2DD4B

Thiocyanate hydrolase (scnase) from thiobacillus thioparus recombinant apo-enzyme
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
152
structure length
152
Chain Sequence
b'SSIREEVHRHLGTVALMQPALHQQTHAPAPTEITHTLFRAYTRVPHDVGGEADVPIEYHEKEEEIWELNTFATCECLAWRGVWTAEERRRKQNCDVGQTVYLGMPYYGRWLLTAARILVDKQFVTLTELHNKIVEMRERVASGQGLGEYLPP'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Thiocyanate hydrolase alpha subunit
publication title Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center.
pubmed doi rcsb
source organism Thiobacillus thioparus
molecule tags Hydrolase
total genus 47
structure length 152
sequence length 152
chains with identical sequence E, H, K
ec nomenclature ec 3.5.5.8: Thiocyanate hydrolase.
pdb deposition date 2006-01-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF02211 NHase_beta Nitrile hydratase beta subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.472.20 Mainly Alpha Orthogonal Bundle Cyclin A; domain 1 Cyclin A; domain 1 2dd4B00
3QYHB 3VYGB 3VYHB 3X26B 4ZGJB 2ZPGB 3WVEB 1UGPB 2ZPHB 3X28B 2CZ0B 2CYZB 2DXBB 3X24B 1UGRB 4OB3B 1IREB 3A8LB 3QYGB 4ZGDB 1UGQB 3A8GB 4FM4B 3X25B 1AHJB 2DD5B 3A8MB 2ZPBB 4OB2B 2CZ1B 4OB1B 3A8HB 1V29B 2ZCFB 3X20B 2D0QB 2DPPB 3WVDB 2AHJB 2ZPEB 2ZPIB 3QZ9B 2QDYB 4ZGEB 3A8OB 2CZ6B 3QXEB 4OB0B 3QZ5B 2ZZDB 2DXCB 3HHTB 2CZ7B 2ZPFB 2DD4B 1UGSB
chains in the Genus database with same CATH superfamily
4MIMA 5FGKB 4BCKB 3TNWB 3HZJA 4HNTA 5IHYA 4Y72B 4CFMB 4ELJA 1JSUB 1OGUB 3G33B 1OL2B 1OI9B 4EOPB 5EFQB 5ICPB 4ROEA 4F6WB 3MY1B 2C5VB 3QYGB 4KRCB 2WMAB 1G3NC 1H26B 4F6UB 4UN0A 1GY3B 3VKGA 1OIUB 2KMGA 1E7PA 2QF7A 2EUFA 3HO8A 3BHTB 4YC3B 3A8OB 2WEVB 3BG5A 2X1NB 2UZDB 2C5NB 1UGRB 4OB3B 1E9HB 2WPAB 2UZLB 1VOLA 2ZCFB 2D0QB 2ZPIB 4HNUA 2W9ZA 4I3ZB 4ZGEB 3TW6A 2DXCB 2CZ7B 5IDNB 2ZPHB 4MFDA 2CJMB 3A8GB 3B57A 2BKZB 3QWLA 1KXUA 2B9RA 4YOZA 4II5B 3BLRB 4CXAB 2W2HA 3DTOA 4CFXB 4BCNB 4YOSA 1XO2A 3MI9B 1UNGD 1H24B 3QYEA 4EOJB 5HNBB 1V29B 2QGSA 1H27B 4ELLA 2QDJA 4JX5A 5HBEB 2ZPFB 5LMKB 3VYHB 4FX3B 1C9BA 2W99A 4CFNB 3LQ5B 1UGQB 4FM4B 1N4MA 3H4CA 4BCMB 4AI6A 3WVDB 2PK9B 2C4GB 4BCHB 3BHUB 4EOKB 3F5XB 5BNJB 3QXEB 3QZ5B 1OIYB 3POMA 1H4LD 1F5QB 4ZGJB 1FINB 2QQ8A 4M6VA 2DMEA 3BG9A 1QMZB 4QSHA 4HNVA 1JKWA 2PHGA 3A8HB 1QLBA 2R7GA 4RODA 3PO3S 2IN3A 4BCPB 4TTHA 2CZ6B 4F7JB 3KHIA 3QHRB 1W98B 1OKVB 