2EJQA

Conserved hypothetical protein (ttha0227) from thermo thermophilus hb8
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
107
structure length
107
Chain Sequence
TYEAFVELVERLWEEVPEDFKRGLQGVHVFPEAKPEPGLEGVWRLGEYLDPGPPSAFGGFEDLGRHIALYYGSFLEVAGEGFDWEAEVWETMLHELRHHLESLAGRD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords Hypothetical protein TTHA0227
publication title Conserved hypothetical protein (TTHA0227) from Thermo thermophilus HB8
rcsb
source organism Thermus thermophilus
total genus 32
structure length 107
sequence length 107
chains with identical sequence B
ec nomenclature
pdb deposition date 2007-03-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF06262 Zincin_1 Zincin-like metallopeptidase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.2010.20 Alpha Beta 2-Layer Sandwich Zincin-like Zincin-like 2ejqA00
3E11A 2EJQA
chains in the Genus database with same CATH superfamily
3DSEA 1F31A 4ELCA 2ISGA 4KUFA 3E11A 4QHFA 2YPTA 3V0AA 1ZKWA 4ZKTB 3K3QB 1G9CA 3QW8A 3V0BA 3ZUSA 2W2DA 2ISHA 2XHLA 3DDAA 4IL3A 1S0CA 2A8AA 1ZL5A 1XTGA 1S0DA 1ZL6A 3QIZA 1S0EA 1Z7HA 3QJ0A 4ZJXA 1S0BA 2G7NA 4EL4A 1G9AA 2QN0A 3DS9A 2NP0A 3QW5A 2IMCA 3BONA 2G7QA 1ZKXA 1S0GA 3C89A 2IMAA 4JIUA 3V0AB 3BOKA 3DEBA 3C8BA 2ISEA 1I1EA 3V0BB 3QW7A 1ZB7A 5BQMA 1G9BA 2G7KA 3DDBA 1EPWA 1XTFA 2NZ9A 3QIYA 3NF3A 2A97A 3CQBA 3QIXA 4KS6A 2ETFA 3C88A 1ZN3A 1G9DA 1F82A 2NYYA 2EJQA 1E1HA 5BQNA 2IMBA 3VUOA 1S0FA 3ZUQA 4AW6A 4JIXA 4J1LA 4HEVA 3BTAA 3BOOA 3QW6A 1T3CA 3ZURA 2G7PA 3FFZA 2ILPA 3C8AA 3D3XA 3FIEA 3BWIA 4EJ5A 2FPQA 1YVGA 4KTXA 3FIIA 1T3AA
chains in the Genus database with same CATH topology
3E11A 2EJQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3E11 A;  2EJQ A; 
#chains in the Genus database with same CATH topology
 3DSE A;  1F31 A;  4ELC A;  2ISG A;  4KUF A;  3E11 A;  4QHF A;  2YPT A;  3V0A A;  1ZKW A;  4ZKT B;  3K3Q B;  1G9C A;  3QW8 A;  3V0B A;  3ZUS A;  2W2D A;  2ISH A;  2XHL A;  3DDA A;  4IL3 A;  1S0C A;  2A8A A;  1ZL5 A;  1XTG A;  1S0D A;  1ZL6 A;  3QIZ A;  1S0E A;  1Z7H A;  3QJ0 A;  4ZJX A;  1S0B A;  2G7N A;  4EL4 A;  1G9A A;  2QN0 A;  3DS9 A;  2NP0 A;  3QW5 A;  2IMC A;  3BON A;  2G7Q A;  1ZKX A;  1S0G A;  3C89 A;  2IMA A;  4JIU A;  3V0A B;  3BOK A;  3DEB A;  3C8B A;  2ISE A;  1I1E A;  3V0B B;  3QW7 A;  1ZB7 A;  5BQM A;  1G9B A;  2G7K A;  3DDB A;  1EPW A;  1XTF A;  2NZ9 A;  3QIY A;  3NF3 A;  2A97 A;  3CQB A;  3QIX A;  4KS6 A;  2ETF A;  3C88 A;  1ZN3 A;  1G9D A;  1F82 A;  2NYY A;  2EJQ A;  1E1H A;  5BQN A;  2IMB A;  3VUO A;  1S0F A;  3ZUQ A;  4AW6 A;  4JIX A;  4J1L A;  4HEV A;  3BTA A;  3BOO A;  3QW6 A;  1T3C A;  3ZUR A;  2G7P A;  3FFZ A;  2ILP A;  3C8A A;  3D3X A;  3FIE A;  3BWI A;  4EJ5 A;  2FPQ A;  1YVG A;  4KTX A;  3FII A;  1T3A A; 
#chains in the Genus database with same CATH homology
 3E11 A;  2EJQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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