2EL3A

Structural study of project id ph0725 from pyrococcus horikoshii ot3 (l242m)
Total Genus 81
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
81
sequence length
265
structure length
265
Chain Sequence
MVLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKMHIVEAEYLVEIAGAPREILRVNV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords diphthine synthase
publication title Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L242M)
rcsb
source organism Pyrococcus horikoshii
total genus 81
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2el3A02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2el3A01
2ELDA 2OWVA 3NEIA 2E4NA 2NPNA 2PB5A 2BB3A 3NUTA 2E4RA 2EL2A 3NDCA 2E08A 2ED3A 2EK7A 2E8HA 2HUQA 2EL1A 2DV3A 2DV5A 1PJSA 2E16A 2E15A 1CBFA 2PCAA 2EJZA 2E17A 2EH5A 2DSIA 2E7RA 1S4DA 2EHLA 2EEQA 2YBQA 2OWFA 1WDEA 1PJQA 2P5FA 2HUTA 2HR8A 2DSHA 2EL3A 2EHCA 2EJKA 2DXWA 2EK2A 3ND1A 2EH4A 2E8SA 2EMRA 2EGLA 2EL0A 2P6LA 1VHVA 2E0NA 2PCKA 4E16A 1VA0A 2YBOA 2DV7A 1V9AA 2PB6A 2EMUA 2P5CA 2DEKA 2EJJA 1PJTA 2HUVA 2PCMA 2Z6RA 2CBFA 2OWUA 2ZVBA 2ENIA 3KWPA 2EK3A 2EN5A 2PB4A 2EKAA 3HH1A 2EK4A 2PCIA 2E0KA 2DV4A 2QBUA 2P9DA 3FFYA 3I4TA 2EGBA 2DXVA 3FQ6A 1WYZA 2OWGA 2E8QA 2PCHA 5HW4A 2PCGA 2ELEA 2ED5A 2DSGA 2OWKA 2P6IA 2P6KA 2EGSA 2DXXA 2ZVCA 1VE2A 2E07A 2E8RA 1VCEA 2HUXA 2P2XA 1WNGA 2EH2A 2P6DA
chains in the Genus database with same CATH superfamily
2ELDA 2OWVA 3NEIA 2E4NA 2NPNA 2PB5A 3LMMA 2BB3A 3KEMA 3T0FA 3DNFA 3NUTA 2E4RA 2EL2A 3NDCA 2E08A 2ED3A 4H4CA 2EK7A 2E8HA 3SZUA 2HUQA 2EL1A 2DV3A 2DV5A 1PJSA 3TIXB 2E16A 2E15A 1CBFA 2PCAA 2EJZA 2E17A 4MUXA 3T0GA 2EH5A 2DSIA 2E7RA 1S4DA 2EHLA 2EEQA 2YBQA 2OWFA 1WDEA 1PJQA 2P5FA 2HUTA 3UV6A 2HR8A 2DSHA 2EL3A 2EHCA 2EJKA 3SZOA 2DXWA 2EK2A 3ND1A 2EH4A 2E8SA 2EMRA 2EGLA 2EL0A 2P6LA 1VHVA 2E0NA 2PCKA 3KEFA 4E16A 1VA0A 2YBOA 3ZGLA 4H4DA 3KE9A 2DV7A 2KYYA 1V9AA 3UTDA 2PB6A 2EMUA 2P5CA 2DEKA 3ZGNA 3UTCA 2EJJA 1PJTA 2HUVA 2PCMA 2Z6RA 3UV7A 2CBFA 2OWUA 2ZVBA 2ENIA 4N7BA 3KWPA 2EK3A 2EN5A 2PB4A 4MV0A 2EKAA 3HH1A 3UWMA 2EK4A 2PCIA 4MUYA 4H4EA 3F7TA 2E0KA 2DV4A 2QBUA 2P9DA 3KELA 3FFYA 3I4TA 2EGBA 2DXVA 3FQ6A 1WYZA 2OWGA 2E8QA 2PCHA 3URKA 5HW4A 2PCGA 3SZLA 2ELEA 2ED5A 4MV5A 2DSGA 3UV3A 2OWKA 2P6IA 2P6KA 2EGSA 2DXXA 2ZVCA 1VE2A 2E07A 2E8RA 1VCEA 2HUXA 4EB3A 2P2XA 1WNGA 2EH2A 2P6DA 3KE8A
chains in the Genus database with same CATH topology