1D3UB 4MFEA 3X26B 3BLQB 1OL1B 4BCQB 2CYZB 4JX6A 3TW7A 1JSTB 3RGFB 2WIHB 1IREB 4BCJB 4HLQA 1JOWA 3EJ1B 2AHJB 4BCOB 4EOOB 5I5ZB 2JGZB 3MY5B 2BS2A 2IVXA 4BBRM 5CYIB 4EC9B 1TD6A 4BY1X 4ROCA 2UZEB 2I40B 4BCND 1H1QB 2ZPBB 2PMIB 1UNLD 4F70B 2BS4A 1ZP2A 5HBHB 4AKHA 3O0GD 2ZZDB 4F7NB 3QYHB 3X24B 5ACBA 4NSTB 3A8LB 1H1SB 4BCFB 4EOSB 3TNHB 5DQVA 4CFVB 3BHVB 5IF1B 4EOQB 3GTMS 3VKHA 4BCMD 5EJCA 2WFYB 1ENWA 1AISB 3QHWB 1H25B 1AHJB 2WXVB 3NDQA 2WJ9A 4BXXX 3HB9A 4CFUD 2BS3A 4BY7X 1BU2A 2WMBB 2DPPB 4OGRB 2C5XB 1URCB 2UZBB 2W96A 1TFBA 1O9KA 3EIDB 1UGPB 2DXBB 4BCQD 4JX4A 2WIPB 4CFUB 4IMYB 3DJBA 2CCHB 3QZ9B 1O9KB 1AD6A 4EONB 3QYBA 5L2WB 4CRLB 4KRDB 2F2CA 4ZGDB 3DDPB 2WHBB 2C6TB 2DD5B 4EORB 1H1RB 3A8MB 3TNIB 1P5EB 4G6LB 1PKDB 4BCIB 4EC8B 3X20B 3M03A 1VYWB 3HHTB 3DDQB 2DD4B 1GUXA 3X28B 2W9FA 3BG3A 5HVYB 4EOIB 4F7SB 5IDPB 2PK2A 4YOOA 3X25B 2QFZA 1GH6B 4OB2B 2CZ1B 3MIAB 4OB1B 4CFWB 5LQFB 2ZPEB 2LW4A 4F6SB 3BLHB 1GUXB 1UGSB 2V22B 3VYGB 2ZPGB 2CZ0B 2CCIB 5HBJB 4BCGB 5CEIB 2C5OB 4AKIA 3K7AM 4OR5B 5HQ0B 2QDYB 1OKWB 2IW8B 3DL1A 2PJQA 4BBSM 1FKMA 4LOCA 4NC6A 1UNHD 3EOCB 3WVEB 1VINA 2I53A 1FVVB 4HL4A 2BPMB 4F7LB 3DOGB 5DQWA 4Z6YA 2KR6A 1H1PB 4EOLB 2G77A 2G9XB 4AKGA 4EOMB 3HBLA 3TN8B 2IW6B 2UUEB 2IW9B 4OB0B 1H28B
chains in the Genus database with same CATH topology
4MIMA 3HZJA 4ZGDB 2DD5B 4HNTA 3QYEA 3A8MB 4ELJA 2ZPBB 2BS4A 1V29B 3X20B 4AKHA 2ZZDB 2QDJA 3HHTB 4JX5A 2ZPFB 3QYGB 2DD4B 3QYHB 3VYHB 3X28B 3BG3A 3X24B 3A8LB 1UGQB 4FM4B 3X25B 2QFZA 3H4CA 4AI6A 4OB2B 2CZ1B 3VKHA 4OB1B 3VKGA 3WVDB 2KMGA 2ZPEB 1E7PA 5EJCA 2QF7A 3HO8A 3A8OB 3BG5A 3QXEB 3QZ5B 1UGSB 3VYGB 4ZGJB 2ZPGB 2QQ8A 2CZ0B 4M6VA 1UGRB 3BG9A 4OB3B 1AHJB 2WJ9A 3HB9A 2BS3A 4QSHA 4HNVA 4AKIA 3A8HB 2ZCFB 2D0QB 2DPPB 1QLBA 2ZPIB 4HNUA 2QDYB 4ZGEB 3TW6A 2CZ6B 3KHIA 3DL1A 2DXCB 4BBSM 2CZ7B 1FKMA 4LOCA 4NC6A 4MFEA 3X26B 3WVEB 1UGPB 2ZPHB 4MFDA 2CYZB 2DXBB 4JX6A 3TW7A 1IREB 4HL4A 4JX4A 3A8GB 4Z6YA 2KR6A 4HLQA 2G77A 3QWLA 2AHJB 4AKGA 3HBLA 3QZ9B 3QYBA 4OB0B 2BS2A 4BBRM
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3QYH B;  3VYG B;  3VYH B;  3X26 B;  4ZGJ B;  2ZPG B;  3WVE B;  1UGP B;  2ZPH B;  3X28 B;  2CZ0 B;  2CYZ B;  2DXB B;  3X24 B;  1UGR B;  4OB3 B;  1IRE B;  3A8L B;  3QYG B;  4ZGD B;  1UGQ B;  3A8G B;  4FM4 B;  3X25 B;  1AHJ B;  2DD5 B;  3A8M B;  2ZPB B;  4OB2 B;  2CZ1 B;  4OB1 B;  3A8H B;  1V29 B;  2ZCF B;  3X20 B;  2D0Q B;  2DPP B;  3WVD B;  2AHJ B;  2ZPE B;  2ZPI B;  3QZ9 B;  2QDY B;  4ZGE B;  3A8O B;  2CZ6 B;  3QXE B;  4OB0 B;  3QZ5 B;  2ZZD B;  2DXC B;  3HHT B;  2CZ7 B;  2ZPF B;  2DD4 B;  1UGS B; 
