2DB6A

Solution structure of rsgi ruh-051, a c1 domain of stac3 from human cdna
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
74
structure length
74
Chain Sequence
GSSGSSGEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords SH3 and cysteine rich domain 3
publication title Solution structure of RSGI RUH-051, a C1 domain of STAC3 from human cDNA
rcsb
source organism Homo sapiens
total genus 9
structure length 74
sequence length 74
ec nomenclature
pdb deposition date 2005-12-15
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.20 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2db6A01
1PTRA 5FUXA 4UXHA 3KY9A 1TBNA 1R79A 2FNFX 2ORWA 2ENZA 2QQEA 2YUUA 3CXLA 2B8TA 2UZ3A 3UEJA 3UEYA 2JA1A 4L9MA 2WVJA 1FAQA 1KBFA 5FUVA 2GVIA 4UXJA 1XBTA 1XA6A 2DB6A 5FUYA 2E73A 3E2IA 1PTQA 2J9RA 1XX6A 3UGDA 2ROWA 2ORVA 2J87A 1TBOA 3UGLA 2ELIA 4FKDA 2QQ0A 1Y8FA 2VRWB 2ENNA 1W4RA 1FARA 1RFHA 3BJIA 4UXIA 5FUWA 2QPOA 3UGIA 1KBEA 4B6DA 3UFFA
chains in the Genus database with same CATH superfamily
1P9ZA 1PTRA 5FUXA 2F3CI 3TOBA 2W0TA 3KY9A 2QQEA 5JHWC 5CCMA 1DS3I 3R5DA 1Y1BA 1MT1A 2NU4I 2JA1A 1YTPA 3SEKC 3UEYA 2SGDI 1SGQI 3TO9A 2XRCA 1FY7A 2GVIA 1MJ9A 2OD1A 2WGCA 1WKXA 3TO6A 2CWFA 1CT2I 2X52A 3SGBI 1HPTA 1AN1I 2KCXA 1ULNA 2ORVA 3UOEA 3GOXA 1PCEA 2YQPA 4FKDA 1Y8FA 2NU3I 2ENNA 1RFHA 1MJAA 2A20A 2KMRA 2LEOA 2B0UC 3BJIA 4UXIA 5EX3A 2LB7A 3VE5A 2N1AB 2QQCA 3R5BA 2V53A 3FSXA 1TBRR 1K7TA 1TOTA 4B6DA 2ARPF 4AMLA 4UXHA 2JW6A 1SGNI 2ORWA 2KMPA 2ODDA 2X3TA 3PDNA 3E59A 3CXLA 4OVOA 2NU2I 5CCLA 2B8TA 2UZ3A 2ERWA 1OVOA 1MJBA 1Q9BA 1KBFA 2KMOA 3HH2C 1CHOI 1TIHA 7WGAA 4E1RA 1X4SA 4A24A 5J8CA 1OMUA 5FUYA 2DIPA 1V1IA 3E2IA 1PTQA 2J9RA 1CT4I 2ROWA 2LUYA 1NUBA 1SGRI 2SGEI 3UGLA 1K7UA 5J8FA 4MPIA 1IW4A 1SGYI 1M8BA 1UVGA 2N71A 1Z2IA 1N13A 5E3QA 4E1PA 5HQ8A 1ULKA 4DNCA 3QWPA 2FNFX 1X74A 1YU6C 3OXGA 1WTJA 2YUUA 3OXLA 3UEJA 1Y1CA 2WVJA 3VDUA 1FAQA 4HGUA 5FUVA 1SGPI 1IY6A 2CWHA 1BUSA 3RU0A 1H0ZA 2SGPI 1XBTA 2OZUA 2E73A 2OU2A 1PJUA 2RC4A 2V1CA 3FSYA 3D00A 2GKRI 3SGQI 4WP4A 2GKVA 2WCYA 2J87A 3B4VC 5DAEA 1KMAA 1TBOA 1SGDI 1W3SA 2SGQI 4GI3C 2QQ0A 2DKVA 1W4RA 2M5XA 2OVOA 2P6AC 2VRWB 1TUSA 3OVOA 1WGCA 2QPOA 3QAHA 5FUWA 1IY5A 1LR9A 1HEVA 1M8CA 1WGTA 2JXDA 2JYYA 1VDDA 1BMOA 2KMQA 1OMTA 1KBEA 1HJAI 1TGSI 5E3RA 2QQDA 1LR7A 1TBNA 1R79A 2NU0I 2ENZA 1CE3A 3TJQA 3OXFA 1K7VA 3TOAA 1CSOI 2SGFI 4L9MA 1V1HA 1LR8A 2L8EA 