2FN0A

Crystal structure of yersinia enterocolitica salicylate synthase (irp9)
Total Genus 142
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
142
sequence length
433
structure length
408
Chain Sequence
KISEFLHEEQWLPTISGVLRQFAEEECYVYERPPCWYLGKGCQARLHINADGTQATFIDDAGEQKWAVDSIADCARRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLTLTVPREELIFEKGNVTVYADAPLAVDTALNGEAYKQQVARAVAEIRRGEYVKVIVSRAIPLPSRIDMPATLLYGRQANTPVRSFMFRQEGREALGFSPELVMSVTGNKVVTEPLAGTRDRMGNPEHNKAKEAELLHDSKEVLEHILSVKEAIAELEAVCLPGSVVVEDLMSVRQRGSVQHLGSGVSGQLAENKDAWDAFTVLFPSITASGIPKNAALNAIMQIEKTPRELYSGAILLLDDTRFDAALVLRSVFQDSQRCWIQAGAGIIAQSTPERELTETREKLASIAPYLMV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of Yersinia enterocolitica Salicylate Synthase and its Complex with the Reaction Products Salicylate and Pyruvate.
pubmed doi rcsb
molecule tags Transcription
source organism Yersinia enterocolitica
molecule keywords salicylate synthetase, Irp9
total genus 142
structure length 408
sequence length 433
chains with identical sequence B
ec nomenclature
pdb deposition date 2006-01-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00425 Chorismate_bind chorismate binding enzyme
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.120.10 Alpha Beta 4-Layer Sandwich Anthranilate synthase Anthranilate synthase 2fn0A00
3OS6A 3RV9A 2FN1A 3LOGA 2I6YA 5CWAA 3VEHA 5JY4A 3RV7A 3RV8A 3H9MA 3BZMA 3HWOA 2EUAA 5JZDA 3R74A 2G5FA 3GSEA 3ST6A 3BZNA 5JXZA 5KCKA 3R75A 1QDLA 3RV6A 1I7QA 1K0EA 1K0GA 5JY9A 3R76A 5JY8A 1I7SA 4GRHA 5JY4B 2FN0A 1I1QA
chains in the Genus database with same CATH superfamily
3OS6A 3RV9A 2FN1A 3LOGA 2I6YA 5CWAA 3VEHA 5JY4A 3RV7A 3RV8A 3H9MA 3BZMA 3HWOA 2EUAA 5JZDA 3R74A 2G5FA 3GSEA 3ST6A 3BZNA 5JXZA 5KCKA 3R75A 1QDLA 3RV6A 1I7QA 1K0EA 1K0GA 5JY9A 3R76A 5JY8A 1I7SA 4GRHA 5JY4B 2FN0A 1I1QA
chains in the Genus database with same CATH topology
3OS6A 3RV9A 2FN1A 3LOGA 2I6YA 5CWAA 3VEHA 5JY4A 3RV7A 3RV8A 3H9MA 3BZMA 3HWOA 2EUAA 5JZDA 3R74A 2G5FA 3GSEA 3ST6A 3BZNA 5JXZA 5KCKA 3R75A 1QDLA 3RV6A 1I7QA 1K0EA 1K0GA 5JY9A 3R76A 5JY8A 1I7SA 4GRHA 5JY4B 2FN0A 1I1QA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OS6 A;  3RV9 A;  2FN1 A;  3LOG A;  2I6Y A;  5CWA A;  3VEH A;  5JY4 A;  3RV7 A;  3RV8 A;  3H9M A;  3BZM A;  3HWO A;  2EUA A;  5JZD A;  3R74 A;  2G5F A;  3GSE A;  3ST6 A;  3BZN A;  5JXZ A;  5KCK A;  3R75 A;  1QDL A;  3RV6 A;  1I7Q A;  1K0E A;  1K0G A;  5JY9 A;  3R76 A;  5JY8 A;  1I7S A;  4GRH A;  5JY4 B;  2FN0 A;  1I1Q A; 
#chains in the Genus database with same CATH topology
 3OS6 A;  3RV9 A;  2FN1 A;  3LOG A;  2I6Y A;  5CWA A;  3VEH A;  5JY4 A;  3RV7 A;  3RV8 A;  3H9M A;  3BZM A;  3HWO A;  2EUA A;  5JZD A;  3R74 A;  2G5F A;  3GSE A;  3ST6 A;  3BZN A;  5JXZ A;  5KCK A;  3R75 A;  1QDL A;  3RV6 A;  1I7Q A;  1K0E A;  1K0G A;  5JY9 A;  3R76 A;  5JY8 A;  1I7S A;  4GRH A;  5JY4 B;  2FN0 A;  1I1Q A; 
#chains in the Genus database with same CATH homology
 3OS6 A;  3RV9 A;  2FN1 A;  3LOG A;  2I6Y A;  5CWA A;  3VEH A;  5JY4 A;  3RV7 A;  3RV8 A;  3H9M A;  3BZM A;  3HWO A;  2EUA A;  5JZD A;  3R74 A;  2G5F A;  3GSE A;  3ST6 A;  3BZN A;  5JXZ A;  5KCK A;  3R75 A;  1QDL A;  3RV6 A;  1I7Q A;  1K0E A;  1K0G A;  5JY9 A;  3R76 A;  5JY8 A;  1I7S A;  4GRH A;  5JY4 B;  2FN0 A;  1I1Q A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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