#chains in the Genus database with same CATH topology
 4MIM A;  5FGK B;  4BCK B;  3TNW B;  3HZJ A;  4HNT A;  5IHY A;  4Y72 B;  4CFM B;  4ELJ A;  1JSU B;  1OGU B;  3G33 B;  1OL2 B;  1OI9 B;  4EOP B;  5EFQ B;  5ICP B;  4ROE A;  4F6W B;  3MY1 B;  2C5V B;  3QYG B;  4KRC B;  2WMA B;  1G3N C;  1H26 B;  4F6U B;  4UN0 A;  1GY3 B;  3VKG A;  1OIU B;  2KMG A;  1E7P A;  2QF7 A;  2EUF A;  3HO8 A;  3BHT B;  4YC3 B;  3A8O B;  2WEV B;  3BG5 A;  2X1N B;  2UZD B;  2C5N B;  1UGR B;  4OB3 B;  1E9H B;  2WPA B;  2UZL B;  1VOL A;  2ZCF B;  2D0Q B;  2ZPI B;  4HNU A;  2W9Z A;  4I3Z B;  4ZGE B;  3TW6 A;  2DXC B;  2CZ7 B;  5IDN B;  2ZPH B;  4MFD A;  2CJM B;  3A8G B;  3B57 A;  2BKZ B;  3QWL A;  1KXU A;  2B9R A;  4YOZ A;  4II5 B;  3BLR B;  4CXA B;  2W2H A;  3DTO A;  4CFX B;  4BCN B;  4YOS A;  1XO2 A;  3MI9 B;  1UNG D;  1H24 B;  3QYE A;  4EOJ B;  5HNB B;  1V29 B;  2QGS A;  1H27 B;  4ELL A;  2QDJ A;  4JX5 A;  5HBE B;  2ZPF B;  5LMK B;  3VYH B;  4FX3 B;  1C9B A;  2W99 A;  4CFN B;  3LQ5 B;  1UGQ B;  4FM4 B;  1N4M A;  3H4C A;  4BCM B;  4AI6 A;  3WVD B;  2PK9 B;  2C4G B;  4BCH B;  3BHU B;  4EOK B;  3F5X B;  5BNJ B;  3QXE B;  3QZ5 B;  1OIY B;  3POM A;  1H4L D;  1F5Q B;  4ZGJ B;  1FIN B;  2QQ8 A;  4M6V A;  2DME A;  3BG9 A;  1QMZ B;  4QSH A;  4HNV A;  1JKW A;  2PHG A;  3A8H B;  1QLB A;  2R7G A;  4ROD A;  3PO3 S;  2IN3 A;  4BCP B;  4TTH A;  2CZ6 B;  4F7J B;  3KHI A;  3QHR B;  1W98 B;  1OKV B;  1D3U B;  4MFE A;  3X26 B;  3BLQ B;  1OL1 B;  4BCQ B;  2CYZ B;  4JX6 A;  3TW7 A;  1JST B;  3RGF B;  2WIH B;  1IRE B;  4BCJ B;  4HLQ A;  1JOW A;  3EJ1 B;  2AHJ B;  4BCO B;  4EOO B;  5I5Z B;  2JGZ B;  3MY5 B;  2BS2 A;  2IVX A;  4BBR M;  5CYI B;  4EC9 B;  1TD6 A;  4BY1 X;  4ROC A;  2UZE B;  2I40 B;  4BCN D;  1H1Q B;  2ZPB B;  2PMI B;  1UNL D;  4F70 B;  2BS4 A;  1ZP2 A;  5HBH B;  4AKH A;  3O0G D;  2ZZD B;  4F7N B;  3QYH B;  3X24 B;  5ACB A;  4NST B;  3A8L B;  1H1S B;  4BCF B;  4EOS B;  3TNH B;  5DQV A;  4CFV B;  3BHV B;  5IF1 B;  4EOQ B;  3GTM S;  3VKH A;  4BCM D;  5EJC A;  2WFY B;  1ENW A;  1AIS B;  3QHW B;  1H25 B;  1AHJ B;  2WXV B;  3NDQ A;  2WJ9 A;  4BXX X;  3HB9 A;  4CFU D;  2BS3 