1CGJI 1UVFA 2CJSC 2GKTI 1S20A 2JZMA 3R5AA 1TBQR 1XA6A 2DB6A 4SGBI 4UXJA 9WGAA 1FYBA 1CGII 3FC3A 2V1CC 2E5RA 1TURA 2N17A 2PQ8A 1XX6A 5HI7A 3UGDA 3TO7A 2GIVA 2BUSA 2CWGA 2RIJA 3OL0A 1U5KA 2K9HA 5E3PA 2Y0MA 1Z7KB 1R0RI 1SGEI 1NXUA 1UHAA 2ELIA 2L7XA 3QTLD 4JCVE 1FARA 1CT0I 1DS2I 1P9GA 3MEKA 1HDLA 1OYVI 3VDPA 1PPFI 2NU1I 2UVOA 1ULMA 5EX0A 3UGIA 3R5CA 2N52A 1UUCA 3UFFA
chains in the Genus database with same CATH topology
1PTRA 5FUXA 2F3CI 2W0TA 3KY9A 2QQEA 5JHWC 5CCMA 1DS3I 1Y1BA 1MT1A 2NU4I 2JA1A 1YTPA 3SEKC 3UEYA 2SGDI 1SGQI 2XRCA 2GVIA 2OD1A 3SGBI 1CT2I 1HPTA 1AN1I 2KCXA 2ORVA 3GOXA 1PCEA 2YQPA 4FKDA 1Y8FA 2NU3I 2ENNA 1RFHA 2A20A 2KMRA 2LEOA 3BJIA 2B0UC 4UXIA 5EX3A 3VE5A 2N1AB 2QQCA 2V53A 1TBRR 1TOTA 4B6DA 2ARPF 4UXHA 2JW6A 1SGNI 2ORWA 2KMPA 2ODDA 4OVOA 3PDNA 3E59A 3CXLA 5CCLA 2NU2I 2B8TA 2UZ3A 2ERWA 1OVOA 1KBFA 2KMOA 3HH2C 1CHOI 1TIHA 4E1RA 1X4SA 4A24A 1OMUA 5FUYA 2DIPA 1V1IA 3E2IA 1PTQA 2J9RA 1CT4I 2ROWA 2LUYA 1NUBA 1SGRI 2SGEI 3UGLA 1IW4A 1SGYI 1M8BA 1UVGA 2N71A 1N13A 4E1PA 5HQ8A 3QWPA 2FNFX 1X74A 1YU6C 3OXGA 2YUUA 3OXLA 3UEJA 1Y1CA 2WVJA 3VDUA 1FAQA 4HGUA 5FUVA 1SGPI 1IY6A 1BUSA 1H0ZA 3RU0A 2SGPI 1XBTA 2E73A 2V1CA 1PJUA 3D00A 2GKRI 3SGQI 2GKVA 2WCYA 2J87A 3B4VC 5DAEA 1KMAA 1TBOA 1SGDI 1W3SA 2SGQI 4GI3C 2QQ0A 2M5XA 1W4RA 2OVOA 2P6AC 2VRWB 5FUWA 1TUSA 3OVOA 2QPOA 1IY5A 1LR9A 1M8CA 2JXDA 2JYYA 1VDDA 1BMOA 2KMQA 1OMTA 1KBEA 1TGSI 1HJAI 2QQDA 1LR7A 1TBNA 1R79A 2NU0I 2ENZA 1CE3A 3TJQA 3OXFA 1CSOI 2SGFI 4L9MA 1V1HA 1LR8A 2L8EA 1CGJI 1UVFA 2CJSC 2GKTI 2JZMA 4SGBI 4UXJA 1TBQR 1XA6A 2DB6A 1FYBA 1CGII 2V1CC 2E5RA 1TURA 2N17A 5HI7A 1XX6A 3UGDA 2BUSA 3OL0A 1U5KA 2K9HA 1Z7KB 1R0RI 1SGEI 2ELIA 2L7XA 3QTLD 4JCVE 1FARA 1CT0I 1DS2I 3MEKA 1HDLA 1OYVI 3VDPA 1PPFI 2NU1I 3UGIA 5EX0A 3FC3A 2N52A 1UUCA 3UFFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1PTR A;  5FUX A;  4UXH A;  3KY9 A;  1TBN A;  1R79 A;  2FNF X;  2ORW A;  2ENZ A;  2QQE A;  2YUU A;  3CXL A;  2B8T A;  2UZ3 A;  3UEJ A;  3UEY A;  2JA1 A;  4L9M A;  2WVJ A;  1FAQ A;  1KBF A;  5FUV A;  2GVI A;  4UXJ A;  1XBT A;  1XA6 A;  2DB6 A;  5FUY A;  2E73 A;  3E2I A;  1PTQ A;  2J9R A;  1XX6 A;  3UGD A;  2ROW A;  2ORV A;  2J87 A;  1TBO A;  3UGL A;  2ELI A;  4FKD A;  2QQ0 A;  1Y8F A;  2VRW B;  2ENN A;  1W4R A;  1FAR A;  1RFH A;  3BJI A;  4UXI A;  5FUW A;  2QPO A;  3UGI A;  1KBE A;  4B6D A;  3UFF A; 
#chains in the Genus database with same CATH topology
