2FJ8A

High resolution structure of barley bowman-birk inhibitor
Total Genus 14
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
120
structure length
120
Chain Sequence
KRPWKCCDEAVCTRSIPPICTCMDEVFECPKTCKSCGPSMGDPSRRICQDQYVGDPGPICRPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSRSRPSRRVCIDSYFGPVPPRCT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase inhibitor
molecule keywords Bowman-Birk type trypsin inhibitor
publication title High resolution structure of barley Bowman-Birk inhibitor
rcsb
total genus 14
structure length 120
sequence length 120
ec nomenclature
pdb deposition date 2006-01-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00228 Bowman-Birk_leg Bowman-Birk serine protease inhibitor family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.69.10 Mainly Beta Ribbon Cysteine Protease (Bromelain) Inhibitor, subunit H Cysteine Protease (Bromelain) Inhibitor, subunit H 2fj8A01
2.10.69.10 Mainly Beta Ribbon Cysteine Protease (Bromelain) Inhibitor, subunit H Cysteine Protease (Bromelain) Inhibitor, subunit H 2fj8A02
1TX6I 2BBIA 2ILNI 2FJ8A 3MYWI 1PBIA 1MVZA 3RU4B 2QN5B 2R33A 5J4QB 1BBIA 1H34A 5J4SB 2BI6H 1K9BA 1D6RI 2G81I 1BI6H 2AIHA 1PI2A 1C2AA
chains in the Genus database with same CATH superfamily
1TX6I 2BBIA 2ILNI 2FJ8A 3MYWI 1PBIA 1MVZA 3RU4B 2QN5B 2R33A 5J4QB 1BBIA 1H34A 5J4SB 2BI6H 1K9BA 1D6RI 2G81I 1BI6H 2AIHA 1PI2A 1C2AA
chains in the Genus database with same CATH topology
1TX6I 2BBIA 2ILNI 2FJ8A 3MYWI 1PBIA 1MVZA 3RU4B 2QN5B 2R33A 5J4QB 1BBIA 1H34A 5J4SB 2BI6H 1K9BA 1D6RI 2G81I 1BI6H 2AIHA 1PI2A 1C2AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TX6 I;  2BBI A;  2ILN I;  2FJ8 A;  3MYW I;  1PBI A;  1MVZ A;  3RU4 B;  2QN5 B;  2R33 A;  5J4Q B;  1BBI A;  1H34 A;  5J4S B;  2BI6 H;  1K9B A;  1D6R I;  2G81 I;  1BI6 H;  2AIH A;  1PI2 A;  1C2A A; 
#chains in the Genus database with same CATH topology
 1TX6 I;  2BBI A;  2ILN I;  2FJ8 A;  3MYW I;  1PBI A;  1MVZ A;  3RU4 B;  2QN5 B;  2R33 A;  5J4Q B;  1BBI A;  1H34 A;  5J4S B;  2BI6 H;  1K9B A;  1D6R I;  2G81 I;  1BI6 H;  2AIH A;  1PI2 A;  1C2A A; 
#chains in the Genus database with same CATH homology
 1TX6 I;  2BBI A;  2ILN I;  2FJ8 A;  3MYW I;  1PBI A;  1MVZ A;  3RU4 B;  2QN5 B;  2R33 A;  5J4Q B;  1BBI A;  1H34 A;  5J4S B;  2BI6 H;  1K9B A;  1D6R I;  2G81 I;  1BI6 H;  2AIH A;  1PI2 A;  1C2A A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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