2DD4B

Thiocyanate hydrolase (scnase) from thiobacillus thioparus recombinant apo-enzyme
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
152
structure length
152
Chain Sequence
SSIREEVHRHLGTVALMQPALHQQTHAPAPTEITHTLFRAYTRVPHDVGGEADVPIEYHEKEEEIWELNTFATCECLAWRGVWTAEERRRKQNCDVGQTVYLGMPYYGRWLLTAARILVDKQFVTLTELHNKIVEMRERVASGQGLGEYLPP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Thiocyanate hydrolase alpha subunit
publication title Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center.
pubmed doi rcsb
source organism Thiobacillus thioparus
total genus 47
structure length 152
sequence length 152
chains with identical sequence E, H, K
ec nomenclature ec 3.5.5.8: Thiocyanate hydrolase.
pdb deposition date 2006-01-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF02211 NHase_beta Nitrile hydratase beta subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.472.20 Mainly Alpha Orthogonal Bundle Cyclin A; domain 1 Cyclin A; domain 1 2dd4B00
2CZ0B 2DD4B 3X24B 2CZ1B 3QZ5B 3X28B 2DXCB 3QYGB 3A8HB 3HHTB 1UGQB 2ZZDB 3X20B 2D0QB 3A8LB 3WVEB 2CZ6B 4ZGJB 1AHJB 3QXEB 2ZPFB 2CZ7B 3A8MB 2ZPBB 2AHJB 4OB0B 1UGSB 2CYZB 3VYGB 2DXBB 3X26B 2DD5B 1V29B 1IREB 2ZPEB 3QZ9B 4ZGDB 3WVDB 3A8GB 4OB3B 2ZCFB 3X25B 4FM4B 4ZGEB 3VYHB 3A8OB 4OB2B 3QYHB 4OB1B 1UGRB 2ZPGB 2DPPB 2QDYB 2ZPHB 1UGPB 2ZPIB
chains in the Genus database with same CATH superfamily
1W98B 1PKDB 4F6WB 1AISB 4EOJB 4RODA 3EOCB 1QMZB 4CRLB 4G6LB 4HL4A 3BLHB 4EOLB 1E9HB 2BS3A 3QZ9B 4EORB 3WVDB 4MFEA 4LOCA 3A8GB 4YC3B 1FKMA 1JSUB 3A8LB 2IW9B 4CFNB 5LQFB 2UZBB 2ZPBB 2I53A 1UGSB 5LMKB 3HB9A 1V29B 3DDPB 1IREB 2EUFA 3QWLA 2CCHB 3VYHB 4AI6A 2UZDB 2WPAB 3X24B 4BCIB 2IN3A 3TW6A 5IF1B 2IW6B 1UGQB 3X20B 2D0QB 3BHUB 4ROCA 2C6TB 4F7NB 1VYWB 5HBHB 2DXBB 4AKHA 2W9FA 4BCQD 1D3UB 2BS2A 3HO8A 4IMYB 3QYEA 1N4MA 4YOSA 2WMBB 4YOOA 2CZ1B 5HBJB 2UZLB 3MY1B 4BCOB 4CFXB 2CZ6B 1ZP2A 2C5OB 2UUEB 2ZPFB 1OIYB 3TN8B 1UNLD 1AD6A 1GY3B 4OGRB 2KMGA 2IW8B 2PK9B 5IHYA 4EC9B 4NSTB 3X25B 3A8OB 1H1QB 1JSTB 3EJ1B 1P5EB 2ZPIB 4BCKB 1OL2B 2UZEB 1F5QB 1G3NC 2DMEA 4JX5A 4BCFB 2DD5B 2PMIB 3BG5A 1FVVB 2QDYB 3DTOA 2WHBB 3MY5B 3A8HB 1GH6B 3WVEB 5HVYB 1O9KA 1VINA 1GUXA 3NDQA 4FM4B 4ELLA 2WJ9A 1UGPB 3QZ5B 1H26B 3X28B 1H1RB 3DL1A 2WFYB 3DOGB 5L2WB 4EOSB 3A8MB 2R7GA 2AHJB 3TNHB 4CFMB 5DQVA 3X26B 3QHWB 3QHRB 4F6UB 4HLQA 4II5B 