 1P9Z A;  1PTR A;  5FUX A;  2F3C I;  3TOB A;  2W0T A;  3KY9 A;  2QQE A;  5JHW C;  5CCM A;  1DS3 I;  3R5D A;  1Y1B A;  1MT1 A;  2NU4 I;  2JA1 A;  1YTP A;  3SEK C;  3UEY A;  2SGD I;  1SGQ I;  3TO9 A;  2XRC A;  1FY7 A;  2GVI A;  1MJ9 A;  2OD1 A;  2WGC A;  1WKX A;  3TO6 A;  2CWF A;  1CT2 I;  2X52 A;  3SGB I;  1HPT A;  1AN1 I;  2KCX A;  1ULN A;  2ORV A;  3UOE A;  3GOX A;  1PCE A;  2YQP A;  4FKD A;  1Y8F A;  2NU3 I;  2ENN A;  1RFH A;  1MJA A;  2A20 A;  2KMR A;  2LEO A;  2B0U C;  3BJI A;  4UXI A;  5EX3 A;  2LB7 A;  3VE5 A;  2N1A B;  2QQC A;  3R5B A;  2V53 A;  3FSX A;  1TBR R;  1K7T A;  1TOT A;  4B6D A;  2ARP F;  4AML A;  4UXH A;  2JW6 A;  1SGN I;  2ORW A;  2KMP A;  2ODD A;  2X3T A;  3PDN A;  3E59 A;  3CXL A;  4OVO A;  2NU2 I;  5CCL A;  2B8T A;  2UZ3 A;  2ERW A;  1OVO A;  1MJB A;  1Q9B A;  1KBF A;  2KMO A;  3HH2 C;  1CHO I;  1TIH A;  7WGA A;  4E1R A;  1X4S A;  4A24 A;  5J8C A;  1OMU A;  5FUY A;  2DIP A;  1V1I A;  3E2I A;  1PTQ A;  2J9R A;  1CT4 I;  2ROW A;  2LUY A;  1NUB A;  1SGR I;  2SGE I;  3UGL A;  1K7U A;  5J8F A;  4MPI A;  1IW4 A;  1SGY I;  1M8B A;  1UVG A;  2N71 A;  1Z2I A;  1N13 A;  5E3Q A;  4E1P A;  5HQ8 A;  1ULK A;  4DNC A;  3QWP A;  2FNF X;  1X74 A;  1YU6 C;  3OXG A;  1WTJ A;  2YUU A;  3OXL A;  3UEJ A;  1Y1C A;  2WVJ A;  3VDU A;  1FAQ A;  4HGU A;  5FUV A;  1SGP I;  1IY6 A;  2CWH A;  1BUS A;  3RU0 A;  1H0Z A;  2SGP I;  1XBT A;  2OZU A;  2E73 A;  2OU2 A;  1PJU A;  2RC4 A;  2V1C A;  3FSY A;  3D00 A;  2GKR I;  3SGQ I;  4WP4 A;  2GKV A;  2WCY A;  2J87 A;  3B4V C;  5DAE A;  1KMA A;  1TBO A;  1SGD I;  1W3S A;  2SGQ I;  4GI3 C;  2QQ0 A;  2DKV A;  1W4R A;  2M5X A;  2OVO A;  2P6A C;  2VRW B;  1TUS A;  3OVO A;  1WGC A;  2QPO A;  3QAH A;  5FUW A;  1IY5 A;  1LR9 A;  1HEV A;  1M8C A;  1WGT A;  2JXD A;  2JYY A;  1VDD A;  1BMO A;  2KMQ A;  1OMT A;  1KBE A;  1HJA I;  1TGS I;  5E3R A;  2QQD A;  1LR7 A;  1TBN A;  1R79 A;  2NU0 I;  2ENZ A;  1CE3 A;  3TJQ A;  3OXF A;  1K7V A;  3TOA A;  1CSO I;  2SGF I;  4L9M A;  1V1H A;  1LR8 A;  2L8E A;  1CGJ I;  1UVF A;  2CJS C;  2GKT I;  1S20 A;  2JZM A;  3R5A A;  1TBQ R;  1XA6 A;  2DB6 A;  4SGB I;  4UXJ A;  9WGA A;  1FYB A;  1CGI I;  3FC3 A;  2V1C C;  2E5R A;  1TUR A;  2N17 A;  2PQ8 A;  1XX6 A;  5HI7 A;  3UGD A;  3TO7 A;  2GIV A;  2BUS A;  2CWG A;  2RIJ A;  3OL0 A;  1U5K A;  2K9H A;  5E3P A;  2Y0M A;  1Z7K B;  1R0R I;  1SGE I;  1NXU A;  1UHA A;  2ELI A;  2L7X A;  3QTL D;  4JCV E;  1FAR A;  1CT0 I;  1DS2 I;  1P9G A;  3MEK A;  1HDL A;  1OYV I;  3VDP A;  1PPF I;  2NU1 I;  2UVO A;  1ULM A;  5EX0 A;  3UGI A;  3R5C A;  2N52 A;  1UUC A;  3UFF A; 
