2ENIA

Mutant f197m structure of ph0725 from pyrococcus horikoshii ot3
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
265
structure length
265
Chain Sequence
MVLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVMTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGAPREILRVNV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3
rcsb
source organism Pyrococcus horikoshii
molecule tags Transferase
molecule keywords diphthine synthase
total genus 79
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2eniA02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2eniA01
2HUTA 3NUTA 2E4RA 2PCMA 1VA0A 2HR8A 2OWFA 2NPNA 2DEKA 3NDCA 2P6LA 2PCIA 2DSGA 2CBFA 2EEQA 2EL1A 2E4NA 2E16A 2ENIA 2P6IA 2ELDA 3HH1A 2OWKA 2EMUA 2EK7A 2EMRA 2HUQA 2QBUA 2EN5A 1PJSA 2EK4A 1PJTA 2DV3A 1WDEA 2BB3A 2DV4A 2PB4A 2ZVCA 1WYZA 3ND1A 2PCAA 2E8RA 2E7RA 1PJQA 3NEIA 2PCKA 2HUXA 2EHLA 2EH5A 2DV5A 2E15A 2EK2A 3FQ6A 2YBQA 2E0NA 2P6DA 2OWVA 3KWPA 2EL3A 2EHCA 2EH4A 2E8QA 2DSHA 2ELEA 2E8SA 2ZVBA 2DXVA 2PB5A 2EJZA 2EK3A 1WNGA 1S4DA 2DSIA 2E07A 2OWUA 2PB6A 2OWGA 2ED5A 2HUVA 2DXWA 2P6KA 2E08A 2P5FA 2PCGA 2ED3A 2EH2A 2E8HA 2E0KA 1VCEA 3FFYA 2EGBA 1VE2A 1V9AA 2PCHA 1VHVA 2P5CA 2EJKA 2EGLA 1CBFA 3I4TA 2DXXA 2EGSA 2P9DA 4E16A 2EL0A 5HW4A 2EL2A 2E17A 2EKAA 2YBOA 2Z6RA 2EJJA 2DV7A 2P2XA
chains in the Genus database with same CATH superfamily
4EB3A 2HUTA 3NUTA 2E4RA 4MUYA 2PCMA 3SZLA 1VA0A 2HR8A 2OWFA 2NPNA 2DEKA 3NDCA 2P6LA 2PCIA 2DSGA 2CBFA 2EEQA 2EL1A 2E4NA 2E16A 2ENIA 2P6IA 3SZOA 2ELDA 3HH1A 2OWKA 2EMUA 2EK7A 2EMRA 2HUQA 2QBUA 2EN5A 4MV5A 4N7BA 3UTCA 3UWMA 1PJSA 2EK4A 1PJTA 2DV3A 1WDEA 2BB3A 2KYYA 2DV4A 4H4EA 3UV3A 4H4DA 2PB4A 3T0FA 2ZVCA 1WYZA 3ND1A 2PCAA 2E8RA 2E7RA 1PJQA 3NEIA 3KELA 4MV0A 2PCKA 2HUXA 3URKA 2EHLA 2EH5A 2DV5A 2E15A 2EK2A 3FQ6A 2YBQA 2E0NA 3UTDA 3UV7A 2P6DA 2OWVA 3KWPA 2EL3A 2EHCA 3TIXB 3KEFA 2EH4A 3KEMA 2E8QA 2DSHA 2ELEA 2E8SA 2ZVBA 2DXVA 2PB5A 2EJZA 2EK3A 1WNGA 1S4DA 3LMMA 4H4CA 2DSIA 2E07A 2OWUA 2PB6A 3DNFA 3UV6A 3SZUA 2OWGA 2ED5A 2HUVA 2DXWA 2P6KA 2E08A 2P5FA 2PCGA 2ED3A 2EH2A 2E8HA 2E0KA 1VCEA 3FFYA 2EGBA 1VE2A 1V9AA 2PCHA 4MUXA 3F7TA 1VHVA 2P5CA 3KE8A 2EJKA 3KE9A 2EGLA 1CBFA 3T0GA 3ZGLA 3I4TA 2DXXA 3ZGNA 2EGSA 2P9DA 4E16A 2EL0A 5HW4A 2EL2A 2E17A 2EKAA 2YBOA 2Z6RA 2EJJA 2DV7A 2P2XA
chains in the Genus database with same CATH topology
