2DBHA

Solution structure of the carboxyl-terminal card-like domain in human tnfr-related death receptor-6
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
102
structure length
102
Chain Sequence
GSSGSSGSSALSRNGSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHFLNPEELRVIEEIPQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLLSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
molecule keywords Tumor necrosis factor receptor superfamily member 21
publication title Solution structure of the carboxyl-terminal CARD-like domain in human TNFR-related death receptor-6
rcsb
source organism Homo sapiens
total genus 20
structure length 102
sequence length 102
ec nomenclature
pdb deposition date 2005-12-15
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 2dbhA01
2KN6A 1Z6TA 1A1WA 4A2QA 1N3KA 4DWNA 4F42A 4P4HI 4ZBWA 2G7RA 3EZQB 3MOPG 1CY5A 2F1SA 2OF5A 2MS7A 3KATA 4IZ7B 4O6XA 4N1LA 4F44A 1DGNA 2MB9A 2GF5A 2YU0A 4E9MA 4UZ0A 2NAQA 2HM2Q 3CRDA 1D2ZA 2N97A 2LWEA 2P1HA 4IZAB 2YQFA 4P4HA 2DBHA 1PN5A 2BBRA 1UCPA 3YGSC 4LWDA 2N80A 2NZ7A 2VGQA 3QF2A 3J6JA 2B1WA 4M9XA 4NQKA 1D2ZB 1WMGA 2M5VA 4I16A 2DBGA 2NSNA 1C15A 4RHWA 2MS8A 1NGRA 4O7QA 2YVIA 2BBZA 3J63A 1CWWA 4A2WA 4M9SA 1E3YA 4JUPA 2DO9A 2YGSA 1DDFA 2KM6A 2A5YB 4RHWE 4JQWA 4EWIA 2LS7A 2D96A 2OF5H 4O9LA 2DBDA 3CL3A 2O71A 4N1KA 2N83A 3YGSP 1E41A 3LQQA 2L6AA 3T6PA 1WH4A 3LQRA 2N7ZA 3MOPA 2N00A 2DBFA 2IB1A 1A1ZA 3MOPK 1FADA 2MN4A 4O9FA 4IZ5E 3EZQA 4D8OA 2N1FA 4QOBA 4N1JA 4FH0A 2MPCA 4M9ZA 1YGOA 2A9IA 2LWDA 2L9MA 1WXPA 1ICHA
chains in the Genus database with same CATH superfamily
2KN6A 1Z6TA 1A1WA 4A2QA 1N3KA 4DWNA 4F42A 4P4HI 4ZBWA 2G7RA 3EZQB 3MOPG 1CY5A 2F1SA 2MJMA 2OF5A 2MS7A 3KATA 4IZ7B 4O6XA 4N1LA 4F44A 1DGNA 2MB9A 2GF5A 2YU0A 4E9MA 4UZ0A 2NAQA 2HM2Q 3CRDA 1D2ZA 2N97A 2LWEA 2P1HA 4IZAB 2YQFA 4P4HA 2DBHA 1PN5A 2BBRA 1UCPA 3YGSC 4LWDA 2N80A 2NZ7A 2VGQA 3QF2A 3J6JA 2B1WA 4M9XA 4NQKA 1D2ZB 1WMGA 2M5VA 4I16A 2DBGA 2NSNA 1C15A 4RHWA 2MS8A 1NGRA 4O7QA 2YVIA 2BBZA 3J63A 1CWWA 4A2WA 4M9SA 1E3YA 4JUPA 2DO9A 2YGSA 1DDFA 2KM6A 2A5YB 4RHWE 4JQWA 4EWIA 2LS7A 2D96A 2OF5H 4O9LA 2DBDA 3CL3A 2O71A 4N1KA 2N83A 3YGSP 1E41A 3LQQA 2L6AA 3T6PA 1WH4A 3LQRA 2N7ZA 3MOPA 2N00A 2DBFA 2IB1A 1A1ZA 3MOPK 1FADA 2MN4A 4O9FA 4IZ5E 3EZQA 4D8OA 2XV9A 2N1FA 4QOBA 4N1JA 4FH0A 2MPCA 4M9ZA 1YGOA 2A9IA 2LWDA 2L9MA 1WXPA 1ICHA
