2ELEA

Mutant v18c structure of ph0725 from pyrococcus horikoshii ot3
Total Genus 82
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
82
sequence length
265
structure length
265
Chain Sequence
b'MVLYFIGLGLYDERDITCKGLEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGAPREILRVNV'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords diphthine synthase
publication title Mutant V18C structure of PH0725 from Pyrococcus horikoshii OT3
rcsb
source organism Pyrococcus horikoshii
molecule tags Transferase
total genus 82
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2eleA02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2eleA01
2P2XA 2P5CA 2EL3A 2HUTA 3NUTA 2EH5A 2ED5A 2PCAA 2P6DA 2NPNA 2PCKA 2EK2A 4E16A 2EK7A 2BB3A 2E08A 2DSHA 2DV3A 2P9DA 2YBQA 2Z6RA 2ELDA 2E8HA 2EL1A 2PCGA 2EN5A 2E4NA 2P6IA 3NEIA 2EHCA 2EJKA 2P5FA 2PCMA 2EL2A 2ELEA 2ED3A 2DV4A 2EMUA 1CBFA 1PJSA 2EGBA 3FFYA 2P6KA 2ENIA 3HH1A 2OWUA 1V9AA 1WYZA 2OWFA 1WDEA 2EKAA 2E4RA 2E8QA 2E8RA 3KWPA 1S4DA 2EL0A 1VA0A 2E0NA 2E07A 2QBUA 1PJQA 2EHLA 1VE2A 2HUQA 2OWKA 2HUVA 2EK4A 2EK3A 2EGLA 2OWGA 2E7RA 2DSGA 2PB6A 2E8SA 2EH2A 1VHVA 2DV5A 2EJJA 2E17A 3I4TA 2PB4A 2OWVA 2E0KA 1WNGA 2P6LA 2ZVBA 2EGSA 2YBOA 2CBFA 3ND1A 2PCHA 5HW4A 2DXVA 2ZVCA 1VCEA 2DXWA 2DXXA 2HR8A 3FQ6A 2PCIA 2DEKA 2PB5A 2EH4A 2HUXA 2EJZA 2E15A 2E16A 2EMRA 2EEQA 2DSIA 2DV7A 3NDCA 1PJTA
chains in the Genus database with same CATH superfamily
2P2XA 3F7TA 2P5CA 2EL3A 2HUTA 3NUTA 2EH5A 2ED5A 2PCAA 2P6DA 2NPNA 2PCKA 2EK2A 3LMMA 3SZOA 4E16A 2EK7A 2BB3A 2E08A 2DSHA 2DV3A 2P9DA 2YBQA 2Z6RA 4H4CA 2ELDA 2E8HA 2EL1A 2PCGA 3SZUA 2EN5A 3TIXB 2E4NA 2P6IA 3NEIA 2EHCA 4MUYA 2EJKA 2P5FA 4MV0A 3KE9A 4MV5A 2PCMA 2EL2A 2ELEA 2ED3A 2DV4A 4MUXA 3UTDA 2EMUA 1CBFA 2KYYA 3KEFA 1PJSA 2EGBA 3FFYA 2P6KA 2ENIA 3KELA 3ZGNA 3UV7A 3HH1A 2OWUA 1V9AA 1WYZA 2OWFA 4H4EA 3KEMA 1WDEA 3UWMA 2EKAA 2E4RA 2E8QA 2E8RA 3KWPA 1S4DA 2EL0A 1VA0A 2E0NA 2E07A 2QBUA 1PJQA 3ZGLA 4EB3A 2EHLA 1VE2A 2HUQA 3UV3A 2OWKA 2HUVA 2EK4A 2EK3A 2EGLA 2OWGA 3SZLA 2E7RA 2DSGA 2PB6A 3T0GA 2E8SA 3UV6A 4N7BA 3T0FA 3DNFA 2EH2A 1VHVA 2DV5A 2EJJA 2E17A 3I4TA 2PB4A 2OWVA 2E0KA 1WNGA 2P6LA 2ZVBA 2EGSA 2YBOA 2CBFA 3ND1A 2PCHA 5HW4A 2DXVA 3KE8A 3URKA 2ZVCA 1VCEA 2DXWA 2DXXA 2HR8A 3FQ6A 2PCIA 2DEKA 2PB5A 2EH4A 2HUXA 2EJZA 2E15A 2E16A 2EMRA 2EEQA 4H4DA 2DSIA 2DV7A 3NDCA 1PJTA 3UTCA
chains in the Genus database with same CATH topology