2ELDA 2OWVA 3NEIA 2E4NA 2NPNA 2PB5A 3LMMA 2BB3A 3KEMA 3T0FA 3DNFA 3NUTA 2E4RA 2EL2A 3NDCA 2E08A 2ED3A 4H4CA 2EK7A 2E8HA 3SZUA 2HUQA 2EL1A 2DV3A 2DV5A 1PJSA 3TIXB 2E16A 2E15A 1CBFA 2PCAA 2EJZA 2E17A 4MUXA 3T0GA 2EH5A 2DSIA 2E7RA 1S4DA 2EHLA 2EEQA 2YBQA 2OWFA 1WDEA 1PJQA 2P5FA 2HUTA 3UV6A 2HR8A 2DSHA 2EL3A 2EHCA 2EJKA 3SZOA 2DXWA 2EK2A 3ND1A 2EH4A 2E8SA 2EMRA 2EGLA 2EL0A 2P6LA 1VHVA 2E0NA 2PCKA 3KEFA 4E16A 1VA0A 2YBOA 3ZGLA 4H4DA 3KE9A 2DV7A 2KYYA 1V9AA 3UTDA 2PB6A 2EMUA 2P5CA 2DEKA 3ZGNA 3UTCA 2EJJA 1PJTA 2HUVA 2PCMA 2Z6RA 3UV7A 2CBFA 2OWUA 2ZVBA 2ENIA 4N7BA 3KWPA 2EK3A 2EN5A 2PB4A 4MV0A 2EKAA 3HH1A 3UWMA 2EK4A 2PCIA 4MUYA 4H4EA 3F7TA 2E0KA 2DV4A 2QBUA 2P9DA 3KELA 3FFYA 3I4TA 2EGBA 2DXVA 3FQ6A 1WYZA 2OWGA 2E8QA 2PCHA 3URKA 5HW4A 2PCGA 3SZLA 2ELEA 2ED5A 4MV5A 2DSGA 3UV3A 2OWKA 2P6IA 2P6KA 2EGSA 2DXXA 2ZVCA 1VE2A 2E07A 2E8RA 1VCEA 2HUXA 4EB3A 2P2XA 1WNGA 2EH2A 2P6DA 3KE8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ELD A;  2OWV A;  3NEI A;  2E4N A;  2NPN A;  2PB5 A;  2BB3 A;  3NUT A;  2E4R A;  2EL2 A;  3NDC A;  2E08 A;  2ED3 A;  2EK7 A;  2E8H A;  2HUQ A;  2EL1 A;  2DV3 A;  2DV5 A;  1PJS A;  2E16 A;  2E15 A;  1CBF A;  2PCA A;  2EJZ A;  2E17 A;  2EH5 A;  2DSI A;  2E7R A;  1S4D A;  2EHL A;  2EEQ A;  2YBQ A;  2OWF A;  1WDE A;  1PJQ A;  2P5F A;  2HUT A;  2HR8 A;  2DSH A;  2EL3 A;  2EHC A;  2EJK A;  2DXW A;  2EK2 A;  3ND1 A;  2EH4 A;  2E8S A;  2EMR A;  2EGL A;  2EL0 A;  2P6L A;  1VHV A;  2E0N A;  2PCK A;  4E16 A;  1VA0 A;  2YBO A;  2DV7 A;  1V9A A;  2PB6 A;  2EMU A;  2P5C A;  2DEK A;  2EJJ A;  1PJT A;  2HUV A;  2PCM A;  2Z6R A;  2CBF A;  2OWU A;  2ZVB A;  2ENI A;  3KWP A;  2EK3 A;  2EN5 A;  2PB4 A;  2EKA A;  3HH1 A;  2EK4 A;  2PCI A;  2E0K A;  2DV4 A;  2QBU A;  2P9D A;  3FFY A;  3I4T A;  2EGB A;  2DXV A;  3FQ6 A;  1WYZ A;  2OWG A;  2E8Q A;  2PCH A;  5HW4 A;  2PCG A;  2ELE A;  2ED5 A;  2DSG A;  2OWK A;  2P6I A;  2P6K A;  2EGS A;  2DXX A;  2ZVC A;  1VE2 A;  2E07 A;  2E8R A;  1VCE A;  2HUX A;  2P2X A;  1WNG A;  2EH2 A;  2P6D A; 
#chains in the Genus database with same CATH topology
 2ELD A;  2OWV A;  3NEI A;  2E4N A;  2NPN A;  2PB5 A;  3LMM A;  2BB3 A;  3KEM A;  3T0F A;  3DNF A;  3NUT A;  2E4R A;  2EL2 A;  3NDC A;  2E08 A;  2ED3 A;  4H4C A;  2EK7 A;  2E8H A;  3SZU A;  2HUQ A;  2EL1 A;  2DV3 A;  2DV5 A;  1PJS A;  3TIX B;  2E16 A;  2E15 A;  1CBF A;  2PCA A;  2EJZ A;  2E17 A;  4MUX A;  3T0G A;  2EH5 A;  2DSI A;  2E7R A;  1S4D A;  2EHL A;  2EEQ A;  2YBQ A;  2OWF A;  1WDE A;  1PJQ A;  2P5F A;  2HUT A;  3UV6 