J A;  1NXG A;  1AJ8 A;  2CSC A; 
#chains in the Genus database with same CATH topology
 1CSS A;  5CSC B;  1OWC A;  4TVM A;  1CTS A;  4JAD A;  1A59 A;  2IFC A;  4JAG A;  1NXE A;  4CSC A;  2C6X A;  4E6Y A;  1AMZ A;  1CSI A;  4JAE A;  1CSC A;  3CSC A;  1IXE A;  2R26 A;  3ENJ A;  2CTS A;  4CTS A;  1CSH A;  1IOM A;  1VGM A;  2R9E A;  2P2W A;  3HWK A;  4XGH A;  4JAF A;  5CSC A;  4YBO A;  6CTS A;  6CSC A;  1VGP A;  4G6B A;  1OWB A;  1CSR A;  5CTS A;  2IBP A;  1AL6 A;  3MSU A;  3TQG A;  1O7X A;  2H12 A;  3O8J A;  1NXG A;  1AJ8 A;  2CSC A; 
#chains in the Genus database with same CATH homology
 1CSS A;  5CSC B;  1OWC A;  4TVM A;  1CTS A;  4JAD A;  1A59 A;  2IFC A;  4JAG A;  1NXE A;  4CSC A;  2C6X A;  4E6Y A;  1AMZ A;  1CSI A;  4JAE A;  1CSC A;  3CSC A;  1IXE A;  2R26 A;  3ENJ A;  2CTS A;  4CTS A;  1CSH A;  1IOM A;  1VGM A;  2R9E A;  2P2W A;  3HWK A;  5CSC A;  4JAF A;  6CTS A;  4YBO A;  6CSC A;  4XGH A;  1VGP A;  4G6B A;  1OWB A;  1CSR A;  5CTS A;  2IBP A;  1AL6 A;  3MSU A;  3TQG A;  1O7X A;  2H12 A;  3O8J A;  1NXG A;  1AJ8 A;  2CSC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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