4EB3A 2HUTA 3NUTA 2E4RA 4MUYA 2PCMA 3SZLA 1VA0A 2HR8A 2OWFA 2NPNA 2DEKA 3NDCA 2P6LA 2PCIA 2DSGA 2CBFA 2EEQA 2EL1A 2E4NA 2E16A 2ENIA 2P6IA 3SZOA 2ELDA 3HH1A 2OWKA 2EMUA 2EK7A 2EMRA 2HUQA 2QBUA 2EN5A 4MV5A 4N7BA 3UTCA 3UWMA 1PJSA 2EK4A 1PJTA 2DV3A 1WDEA 2BB3A 2KYYA 2DV4A 4H4EA 3UV3A 4H4DA 2PB4A 3T0FA 2ZVCA 1WYZA 3ND1A 2PCAA 2E8RA 2E7RA 1PJQA 3NEIA 3KELA 4MV0A 2PCKA 2HUXA 3URKA 2EHLA 2EH5A 2DV5A 2E15A 2EK2A 3FQ6A 2YBQA 2E0NA 3UTDA 3UV7A 2P6DA 2OWVA 3KWPA 2EL3A 2EHCA 3TIXB 3KEFA 2EH4A 3KEMA 2E8QA 2DSHA 2ELEA 2E8SA 2ZVBA 2DXVA 2PB5A 2EJZA 2EK3A 1WNGA 1S4DA 3LMMA 4H4CA 2DSIA 2E07A 2OWUA 2PB6A 3DNFA 3UV6A 3SZUA 2OWGA 2ED5A 2HUVA 2DXWA 2P6KA 2E08A 2P5FA 2PCGA 2ED3A 2EH2A 2E8HA 2E0KA 1VCEA 3FFYA 2EGBA 1VE2A 1V9AA 2PCHA 4MUXA 3F7TA 1VHVA 2P5CA 3KE8A 2EJKA 3KE9A 2EGLA 1CBFA 3T0GA 3ZGLA 3I4TA 2DXXA 3ZGNA 2EGSA 2P9DA 4E16A 2EL0A 5HW4A 2EL2A 2E17A 2EKAA 2YBOA 2Z6RA 2EJJA 2DV7A 2P2XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2HUT A;  3NUT A;  2E4R A;  2PCM A;  1VA0 A;  2HR8 A;  2OWF A;  2NPN A;  2DEK A;  3NDC A;  2P6L A;  2PCI A;  2DSG A;  2CBF A;  2EEQ A;  2EL1 A;  2E4N A;  2E16 A;  2ENI A;  2P6I A;  2ELD A;  3HH1 A;  2OWK A;  2EMU A;  2EK7 A;  2EMR A;  2HUQ A;  2QBU A;  2EN5 A;  1PJS A;  2EK4 A;  1PJT A;  2DV3 A;  1WDE A;  2BB3 A;  2DV4 A;  2PB4 A;  2ZVC A;  1WYZ A;  3ND1 A;  2PCA A;  2E8R A;  2E7R A;  1PJQ A;  3NEI A;  2PCK A;  2HUX A;  2EHL A;  2EH5 A;  2DV5 A;  2E15 A;  2EK2 A;  3FQ6 A;  2YBQ A;  2E0N A;  2P6D A;  2OWV A;  3KWP A;  2EL3 A;  2EHC A;  2EH4 A;  2E8Q A;  2DSH A;  2ELE A;  2E8S A;  2ZVB A;  2DXV A;  2PB5 A;  2EJZ A;  2EK3 A;  1WNG A;  1S4D A;  2DSI A;  2E07 A;  2OWU A;  2PB6 A;  2OWG A;  2ED5 A;  2HUV A;  2DXW A;  2P6K A;  2E08 A;  2P5F A;  2PCG A;  2ED3 A;  2EH2 A;  2E8H A;  2E0K A;  1VCE A;  3FFY A;  2EGB A;  1VE2 A;  1V9A A;  2PCH A;  1VHV A;  2P5C A;  2EJK A;  2EGL A;  1CBF A;  3I4T A;  2DXX A;  2EGS A;  2P9D A;  4E16 A;  2EL0 A;  5HW4 A;  2EL2 A;  2E17 A;  2EKA A;  2YBO A;  2Z6R A;  2EJJ A;  2DV7 A;  2P2X A; 
#chains in the Genus database with same CATH topology
 4EB3 A;  2HUT A;  3NUT A;  2E4R A;  4MUY A;  2PCM A;  3SZL A;  1VA0 A;  2HR8 A;  2OWF A;  2NPN A;  2DEK A;  3NDC A;  2P6L A;  2PCI A;  2DSG A;  2CBF A;  2EEQ A;  2EL1 A;  2E4N A;  2E16 A;  2ENI A;  2P6I A;  3SZO A;  2ELD A;  3HH1 A;  2OWK A;  2EMU A;  2EK7 A;  2EMR A;  2HUQ A;  2QBU A;  2EN5 A;  4MV5 A;  4N7B A;  3UTC A;  3UWM A;  1PJS A;  2EK4 A;  1PJT A;  2DV3 A;  1WDE A;  2BB3 A;  2KYY A;  2DV4 A;  4H4E A;  3UV3 A;  4H4D A;  2PB4 A;  