chains in the Genus database with same CATH topology
2KN6A 1Z6TA 1A1WA 4A2QA 1N3KA 4DWNA 4F42A 4P4HI 4ZBWA 2G7RA 3EZQB 3MOPG 1CY5A 2F1SA 2MJMA 2OF5A 2MS7A 3KATA 4IZ7B 4O6XA 4N1LA 4F44A 1DGNA 2MB9A 2GF5A 2YU0A 4E9MA 4UZ0A 2NAQA 2HM2Q 3CRDA 1D2ZA 2N97A 2LWEA 2P1HA 4IZAB 2YQFA 4P4HA 2DBHA 1PN5A 2BBRA 1UCPA 3YGSC 4LWDA 2N80A 2NZ7A 2VGQA 3QF2A 3J6JA 2B1WA 4M9XA 4NQKA 1D2ZB 1WMGA 2M5VA 4I16A 2DBGA 2NSNA 1C15A 4RHWA 2MS8A 1NGRA 4O7QA 2YVIA 2BBZA 3J63A 1CWWA 4A2WA 4M9SA 1E3YA 4JUPA 2DO9A 2YGSA 1DDFA 2KM6A 2A5YB 4RHWE 4JQWA 4EWIA 2LS7A 2D96A 2OF5H 4O9LA 2DBDA 3CL3A 2O71A 4N1KA 2N83A 3YGSP 1E41A 3LQQA 2L6AA 3T6PA 1WH4A 3LQRA 2N7ZA 3MOPA 2N00A 2DBFA 2IB1A 1A1ZA 3MOPK 1FADA 2MN4A 4O9FA 4IZ5E 3EZQA 4D8OA 2XV9A 2N1FA 4QOBA 4N1JA 4FH0A 2MPCA 4M9ZA 1YGOA 2A9IA 2LWDA 2L9MA 1WXPA 1ICHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KN6 A;  1Z6T A;  1A1W A;  4A2Q A;  1N3K A;  4DWN A;  4F42 A;  4P4H I;  4ZBW A;  2G7R A;  3EZQ B;  3MOP G;  1CY5 A;  2F1S A;  2OF5 A;  2MS7 A;  3KAT A;  4IZ7 B;  4O6X A;  4N1L A;  4F44 A;  1DGN A;  2MB9 A;  2GF5 A;  2YU0 A;  4E9M A;  4UZ0 A;  2NAQ A;  2HM2 Q;  3CRD A;  1D2Z A;  2N97 A;  2LWE A;  2P1H A;  4IZA B;  2YQF A;  4P4H A;  2DBH A;  1PN5 A;  2BBR A;  1UCP A;  3YGS C;  4LWD A;  2N80 A;  2NZ7 A;  2VGQ A;  3QF2 A;  3J6J A;  2B1W A;  4M9X A;  4NQK A;  1D2Z B;  1WMG A;  2M5V A;  4I16 A;  2DBG A;  2NSN A;  1C15 A;  4RHW A;  2MS8 A;  1NGR A;  4O7Q A;  2YVI A;  2BBZ A;  3J63 A;  1CWW A;  4A2W A;  4M9S A;  1E3Y A;  4JUP A;  2DO9 A;  2YGS A;  1DDF A;  2KM6 A;  2A5Y B;  4RHW E;  4JQW A;  4EWI A;  2LS7 A;  2D96 A;  2OF5 H;  4O9L A;  2DBD A;  3CL3 A;  2O71 A;  4N1K A;  2N83 A;  3YGS P;  1E41 A;  3LQQ A;  2L6A A;  3T6P A;  1WH4 A;  3LQR A;  2N7Z A;  3MOP A;  2N00 A;  2DBF A;  2IB1 A;  1A1Z A;  3MOP K;  1FAD A;  2MN4 A;  4O9F A;  4IZ5 E;  3EZQ A;  4D8O A;  2N1F A;  4QOB A;  4N1J A;  4FH0 A;  2MPC A;  4M9Z A;  1YGO A;  2A9I A;  2LWD A;  2L9M A;  1WXP A;  1ICH A; 
#chains in the Genus database with same CATH topology
