2ELCA

Crystal structure of ttha1842 from thermus thermophilus hb8
Total Genus 116
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
116
sequence length
329
structure length
329
Chain Sequence
MDAVKKAILGEVLEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLGARGLVVHGEGADELVLGENRVVEVGKGAYALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYAAGKTPSLKEGVALAREVLASGEAYLLLERYVAFLRA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Anthranilate phosphoribosyltransferase
publication title Crystal structure of TTHA1842 from Thermus thermophilus HB8
rcsb
source organism Thermus thermophilus
total genus 116
structure length 329
sequence length 329
chains with identical sequence B, C, D
ec nomenclature ec 2.4.2.18: Anthranilate phosphoribosyltransferase.
pdb deposition date 2007-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00591 Glycos_transf_3 Glycosyl transferase family, a/b domain
A PF02885 Glycos_trans_3N Glycosyl transferase family, helical bundle domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.970.10 Mainly Alpha Up-down Bundle Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 2elcA01
3.40.1030.10 Alpha Beta 3-Layer(aba) Sandwich Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 2elcA02
5EY3A 1KHDA 4OWQA 3R6CA 4GA6A 1VQUA 5C1RA 4X5DA 5EP8A 1UOUA 2J0FA 4GA4A 2DSJA 4ZTVA 1AZYA 5BO2A 3QR9A 1OTPA 4X5BA 4GA5A 4X46A 5BO3A 3H5QA 2ELCA 4IJ1A 4LHMA 4N93A 1O17A 4X5AA 4MUOA 4ZOKA 5C2LA 2BPQA 4N8QA 4XR5A 4GIUA 4YI7A 4X59A 1ZVWA 4EAFA 4OWSA 3QS8A 3R88A 1ZYKA 3UU1A 4GKMA 1GXBA 4OWOA 1V8GA 1KGZA 4ZOFA 4ZOJA 2TPTA 4OWUA 5BNEA 5C7SA 3GBRA 3QQSA 4OWNA 4X5CA 4X5EA 2WK6A 4OWVA 2GVQA 4YEKA 4HKMA 4M0RA 4N5VA 2WK5A 5BYTA 4EADA 4X58A 1BRWA 4YYYA 3TWPA 4OWMA 4GTNA 1ZXYA 3QSAA
chains in the Genus database with same CATH superfamily
5EY3A 1KHDA 4OWQA 3R6CA 4GA6A 1VQUA 5C1RA 4X5DA 5EP8A 1UOUA 2J0FA 4GA4A 2DSJA 4ZTVA 1AZYA 5BO2A 3QR9A 1OTPA 1RRZA 4X5BA 4GA5A 4X46A 5BO3A 3H5QA 2ELCA 4IJ1A 4LHMA 4N93A 1O17A 4X5AA 4MUOA 4ZOKA 5C2LA 2BPQA 4N8QA 4XR5A 4GIUA 4YI7A 4F3FC 4X59A 1ZVWA 4EAFA 4OWSA 3QS8A 1RF8B 3R88A 1ZYKA 3UU1A 4GKMA 1GXBA 4OWOA 1V8GA 1KGZA 4ZOFA 4ZOJA 2TPTA 4OWUA 5BNEA 5C7SA 3GBRA 3QQSA 4OWNA 4X5CA 4X5EA 2WK6A 4OWVA 2GVQA 4YEKA 4HKMA 4M0RA 4N5VA 2WK5A 5BYTA 4EADA 4X58A 1BRWA 4YYYA 3TWPA 4OWMA 4GTNA 1ZXYA 3QSAA
chains in the Genus database with same CATH topology