A;  4BY7 X;  1BU2 A;  2WMB B;  2DPP B;  4OGR B;  2C5X B;  1URC B;  2UZB B;  2W96 A;  1TFB A;  1O9K A;  3EID B;  1UGP B;  2DXB B;  4BCQ D;  4JX4 A;  2WIP B;  4CFU B;  4IMY B;  3DJB A;  2CCH B;  3QZ9 B;  1O9K B;  1AD6 A;  4EON B;  3QYB A;  5L2W B;  4CRL B;  4KRD B;  2F2C A;  4ZGD B;  3DDP B;  2WHB B;  2C6T B;  2DD5 B;  4EOR B;  1H1R B;  3A8M B;  3TNI B;  1P5E B;  4G6L B;  1PKD B;  4BCI B;  4EC8 B;  3X20 B;  3M03 A;  1VYW B;  3HHT B;  3DDQ B;  2DD4 B;  1GUX A;  3X28 B;  2W9F A;  3BG3 A;  5HVY B;  4EOI B;  4F7S B;  5IDP B;  2PK2 A;  4YOO A;  3X25 B;  2QFZ A;  1GH6 B;  4OB2 B;  2CZ1 B;  3MIA B;  4OB1 B;  4CFW B;  5LQF B;  2ZPE B;  2LW4 A;  4F6S B;  3BLH B;  1GUX B;  1UGS B;  2V22 B;  3VYG B;  2ZPG B;  2CZ0 B;  2CCI B;  5HBJ B;  4BCG B;  5CEI B;  2C5O B;  4AKI A;  3K7A M;  4OR5 B;  5HQ0 B;  2QDY B;  1OKW B;  2IW8 B;  3DL1 A;  2PJQ A;  4BBS M;  1FKM A;  4LOC A;  4NC6 A;  1UNH D;  3EOC B;  3WVE B;  1VIN A;  2I53 A;  1FVV B;  4HL4 A;  2BPM B;  4F7L B;  3DOG B;  5DQW A;  4Z6Y A;  2KR6 A;  1H1P B;  4EOL B;  2G77 A;  2G9X B;  4AKG A;  4EOM B;  3HBL A;  3TN8 B;  2IW6 B;  2UUE B;  2IW9 B;  4OB0 B;  1H28 B; 
#chains in the Genus database with same CATH homology
 4MIM A;  3HZJ A;  4ZGD B;  2DD5 B;  4HNT A;  3QYE A;  3A8M B;  4ELJ A;  2ZPB B;  2BS4 A;  1V29 B;  3X20 B;  4AKH A;  2ZZD B;  2QDJ A;  3HHT B;  4JX5 A;  2ZPF B;  3QYG B;  2DD4 B;  3QYH B;  3VYH B;  3X28 B;  3BG3 A;  3X24 B;  3A8L B;  1UGQ B;  4FM4 B;  3X25 B;  2QFZ A;  3H4C A;  4AI6 A;  4OB2 B;  2CZ1 B;  3VKH A;  4OB1 B;  3VKG A;  3WVD B;  2KMG A;  2ZPE B;  1E7P A;  5EJC A;  2QF7 A;  3HO8 A;  3A8O B;  3BG5 A;  3QXE B;  3QZ5 B;  1UGS B;  3VYG B;  4ZGJ B;  2ZPG B;  2QQ8 A;  2CZ0 B;  4M6V A;  1UGR B;  3BG9 A;  4OB3 B;  1AHJ B;  2WJ9 A;  3HB9 A;  2BS3 A;  4QSH A;  4HNV A;  4AKI A;  3A8H B;  2ZCF B;  2D0Q B;  2DPP B;  1QLB A;  2ZPI B;  4HNU A;  2QDY B;  4ZGE B;  3TW6 A;  2CZ6 B;  3KHI A;  3DL1 A;  2DXC B;  4BBS M;  2CZ7 B;  1FKM A;  4LOC A;  4NC6 A;  4MFE A;  3X26 B;  3WVE B;  1UGP B;  2ZPH B;  4MFD A;  2CYZ B;  2DXB B;  4JX6 A;  3TW7 A;  1IRE B;  4HL4 A;  4JX4 A;  3A8G B;  4Z6Y A;  2KR6 A;  4HLQ A;  2G77 A;  3QWL A;  2AHJ B;  4AKG A;  3HBL A;  3QZ9 B;  3QYB A;  4OB0 B;  2BS2 A;  4BBR M; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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