2PHGA 3HZJA 2ZPGB 1TFBA 2WIHB 3BG3A 4UN0A 3MIAB 1FINB 3DJBA 2F2CA 3VKGA 4KRCB 5EFQB 2CZ7B 4BBRM 4ROEA 1OKVB 5FGKB 2CCIB 4EOKB 4QSHA 4BCMD 4HNVA 1UNHD 3PO3S 4OB1B 3GTMS 4BY1X 5IDPB 4F7JB 4BBSM 2G9XB 5IDNB 2CJMB 3BLQB 4BCMB 2BPMB 1UGRB 1JOWA 3MI9B 5HQ0B 2W99A 4F6SB 2W96A 4ZGJB 2G77A 3QYBA 2W9ZA 1ENWA 2CYZB 3TNIB 1KXUA 4AKGA 4CFUB 4EOPB 2WIPB 5CEIB 2B9RA 4EOQB 3HBLA 5EJCA 2C5VB 2WEVB 4BCNB 4EONB 3K7AM 1E7PA 2WMAB 2BKZB 3BG9A 3QXEB 2QDJA 1OIUB 1H4LD 4EOIB 4I3ZB 1BU2A 1URCB 4ELJA 3TNWB 1OI9B 1H28B 4BCHB 4ZGDB 1H25B 4BCPB 3QYHB 1C9BA 4JX4A 3O0GD 2IVXA 4HNUA 3QYGB 4Z6YA 2ZZDB 5HBEB 3KHIA 2QGSA 1AHJB 3LQ5B 4NC6A 4EOOB 4OB0B 4EC8B 1OKWB 2BS4A 4OB3B 4OR5B 2ZCFB 4BCGB 1VOLA 1O9KB 4F70B 2DPPB 1GUXB 4CXAB 4TTHA 4BY7X 3F5XB 1QLBA 2C4GB 3HHTB 1JKWA 4KRDB 2C5XB 5ICPB 4FX3B 4AKIA 5BNJB 2V22B 3M03A 2PJQA 2JGZB 4YOZA 4HNTA 1H1SB 5I5ZB 2QFZA 1TD6A 4MFDA 4Y72B 4CFVB 1OL1B 4CFWB 4CFUD 4M6VA 1H27B 2KR6A 1UNGD 4ZGEB 1XO2A 3TW7A 3BHTB 2ZPHB 4OB2B 3VKHA 2CZ0B 4BCND 2W2HA 3BHVB 4F7SB 2C5NB 3VYGB 1H1PB 3B57A 2QQ8A 4BCQB 5ACBA 1H24B 5CYIB 2WXVB 2LW4A 2I40B 4BXXX 2DD4B 3DDQB 5HNBB 2DXCB 3RGFB 4F7LB 3BLRB 4MIMA 4JX6A 2X1NB 3H4CA 1OGUB 2ZPEB 3EIDB 4EOMB 3POMA 5DQWA 4BCJB 2PK2A 2QF7A 3G33B
chains in the Genus database with same CATH topology
1QLBA 3HHTB 4JX5A 4BBSM 2DD5B 4HL4A 2BS3A 3QZ9B 4AKIA 3WVDB 4MFEA 1UGRB 4LOCA 3BG5A 3A8GB 2QDYB 1FKMA 4HNTA 3A8HB 3A8LB 3WVEB 2QFZA 4ZGJB 2G77A 3QYBA 2ZPBB 4MFDA 1UGSB 2CYZB 3HB9A 4AKGA 1V29B 1IREB 4M6VA 2KR6A 3QWLA 4FM4B 4ZGEB 3VYHB 4AI6A 3HBLA 3TW7A 2WJ9A 5EJCA 2ZPHB 1UGPB 4OB2B 3X24B 3VKHA 2CZ0B 3QZ5B 3TW6A 3X28B 1UGQB 1E7PA 3DL1A 2D0QB 3X20B 3BG9A 3QXEB 2QDJA 3A8MB 2AHJB 3VYGB 2DXBB 3X26B 4AKHA 4ELJA 2QQ8A 4ZGDB 2BS2A 4HLQA 3HO8A 3HZJA 3QYEA 3QYHB 2ZPGB 4JX4A 3BG3A 2DD4B 2CZ1B 4HNUA 2DXCB 3QYGB 4Z6YA 2ZZDB 3VKGA 2CZ6B 3KHIA 1AHJB 2ZPFB 2CZ7B 4NC6A 4OB0B 4BBRM 4MIMA 4JX6A 3H4CA 2KMGA 2ZPEB 2BS4A 4QSHA 4HNVA 4OB3B 2ZCFB 3X25B 3A8OB 4OB1B 2DPPB 2QF7A 2ZPIB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CZ0 B;  2DD4 B;  3X24 B;  2CZ1 B;  3QZ5 B;  3X28 B;  2DXC B;  3QYG B;  3A8H B;  3HHT B;  1UGQ B;  2ZZD B;  3X20 B;  2D0Q B;  3A8L B;  3WVE B;  2CZ6 B;  4ZGJ B;  1AHJ B;  3QXE B;  2ZPF B;  2CZ7 B;  3A8M B;  2ZPB B;  2AHJ B;  4OB0 B;  1UGS B;  2CYZ B;  3VYG B;  2DXB B;  3X26 B;  2DD5 B;  1V29 B;  1IRE B;  2ZPE B;  3QZ9 B;  4ZGD B;  3WVD B;  3A8G B;  4OB3 B;  2ZCF B;  3X25 B;  4FM4 B;  4ZGE B;  3VYH B;  3A8O B;  4OB2 B;  3QYH B;  4OB1 B;  1UGR B;  2ZPG B;  2DPP B;  2QDY B;  2ZPH B;  1UGP B;  2ZPI B; 