5EY3A 1KHDA 4OWQA 3R6CA 4GA6A 1VQUA 5C1RA 4X5DA 5EP8A 1UOUA 2J0FA 4GA4A 2DSJA 4ZTVA 1AZYA 5BO2A 3QR9A 1OTPA 4X5BA 4GA5A 4X46A 5BO3A 3H5QA 2ELCA 4IJ1A 4LHMA 4N93A 1O17A 4X5AA 4MUOA 4ZOKA 5C2LA 2BPQA 4N8QA 4XR5A 4GIUA 4YI7A 4X59A 1ZVWA 4EAFA 4OWSA 3QS8A 3R88A 1ZYKA 3UU1A 4GKMA 1GXBA 4OWOA 1V8GA 1KGZA 4ZOFA 4ZOJA 2TPTA 4OWUA 5BNEA 5C7SA 3GBRA 3QQSA 4OWNA 4X5CA 4X5EA 2WK6A 4OWVA 2GVQA 4YEKA 4HKMA 4M0RA 4N5VA 2WK5A 5BYTA 4EADA 4X58A 1BRWA 4YYYA 3TWPA 4OWMA 4GTNA 1ZXYA 3QSAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5EY3 A;  1KHD A;  4OWQ A;  3R6C A;  4GA6 A;  1VQU A;  5C1R A;  4X5D A;  5EP8 A;  1UOU A;  2J0F A;  4GA4 A;  2DSJ A;  4ZTV A;  1AZY A;  5BO2 A;  3QR9 A;  1OTP A;  4X5B A;  4GA5 A;  4X46 A;  5BO3 A;  3H5Q A;  2ELC A;  4IJ1 A;  4LHM A;  4N93 A;  1O17 A;  4X5A A;  4MUO A;  4ZOK A;  5C2L A;  2BPQ A;  4N8Q A;  4XR5 A;  4GIU A;  4YI7 A;  4X59 A;  1ZVW A;  4EAF A;  4OWS A;  3QS8 A;  3R88 A;  1ZYK A;  3UU1 A;  4GKM A;  1GXB A;  4OWO A;  1V8G A;  1KGZ A;  4ZOF A;  4ZOJ A;  2TPT A;  4OWU A;  5BNE A;  5C7S A;  3GBR A;  3QQS A;  4OWN A;  4X5C A;  4X5E A;  2WK6 A;  4OWV A;  2GVQ A;  4YEK A;  4HKM A;  4M0R A;  4N5V A;  2WK5 A;  5BYT A;  4EAD A;  4X58 A;  1BRW A;  4YYY A;  3TWP A;  4OWM A;  4GTN A;  1ZXY A;  3QSA A; 
#chains in the Genus database with same CATH topology
 5EY3 A;  1KHD A;  4OWQ A;  3R6C A;  4GA6 A;  1VQU A;  5C1R A;  4X5D A;  5EP8 A;  1UOU A;  2J0F A;  4GA4 A;  2DSJ A;  4ZTV A;  1AZY A;  5BO2 A;  3QR9 A;  1OTP A;  1RRZ A;  4X5B A;  4GA5 A;  4X46 A;  5BO3 A;  3H5Q A;  2ELC A;  4IJ1 A;  4LHM A;  4N93 A;  1O17 A;  4X5A A;  4MUO A;  4ZOK A;  5C2L A;  2BPQ A;  4N8Q A;  4XR5 A;  4GIU A;  4YI7 A;  4F3F C;  4X59 A;  1ZVW A;  4EAF A;  4OWS A;  3QS8 A;  1RF8 B;  3R88 A;  1ZYK A;  3UU1 A;  4GKM A;  1GXB A;  4OWO A;  1V8G A;  1KGZ A;  4ZOF A;  4ZOJ A;  2TPT A;  4OWU A;  5BNE A;  5C7S A;  3GBR A;  3QQS A;  4OWN A;  4X5C A;  4X5E A;  2WK6 A;  4OWV A;  2GVQ A;  4YEK A;  4HKM A;  4M0R A;  4N5V A;  2WK5 A;  5BYT A;  4EAD A;  4X58 A;  1BRW A;  4YYY A;  3TWP A;  4OWM A;  4GTN A;  1ZXY A;  3QSA A; 
#chains in the Genus database with same CATH homology
 5EY3 A;  1KHD A;  4OWQ A;  3R6C A;  4GA6 A;  1VQU A;  5C1R A;  4X5D A;  5EP8 A;  1UOU A;  2J0F A;  4GA4 A;  2DSJ A;  4ZTV A;  1AZY A;  5BO2 A;  3QR9 A;  1OTP A;  4X5B A;  4GA5 A;  4X46 A;  5BO3 A;  3H5Q A;  2ELC A;  4IJ1 A;  4LHM A;  4N93 A;  1O17 A;  4X5A A;  4MUO A;  4ZOK A;  5C2L A;  2BPQ A;  4N8Q A;  4XR5 A;  4GIU A;  4YI7 A;  4X59 A;  1ZVW A;  4EAF A;  4OWS A;  3QS8 A;  3R88 A;  1ZYK A;  3UU1 A;  4GKM A;  1GXB A;  4OWO A;  1V8G A;  1KGZ A;  4ZOF A;  4ZOJ A;  2TPT A;  4OWU A;  5BNE A;  5C7S A;  3GBR A;  3QQS A;  4OWN A;  4X5C A;  4X5E A;  2WK6 A;  4OWV A;  2GVQ A;  4YEK A;  4HKM A;  4M0R A;  4N5V A;  2WK5 A;  5BYT A;  4EAD A;  4X58 A;  1BRW A;  4YYY A;  3TWP A;  4OWM A;  4GTN A;  1ZXY A;  3QSA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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