 2KN6 A;  1Z6T A;  1A1W A;  4A2Q A;  1N3K A;  4DWN A;  4F42 A;  4P4H I;  4ZBW A;  2G7R A;  3EZQ B;  3MOP G;  1CY5 A;  2F1S A;  2MJM A;  2OF5 A;  2MS7 A;  3KAT A;  4IZ7 B;  4O6X A;  4N1L A;  4F44 A;  1DGN A;  2MB9 A;  2GF5 A;  2YU0 A;  4E9M A;  4UZ0 A;  2NAQ A;  2HM2 Q;  3CRD A;  1D2Z A;  2N97 A;  2LWE A;  2P1H A;  4IZA B;  2YQF A;  4P4H A;  2DBH A;  1PN5 A;  2BBR A;  1UCP A;  3YGS C;  4LWD A;  2N80 A;  2NZ7 A;  2VGQ A;  3QF2 A;  3J6J A;  2B1W A;  4M9X A;  4NQK A;  1D2Z B;  1WMG A;  2M5V A;  4I16 A;  2DBG A;  2NSN A;  1C15 A;  4RHW A;  2MS8 A;  1NGR A;  4O7Q A;  2YVI A;  2BBZ A;  3J63 A;  1CWW A;  4A2W A;  4M9S A;  1E3Y A;  4JUP A;  2DO9 A;  2YGS A;  1DDF A;  2KM6 A;  2A5Y B;  4RHW E;  4JQW A;  4EWI A;  2LS7 A;  2D96 A;  2OF5 H;  4O9L A;  2DBD A;  3CL3 A;  2O71 A;  4N1K A;  2N83 A;  3YGS P;  1E41 A;  3LQQ A;  2L6A A;  3T6P A;  1WH4 A;  3LQR A;  2N7Z A;  3MOP A;  2N00 A;  2DBF A;  2IB1 A;  1A1Z A;  3MOP K;  1FAD A;  2MN4 A;  4O9F A;  4IZ5 E;  3EZQ A;  4D8O A;  2XV9 A;  2N1F A;  4QOB A;  4N1J A;  4FH0 A;  2MPC A;  4M9Z A;  1YGO A;  2A9I A;  2LWD A;  2L9M A;  1WXP A;  1ICH A; 
#chains in the Genus database with same CATH homology
 2KN6 A;  1Z6T A;  1A1W A;  4A2Q A;  1N3K A;  4DWN A;  4F42 A;  4P4H I;  4ZBW A;  2G7R A;  3EZQ B;  3MOP G;  1CY5 A;  2F1S A;  2MJM A;  2OF5 A;  2MS7 A;  3KAT A;  4IZ7 B;  4O6X A;  4N1L A;  4F44 A;  1DGN A;  2MB9 A;  2GF5 A;  2YU0 A;  4E9M A;  4UZ0 A;  2NAQ A;  2HM2 Q;  3CRD A;  1D2Z A;  2N97 A;  2LWE A;  2P1H A;  4IZA B;  2YQF A;  4P4H A;  2DBH A;  1PN5 A;  2BBR A;  1UCP A;  3YGS C;  4LWD A;  2N80 A;  2NZ7 A;  2VGQ A;  3QF2 A;  3J6J A;  2B1W A;  4M9X A;  4NQK A;  1D2Z B;  1WMG A;  2M5V A;  4I16 A;  2DBG A;  2NSN A;  1C15 A;  4RHW A;  2MS8 A;  1NGR A;  4O7Q A;  2YVI A;  2BBZ A;  3J63 A;  1CWW A;  4A2W A;  4M9S A;  1E3Y A;  4JUP A;  2DO9 A;  2YGS A;  1DDF A;  2KM6 A;  2A5Y B;  4RHW E;  4JQW A;  4EWI A;  2LS7 A;  2D96 A;  2OF5 H;  4O9L A;  2DBD A;  3CL3 A;  2O71 A;  4N1K A;  2N83 A;  3YGS P;  1E41 A;  3LQQ A;  2L6A A;  3T6P A;  1WH4 A;  3LQR A;  2N7Z A;  3MOP A;  2N00 A;  2DBF A;  2IB1 A;  1A1Z A;  3MOP K;  1FAD A;  2MN4 A;  4O9F A;  4IZ5 E;  3EZQ A;  4D8O A;  2XV9 A;  2N1F A;  4QOB A;  4N1J A;  4FH0 A;  2MPC A;  4M9Z A;  1YGO A;  2A9I A;  2LWD A;  2L9M A;  1WXP A;  1ICH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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