2P2XA 3F7TA 2P5CA 2EL3A 2HUTA 3NUTA 2EH5A 2ED5A 2PCAA 2P6DA 2NPNA 2PCKA 2EK2A 3LMMA 3SZOA 4E16A 2EK7A 2BB3A 2E08A 2DSHA 2DV3A 2P9DA 2YBQA 2Z6RA 4H4CA 2ELDA 2E8HA 2EL1A 2PCGA 3SZUA 2EN5A 3TIXB 2E4NA 2P6IA 3NEIA 2EHCA 4MUYA 2EJKA 2P5FA 4MV0A 3KE9A 4MV5A 2PCMA 2EL2A 2ELEA 2ED3A 2DV4A 4MUXA 3UTDA 2EMUA 1CBFA 2KYYA 3KEFA 1PJSA 2EGBA 3FFYA 2P6KA 2ENIA 3KELA 3ZGNA 3UV7A 3HH1A 2OWUA 1V9AA 1WYZA 2OWFA 4H4EA 3KEMA 1WDEA 3UWMA 2EKAA 2E4RA 2E8QA 2E8RA 3KWPA 1S4DA 2EL0A 1VA0A 2E0NA 2E07A 2QBUA 1PJQA 3ZGLA 4EB3A 2EHLA 1VE2A 2HUQA 3UV3A 2OWKA 2HUVA 2EK4A 2EK3A 2EGLA 2OWGA 3SZLA 2E7RA 2DSGA 2PB6A 3T0GA 2E8SA 3UV6A 4N7BA 3T0FA 3DNFA 2EH2A 1VHVA 2DV5A 2EJJA 2E17A 3I4TA 2PB4A 2OWVA 2E0KA 1WNGA 2P6LA 2ZVBA 2EGSA 2YBOA 2CBFA 3ND1A 2PCHA 5HW4A 2DXVA 3KE8A 3URKA 2ZVCA 1VCEA 2DXWA 2DXXA 2HR8A 3FQ6A 2PCIA 2DEKA 2PB5A 2EH4A 2HUXA 2EJZA 2E15A 2E16A 2EMRA 2EEQA 4H4DA 2DSIA 2DV7A 3NDCA 1PJTA 3UTCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2P2X A;  2P5C A;  2EL3 A;  2HUT A;  3NUT A;  2EH5 A;  2ED5 A;  2PCA A;  2P6D A;  2NPN A;  2PCK A;  2EK2 A;  4E16 A;  2EK7 A;  2BB3 A;  2E08 A;  2DSH A;  2DV3 A;  2P9D A;  2YBQ A;  2Z6R A;  2ELD A;  2E8H A;  2EL1 A;  2PCG A;  2EN5 A;  2E4N A;  2P6I A;  3NEI A;  2EHC A;  2EJK A;  2P5F A;  2PCM A;  2EL2 A;  2ELE A;  2ED3 A;  2DV4 A;  2EMU A;  1CBF A;  1PJS A;  2EGB A;  3FFY A;  2P6K A;  2ENI A;  3HH1 A;  2OWU A;  1V9A A;  1WYZ A;  2OWF A;  1WDE A;  2EKA A;  2E4R A;  2E8Q A;  2E8R A;  3KWP A;  1S4D A;  2EL0 A;  1VA0 A;  2E0N A;  2E07 A;  2QBU A;  1PJQ A;  2EHL A;  1VE2 A;  2HUQ A;  2OWK A;  2HUV A;  2EK4 A;  2EK3 A;  2EGL A;  2OWG A;  2E7R A;  2DSG A;  2PB6 A;  2E8S A;  2EH2 A;  1VHV A;  2DV5 A;  2EJJ A;  2E17 A;  3I4T A;  2PB4 A;  2OWV A;  2E0K A;  1WNG A;  2P6L A;  2ZVB A;  2EGS A;  2YBO A;  2CBF A;  3ND1 A;  2PCH A;  5HW4 A;  2DXV A;  2ZVC A;  1VCE A;  2DXW A;  2DXX A;  2HR8 A;  3FQ6 A;  2PCI A;  2DEK A;  2PB5 A;  2EH4 A;  2HUX A;  2EJZ A;  2E15 A;  2E16 A;  2EMR A;  2EEQ A;  2DSI A;  2DV7 A;  3NDC A;  1PJT A; 
#chains in the Genus database with same CATH topology
 2P2X A;  3F7T A;  2P5C A;  2EL3 A;  2HUT A;  3NUT A;  2EH5 A;  2ED5 A;  2PCA A;  2P6D A;  2NPN A;  2PCK A;  2EK2 A;  3LMM A;  3SZO A;  4E16 A;  2EK7 A;  2BB3 A;  2E08 A;  2DSH A;  2DV3 A;  2P9D A;  2YBQ A;  2Z6R A;  4H4C A;  2ELD A;  2E8H A;  2EL1 A;  2PCG A;  3SZU A;  2EN5 A;  3TIX B;  2E4N A;  2P6I A;  3NEI A;  2EHC A;  4MUY A;  2EJK A;  2P5F A;  4MV0 A;  3KE9 A;  4MV5 A;  2PCM A;  2EL2 A;  2ELE A;  2ED3 A;  2DV4 A;  