3T0F A;  2ZVC A;  1WYZ A;  3ND1 A;  2PCA A;  2E8R A;  2E7R A;  1PJQ A;  3NEI A;  3KEL A;  4MV0 A;  2PCK A;  2HUX A;  3URK A;  2EHL A;  2EH5 A;  2DV5 A;  2E15 A;  2EK2 A;  3FQ6 A;  2YBQ A;  2E0N A;  3UTD A;  3UV7 A;  2P6D A;  2OWV A;  3KWP A;  2EL3 A;  2EHC A;  3TIX B;  3KEF A;  2EH4 A;  3KEM A;  2E8Q A;  2DSH A;  2ELE A;  2E8S A;  2ZVB A;  2DXV A;  2PB5 A;  2EJZ A;  2EK3 A;  1WNG A;  1S4D A;  3LMM A;  4H4C A;  2DSI A;  2E07 A;  2OWU A;  2PB6 A;  3DNF A;  3UV6 A;  3SZU A;  2OWG A;  2ED5 A;  2HUV A;  2DXW A;  2P6K A;  2E08 A;  2P5F A;  2PCG A;  2ED3 A;  2EH2 A;  2E8H A;  2E0K A;  1VCE A;  3FFY A;  2EGB A;  1VE2 A;  1V9A A;  2PCH A;  4MUX A;  3F7T A;  1VHV A;  2P5C A;  3KE8 A;  2EJK A;  3KE9 A;  2EGL A;  1CBF A;  3T0G A;  3ZGL A;  3I4T A;  2DXX A;  3ZGN A;  2EGS A;  2P9D A;  4E16 A;  2EL0 A;  5HW4 A;  2EL2 A;  2E17 A;  2EKA A;  2YBO A;  2Z6R A;  2EJJ A;  2DV7 A;  2P2X A; 
#chains in the Genus database with same CATH homology
 4EB3 A;  2HUT A;  3NUT A;  2E4R A;  4MUY A;  2PCM A;  3SZL A;  1VA0 A;  2HR8 A;  2OWF A;  2NPN A;  2DEK A;  3NDC A;  2P6L A;  2PCI A;  2DSG A;  2CBF A;  2EEQ A;  2EL1 A;  2E4N A;  2E16 A;  2ENI A;  2P6I A;  3SZO A;  2ELD A;  3HH1 A;  2OWK A;  2EMU A;  2EK7 A;  2EMR A;  2HUQ A;  2QBU A;  2EN5 A;  4MV5 A;  4N7B A;  3UTC A;  3UWM A;  1PJS A;  2EK4 A;  1PJT A;  2DV3 A;  1WDE A;  2BB3 A;  2KYY A;  2DV4 A;  4H4E A;  3UV3 A;  4H4D A;  2PB4 A;  3T0F A;  2ZVC A;  1WYZ A;  3ND1 A;  2PCA A;  2E8R A;  2E7R A;  1PJQ A;  3NEI A;  3KEL A;  4MV0 A;  2PCK A;  2HUX A;  3URK A;  2EHL A;  2EH5 A;  2DV5 A;  2E15 A;  2EK2 A;  3FQ6 A;  2YBQ A;  2E0N A;  3UTD A;  3UV7 A;  2P6D A;  2OWV A;  3KWP A;  2EL3 A;  2EHC A;  3TIX B;  3KEF A;  2EH4 A;  3KEM A;  2E8Q A;  2DSH A;  2ELE A;  2E8S A;  2ZVB A;  2DXV A;  2PB5 A;  2EJZ A;  2EK3 A;  1WNG A;  1S4D A;  3LMM A;  4H4C A;  2DSI A;  2E07 A;  2OWU A;  2PB6 A;  3DNF A;  3UV6 A;  3SZU A;  2OWG A;  2ED5 A;  2HUV A;  2DXW A;  2P6K A;  2E08 A;  2P5F A;  2PCG A;  2ED3 A;  2EH2 A;  2E8H A;  2E0K A;  1VCE A;  3FFY A;  2EGB A;  1VE2 A;  1V9A A;  2PCH A;  4MUX A;  3F7T A;  1VHV A;  2P5C A;  3KE8 A;  2EJK A;  3KE9 A;  2EGL A;  1CBF A;  3T0G A;  3ZGL A;  3I4T A;  2DXX A;  3ZGN A;  2EGS A;  2P9D A;  4E16 A;  2EL0 A;  5HW4 A;  2EL2 A;  2E17 A;  2EKA A;  2YBO A;  2Z6R A;  2EJJ A;  2DV7 A;  2P2X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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