#chains in the Genus database with same CATH homology
 1PTR A;  5FUX A;  2F3C I;  2W0T A;  3KY9 A;  2QQE A;  5JHW C;  5CCM A;  1DS3 I;  1Y1B A;  1MT1 A;  2NU4 I;  2JA1 A;  1YTP A;  3SEK C;  3UEY A;  2SGD I;  1SGQ I;  2XRC A;  2GVI A;  2OD1 A;  3SGB I;  1CT2 I;  1HPT A;  1AN1 I;  2KCX A;  2ORV A;  3GOX A;  1PCE A;  2YQP A;  4FKD A;  1Y8F A;  2NU3 I;  2ENN A;  1RFH A;  2A20 A;  2KMR A;  2LEO A;  3BJI A;  2B0U C;  4UXI A;  5EX3 A;  3VE5 A;  2N1A B;  2QQC A;  2V53 A;  1TBR R;  1TOT A;  4B6D A;  2ARP F;  4UXH A;  2JW6 A;  1SGN I;  2ORW A;  2KMP A;  2ODD A;  4OVO A;  3PDN A;  3E59 A;  3CXL A;  5CCL A;  2NU2 I;  2B8T A;  2UZ3 A;  2ERW A;  1OVO A;  1KBF A;  2KMO A;  3HH2 C;  1CHO I;  1TIH A;  4E1R A;  1X4S A;  4A24 A;  1OMU A;  5FUY A;  2DIP A;  1V1I A;  3E2I A;  1PTQ A;  2J9R A;  1CT4 I;  2ROW A;  2LUY A;  1NUB A;  1SGR I;  2SGE I;  3UGL A;  1IW4 A;  1SGY I;  1M8B A;  1UVG A;  2N71 A;  1N13 A;  4E1P A;  5HQ8 A;  3QWP A;  2FNF X;  1X74 A;  1YU6 C;  3OXG A;  2YUU A;  3OXL A;  3UEJ A;  1Y1C A;  2WVJ A;  3VDU A;  1FAQ A;  4HGU A;  5FUV A;  1SGP I;  1IY6 A;  1BUS A;  1H0Z A;  3RU0 A;  2SGP I;  1XBT A;  2E73 A;  2V1C A;  1PJU A;  3D00 A;  2GKR I;  3SGQ I;  2GKV A;  2WCY A;  2J87 A;  3B4V C;  5DAE A;  1KMA A;  1TBO A;  1SGD I;  1W3S A;  2SGQ I;  4GI3 C;  2QQ0 A;  2M5X A;  1W4R A;  2OVO A;  2P6A C;  2VRW B;  5FUW A;  1TUS A;  3OVO A;  2QPO A;  1IY5 A;  1LR9 A;  1M8C A;  2JXD A;  2JYY A;  1VDD A;  1BMO A;  2KMQ A;  1OMT A;  1KBE A;  1TGS I;  1HJA I;  2QQD A;  1LR7 A;  1TBN A;  1R79 A;  2NU0 I;  2ENZ A;  1CE3 A;  3TJQ A;  3OXF A;  1CSO I;  2SGF I;  4L9M A;  1V1H A;  1LR8 A;  2L8E A;  1CGJ I;  1UVF A;  2CJS C;  2GKT I;  2JZM A;  4SGB I;  4UXJ A;  1TBQ R;  1XA6 A;  2DB6 A;  1FYB A;  1CGI I;  2V1C C;  2E5R A;  1TUR A;  2N17 A;  5HI7 A;  1XX6 A;  3UGD A;  2BUS A;  3OL0 A;  1U5K A;  2K9H A;  1Z7K B;  1R0R I;  1SGE I;  2ELI A;  2L7X A;  3QTL D;  4JCV E;  1FAR A;  1CT0 I;  1DS2 I;  3MEK A;  1HDL A;  1OYV I;  3VDP A;  1PPF I;  2NU1 I;  3UGI A;  5EX0 A;  3FC3 A;  2N52 A;  1UUC A;  3UFF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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