#chains in the Genus database with same CATH topology
 1W98 B;  1PKD B;  4F6W B;  1AIS B;  4EOJ B;  4ROD A;  3EOC B;  1QMZ B;  4CRL B;  4G6L B;  4HL4 A;  3BLH B;  4EOL B;  1E9H B;  2BS3 A;  3QZ9 B;  4EOR B;  3WVD B;  4MFE A;  4LOC A;  3A8G B;  4YC3 B;  1FKM A;  1JSU B;  3A8L B;  2IW9 B;  4CFN B;  5LQF B;  2UZB B;  2ZPB B;  2I53 A;  1UGS B;  5LMK B;  3HB9 A;  1V29 B;  3DDP B;  1IRE B;  2EUF A;  3QWL A;  2CCH B;  3VYH B;  4AI6 A;  2UZD B;  2WPA B;  3X24 B;  4BCI B;  2IN3 A;  3TW6 A;  5IF1 B;  2IW6 B;  1UGQ B;  3X20 B;  2D0Q B;  3BHU B;  4ROC A;  2C6T B;  4F7N B;  1VYW B;  5HBH B;  2DXB B;  4AKH A;  2W9F A;  4BCQ D;  1D3U B;  2BS2 A;  3HO8 A;  4IMY B;  3QYE A;  1N4M A;  4YOS A;  2WMB B;  4YOO A;  2CZ1 B;  5HBJ B;  2UZL B;  3MY1 B;  4BCO B;  4CFX B;  2CZ6 B;  1ZP2 A;  2C5O B;  2UUE B;  2ZPF B;  1OIY B;  3TN8 B;  1UNL D;  1AD6 A;  1GY3 B;  4OGR B;  2KMG A;  2IW8 B;  2PK9 B;  5IHY A;  4EC9 B;  4NST B;  3X25 B;  3A8O B;  1H1Q B;  1JST B;  3EJ1 B;  1P5E B;  2ZPI B;  4BCK B;  1OL2 B;  2UZE B;  1F5Q B;  1G3N C;  2DME A;  4JX5 A;  4BCF B;  2DD5 B;  2PMI B;  3BG5 A;  1FVV B;  2QDY B;  3DTO A;  2WHB B;  3MY5 B;  3A8H B;  1GH6 B;  3WVE B;  5HVY B;  1O9K A;  1VIN A;  1GUX A;  3NDQ A;  4FM4 B;  4ELL A;  2WJ9 A;  1UGP B;  3QZ5 B;  1H26 B;  3X28 B;  1H1R B;  3DL1 A;  2WFY B;  3DOG B;  5L2W B;  4EOS B;  3A8M B;  2R7G A;  2AHJ B;  3TNH B;  4CFM B;  5DQV A;  3X26 B;  3QHW B;  3QHR B;  4F6U B;  4HLQ A;  4II5 B;  2PHG A;  3HZJ A;  2ZPG B;  1TFB A;  2WIH B;  3BG3 A;  4UN0 A;  3MIA B;  1FIN B;  3DJB A;  2F2C A;  3VKG A;  4KRC B;  5EFQ B;  2CZ7 B;  4BBR M;  4ROE A;  1OKV B;  5FGK B;  2CCI B;  4EOK B;  4QSH A;  4BCM D;  4HNV A;  1UNH D;  3PO3 S;  4OB1 B;  3GTM S;  4BY1 X;  5IDP B;  4F7J B;  4BBS M;  2G9X B;  5IDN B;  2CJM B;  3BLQ B;  4BCM B;  2BPM B;  1UGR B;  1JOW A;  3MI9 B;  5HQ0 B;  2W99 A;  4F6S B;  2W96 A;  4ZGJ B;  2G77 A;  3QYB A;  2W9Z A;  1ENW A;  2CYZ B;  3TNI B;  1KXU A;  4AKG A;  4CFU B;  4EOP B;  2WIP B;  5CEI B;  2B9R A;  4EOQ B;  3HBL A;  5EJC A;  2C5V B;  2WEV B;  4BCN B;  4EON B;  3K7A M;  1E7P A;  2WMA B;  2BKZ B;  3BG9 A;  3QXE B;  2QDJ A;  