A;  2HR8 A;  2DSH A;  2EL3 A;  2EHC A;  2EJK A;  3SZO A;  2DXW A;  2EK2 A;  3ND1 A;  2EH4 A;  2E8S A;  2EMR A;  2EGL A;  2EL0 A;  2P6L A;  1VHV A;  2E0N A;  2PCK A;  3KEF A;  4E16 A;  1VA0 A;  2YBO A;  3ZGL A;  4H4D A;  3KE9 A;  2DV7 A;  2KYY A;  1V9A A;  3UTD A;  2PB6 A;  2EMU A;  2P5C A;  2DEK A;  3ZGN A;  3UTC A;  2EJJ A;  1PJT A;  2HUV A;  2PCM A;  2Z6R A;  3UV7 A;  2CBF A;  2OWU A;  2ZVB A;  2ENI A;  4N7B A;  3KWP A;  2EK3 A;  2EN5 A;  2PB4 A;  4MV0 A;  2EKA A;  3HH1 A;  3UWM A;  2EK4 A;  2PCI A;  4MUY A;  4H4E A;  3F7T A;  2E0K A;  2DV4 A;  2QBU A;  2P9D A;  3KEL A;  3FFY A;  3I4T A;  2EGB A;  2DXV A;  3FQ6 A;  1WYZ A;  2OWG A;  2E8Q A;  2PCH A;  3URK A;  5HW4 A;  2PCG A;  3SZL A;  2ELE A;  2ED5 A;  4MV5 A;  2DSG A;  3UV3 A;  2OWK A;  2P6I A;  2P6K A;  2EGS A;  2DXX A;  2ZVC A;  1VE2 A;  2E07 A;  2E8R A;  1VCE A;  2HUX A;  4EB3 A;  2P2X A;  1WNG A;  2EH2 A;  2P6D A;  3KE8 A; 
#chains in the Genus database with same CATH homology
 2ELD A;  2OWV A;  3NEI A;  2E4N A;  2NPN A;  2PB5 A;  3LMM A;  2BB3 A;  3KEM A;  3T0F A;  3DNF A;  3NUT A;  2E4R A;  2EL2 A;  3NDC A;  2E08 A;  2ED3 A;  4H4C A;  2EK7 A;  2E8H A;  3SZU A;  2HUQ A;  2EL1 A;  2DV3 A;  2DV5 A;  1PJS A;  3TIX B;  2E16 A;  2E15 A;  1CBF A;  2PCA A;  2EJZ A;  2E17 A;  4MUX A;  3T0G A;  2EH5 A;  2DSI A;  2E7R A;  1S4D A;  2EHL A;  2EEQ A;  2YBQ A;  2OWF A;  1WDE A;  1PJQ A;  2P5F A;  2HUT A;  3UV6 A;  2HR8 A;  2DSH A;  2EL3 A;  2EHC A;  2EJK A;  3SZO A;  2DXW A;  2EK2 A;  3ND1 A;  2EH4 A;  2E8S A;  2EMR A;  2EGL A;  2EL0 A;  2P6L A;  1VHV A;  2E0N A;  2PCK A;  3KEF A;  4E16 A;  1VA0 A;  2YBO A;  3ZGL A;  4H4D A;  3KE9 A;  2DV7 A;  2KYY A;  1V9A A;  3UTD A;  2PB6 A;  2EMU A;  2P5C A;  2DEK A;  3ZGN A;  3UTC A;  2EJJ A;  1PJT A;  2HUV A;  2PCM A;  2Z6R A;  3UV7 A;  2CBF A;  2OWU A;  2ZVB A;  2ENI A;  4N7B A;  3KWP A;  2EK3 A;  2EN5 A;  2PB4 A;  4MV0 A;  2EKA A;  3HH1 A;  3UWM A;  2EK4 A;  2PCI A;  4MUY A;  4H4E A;  3F7T A;  2E0K A;  2DV4 A;  2QBU A;  2P9D A;  3KEL A;  3FFY A;  3I4T A;  2EGB A;  2DXV A;  3FQ6 A;  1WYZ A;  2OWG A;  2E8Q A;  2PCH A;  3URK A;  5HW4 A;  2PCG A;  3SZL A;  2ELE A;  2ED5 A;  4MV5 A;  2DSG A;  3UV3 A;  2OWK A;  2P6I A;  2P6K A;  2EGS A;  2DXX A;  2ZVC A;  1VE2 A;  2E07 A;  2E8R A;  1VCE A;  2HUX A;  4EB3 A;  2P2X A;  1WNG A;  2EH2 A;  2P6D A;  3KE8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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