4MUX A;  3UTD A;  2EMU A;  1CBF A;  2KYY A;  3KEF A;  1PJS A;  2EGB A;  3FFY A;  2P6K A;  2ENI A;  3KEL A;  3ZGN A;  3UV7 A;  3HH1 A;  2OWU A;  1V9A A;  1WYZ A;  2OWF A;  4H4E A;  3KEM A;  1WDE A;  3UWM A;  2EKA A;  2E4R A;  2E8Q A;  2E8R A;  3KWP A;  1S4D A;  2EL0 A;  1VA0 A;  2E0N A;  2E07 A;  2QBU A;  1PJQ A;  3ZGL A;  4EB3 A;  2EHL A;  1VE2 A;  2HUQ A;  3UV3 A;  2OWK A;  2HUV A;  2EK4 A;  2EK3 A;  2EGL A;  2OWG A;  3SZL A;  2E7R A;  2DSG A;  2PB6 A;  3T0G A;  2E8S A;  3UV6 A;  4N7B A;  3T0F A;  3DNF A;  2EH2 A;  1VHV A;  2DV5 A;  2EJJ A;  2E17 A;  3I4T A;  2PB4 A;  2OWV A;  2E0K A;  1WNG A;  2P6L A;  2ZVB A;  2EGS A;  2YBO A;  2CBF A;  3ND1 A;  2PCH A;  5HW4 A;  2DXV A;  3KE8 A;  3URK A;  2ZVC A;  1VCE A;  2DXW A;  2DXX A;  2HR8 A;  3FQ6 A;  2PCI A;  2DEK A;  2PB5 A;  2EH4 A;  2HUX A;  2EJZ A;  2E15 A;  2E16 A;  2EMR A;  2EEQ A;  4H4D A;  2DSI A;  2DV7 A;  3NDC A;  1PJT A;  3UTC A; 
#chains in the Genus database with same CATH homology
 2P2X A;  3F7T A;  2P5C A;  2EL3 A;  2HUT A;  3NUT A;  2EH5 A;  2ED5 A;  2PCA A;  2P6D A;  2NPN A;  2PCK A;  2EK2 A;  3LMM A;  3SZO A;  4E16 A;  2EK7 A;  2BB3 A;  2E08 A;  2DSH A;  2DV3 A;  2P9D A;  2YBQ A;  2Z6R A;  4H4C A;  2ELD A;  2E8H A;  2EL1 A;  2PCG A;  3SZU A;  2EN5 A;  3TIX B;  2E4N A;  2P6I A;  3NEI A;  2EHC A;  4MUY A;  2EJK A;  2P5F A;  4MV0 A;  3KE9 A;  4MV5 A;  2PCM A;  2EL2 A;  2ELE A;  2ED3 A;  2DV4 A;  4MUX A;  3UTD A;  2EMU A;  1CBF A;  2KYY A;  3KEF A;  1PJS A;  2EGB A;  3FFY A;  2P6K A;  2ENI A;  3KEL A;  3ZGN A;  3UV7 A;  3HH1 A;  2OWU A;  1V9A A;  1WYZ A;  2OWF A;  4H4E A;  3KEM A;  1WDE A;  3UWM A;  2EKA A;  2E4R A;  2E8Q A;  2E8R A;  3KWP A;  1S4D A;  2EL0 A;  1VA0 A;  2E0N A;  2E07 A;  2QBU A;  1PJQ A;  3ZGL A;  4EB3 A;  2EHL A;  1VE2 A;  2HUQ A;  3UV3 A;  2OWK A;  2HUV A;  2EK4 A;  2EK3 A;  2EGL A;  2OWG A;  3SZL A;  2E7R A;  2DSG A;  2PB6 A;  3T0G A;  2E8S A;  3UV6 A;  4N7B A;  3T0F A;  3DNF A;  2EH2 A;  1VHV A;  2DV5 A;  2EJJ A;  2E17 A;  3I4T A;  2PB4 A;  2OWV A;  2E0K A;  1WNG A;  2P6L A;  2ZVB A;  2EGS A;  2YBO A;  2CBF A;  3ND1 A;  2PCH A;  5HW4 A;  2DXV A;  3KE8 A;  3URK A;  2ZVC A;  1VCE A;  2DXW A;  2DXX A;  2HR8 A;  3FQ6 A;  2PCI A;  2DEK A;  2PB5 A;  2EH4 A;  2HUX A;  2EJZ A;  2E15 A;  2E16 A;  2EMR A;  2EEQ A;  4H4D A;  2DSI A;  2DV7 A;  3NDC A;  1PJT A;  3UTC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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