1OIU B;  1H4L D;  4EOI B;  4I3Z B;  1BU2 A;  1URC B;  4ELJ A;  3TNW B;  1OI9 B;  1H28 B;  4BCH B;  4ZGD B;  1H25 B;  4BCP B;  3QYH B;  1C9B A;  4JX4 A;  3O0G D;  2IVX A;  4HNU A;  3QYG B;  4Z6Y A;  2ZZD B;  5HBE B;  3KHI A;  2QGS A;  1AHJ B;  3LQ5 B;  4NC6 A;  4EOO B;  4OB0 B;  4EC8 B;  1OKW B;  2BS4 A;  4OB3 B;  4OR5 B;  2ZCF B;  4BCG B;  1VOL A;  1O9K B;  4F70 B;  2DPP B;  1GUX B;  4CXA B;  4TTH A;  4BY7 X;  3F5X B;  1QLB A;  2C4G B;  3HHT B;  1JKW A;  4KRD B;  2C5X B;  5ICP B;  4FX3 B;  4AKI A;  5BNJ B;  2V22 B;  3M03 A;  2PJQ A;  2JGZ B;  4YOZ A;  4HNT A;  1H1S B;  5I5Z B;  2QFZ A;  1TD6 A;  4MFD A;  4Y72 B;  4CFV B;  1OL1 B;  4CFW B;  4CFU D;  4M6V A;  1H27 B;  2KR6 A;  1UNG D;  4ZGE B;  1XO2 A;  3TW7 A;  3BHT B;  2ZPH B;  4OB2 B;  3VKH A;  2CZ0 B;  4BCN D;  2W2H A;  3BHV B;  4F7S B;  2C5N B;  3VYG B;  1H1P B;  3B57 A;  2QQ8 A;  4BCQ B;  5ACB A;  1H24 B;  5CYI B;  2WXV B;  2LW4 A;  2I40 B;  4BXX X;  2DD4 B;  3DDQ B;  5HNB B;  2DXC B;  3RGF B;  4F7L B;  3BLR B;  4MIM A;  4JX6 A;  2X1N B;  3H4C A;  1OGU B;  2ZPE B;  3EID B;  4EOM B;  3POM A;  5DQW A;  4BCJ B;  2PK2 A;  2QF7 A;  3G33 B; 
#chains in the Genus database with same CATH homology
 1QLB A;  3HHT B;  4JX5 A;  4BBS M;  2DD5 B;  4HL4 A;  2BS3 A;  3QZ9 B;  4AKI A;  3WVD B;  4MFE A;  1UGR B;  4LOC A;  3BG5 A;  3A8G B;  2QDY B;  1FKM A;  4HNT A;  3A8H B;  3A8L B;  3WVE B;  2QFZ A;  4ZGJ B;  2G77 A;  3QYB A;  2ZPB B;  4MFD A;  1UGS B;  2CYZ B;  3HB9 A;  4AKG A;  1V29 B;  1IRE B;  4M6V A;  2KR6 A;  3QWL A;  4FM4 B;  4ZGE B;  3VYH B;  4AI6 A;  3HBL A;  3TW7 A;  2WJ9 A;  5EJC A;  2ZPH B;  1UGP B;  4OB2 B;  3X24 B;  3VKH A;  2CZ0 B;  3QZ5 B;  3TW6 A;  3X28 B;  1UGQ B;  1E7P A;  3DL1 A;  2D0Q B;  3X20 B;  3BG9 A;  3QXE B;  2QDJ A;  3A8M B;  2AHJ B;  3VYG B;  2DXB B;  3X26 B;  4AKH A;  4ELJ A;  2QQ8 A;  4ZGD B;  2BS2 A;  4HLQ A;  3HO8 A;  3HZJ A;  3QYE A;  3QYH B;  2ZPG B;  4JX4 A;  3BG3 A;  2DD4 B;  2CZ1 B;  4HNU A;  2DXC B;  3QYG B;  4Z6Y A;  2ZZD B;  3VKG A;  2CZ6 B;  3KHI A;  1AHJ B;  2ZPF B;  2CZ7 B;  4NC6 A;  4OB0 B;  4BBR M;  4MIM A;  4JX6 A;  3H4C A;  2KMG A;  2ZPE B;  2BS4 A;  4QSH A;  4HNV A;  4OB3 B;  2ZCF B;  3X25 B;  3A8O B;  4OB1 B;  2DPP B;  2QF7 A;  2ZPI B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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