2FVFA

Structure of 10:0-acp (protein with docked fatty acid)
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
82
structure length
82
Chain Sequence
AKKETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLLEKKA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Acyl Carrier Protein
publication title Solution structures of spinach acyl carrier protein with decanoate and stearate
pubmed doi rcsb
source organism Spinacia oleracea
total genus 21
structure length 82
sequence length 82
ec nomenclature
pdb deposition date 2006-01-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2fvfA00
4MRTC 2N5IA 1HY8A 4R0MA 2KG9A 5EJDA 1DNYA 2KG6A 2KGAA 2FVFA 2JU1A 1X3OA 2LOLA 4BPGA 2KOPA 2PNGA 5CZDB 2N5HA 2K0XA 2QNWA 2CQ8A 2N6YA 5HVCA 2AF8A 2LIWA 1HQBA 2N98A 2DNWA 1F80D 2CG5B 1OR5A 5KP8B 2MD9A 2FQ0A 2K92A 2K93A 2KORA 2X2BA 2GDWA 2GDYA 1AF8A 2FVAA 2KGCA 2KG8A 4DG9A 1DV5A 2K0YA 4H2WC 2GDXA 3CE7A 2JGPA 2LMLA 4HKGA 2MVVA 2MF4A 4NEOA 1VKUA 3EJEA 2MY5A 2VSQA 1L0IA 2FAEA 2MR8A 4PXHB 5KP7B 2FHSC 2FQ2A 3EJBA 3RG2A 2KOOA 2FVEA 2L9FA 2FADA 2KOSA 2KOQA 2EHSA 2M5RA 4H2XC 4BPHA 1T8KA 1NQ4A 2L22A 1KLPA 2KWLA 2K2QA 2KGEA 2LKIA 2EHTA 5HV8A 2MR7A 2JQ4A 3GZMA 2XZ1C 2FQ1A 4IZ6A 1L0HA 2MVUA 2L0QA 2LL8A 2LPKA 3NY7B 2CGQA 4CA3A 3GZLA 2AFDA 3EJDA 2KW2A 2N50A 2LTEA 1ACPA 4PWVB 2N6ZA 4BPFA 2AFEA 2KGDA 2FACA 2CNRA 2ROQA 2XZ0D 2KR5A 2AVAA 2K94A 4H2YC 5KP6B 2JU2A 2L4BA 2LIUA 3LMOA
chains in the Genus database with same CATH superfamily
2PEQA 2E1MA 2N5IA 1VQ4P 1VQ8P 1M74A 3E2DA 4U0AA 2QEXP 2FVFA 1A8OA 2JU1A 2KOPA 1K8AQ 1FR2A 2CQ8A 3CC4P 3CCVP 1OR5A 2BUOA 5KP8B 1NJIQ 2FQ0A 2KORA 4U0CA 2FVAA 4DG9A 1GPJA 3CE7A 2M8LA 5HGOA 4NEOA 2DGYA 2OTLP 5BS1A 3CC7P 2FAEA 5KP7B 2FHSC 2PEKA 1YJNP 3MGEA 4F37A 4H2XC 2Z46A 2GZGA 1VQMP 1KC8Q 2VLQA 1VQKP 4WYMA 2LKIA 3GJNA 3B4QA 2EHTA 3G28A 3GZMA 3G26A 2MVUA 2LPKA 3CCEP 2JYLA 4U0BA 2EIAA 1QVGO 1K73Q 3DTJA 3OW2O 1ACPA 5HGNA 1VQNP 1VHNA 2KGDA 2FACA 2CNRA 2K94A 2Z45A 4XFXA 3DS1A 5KP6B 2PENA 2JO0A 2L4BA 3LMOA 1N8RQ 1Q7YQ 3G6EP 4R0MA 2KG9A 3NTEA 1MZ8A 5EJDA 4U0DA 1UJZA 2PNGA 5CZDB 2N5HA 3CC2P 1HQBA 2N98A 2PY8A 2NO8A 1F80D 3CXCO 2WPTA 2K92A 3G4SP 1AF8A 2XXMA 1RO0A 2Z44A 2PEMA 2LMLA 4HKGA 2MVVA 3H0DA 3CPWO 2QA4P 1VKUA 2GZJA 2GZIA 2MY5A 2VSQA 3CMAP 1M1KQ 1YJ9P 1K9MQ 3EJBA 2VLPA 2KOOA 2VLOA 1EOQA 2FVEA 1GXHA 2L9FA 2OARA 4PH1A 3I55P 2EHSA 2M5RA 1T8KA 2ERHA 1EIAA 2K2QA 1UNKA 1RNIA 4GR6A 1EMVA 2MR7A 2XZ1C 1Q82Q 1CEIA 1JJ2O 2L0QA 3G71P 2OTJP 3HYBA 1S72P 3GZLA 5F2KA 2PEJA 2EG5A 2LTEA 4PWVB 5F2NA 3CCSP 3CMEP 1VQOP 3DS0A 1IMQA 1VQPP 2AVAA 3G21A 1ZMBA 3CCRP 1KD1Q 1E6JP 1DNYA 2CWOA 2KG6A 2KGAA 4XFZA 4U0FA 2XV6A 1X3OA 3H47A 2GYKA 1M90Q 3DPHA 1D1DA 2N6YA 3CCJP 2P9XA 2AF8A 4XFYA 4PH0A 3DS5A 1VQ7P 2CG5B 3VRLC 1W2BO 2MD9A 5F2OA 2K93A 2X2BA 2GDWA 4QKOA 2GDYA 3B5IA 1VQ6P 2KG8A 2K0DX 3CCMP 1DV5A 3P05A 4H2WC 2JGPA 4COPA 1YI2P 3DS4A 3CCUP 3H4EA 1KQSO 4PXHB 1ZNVA 1AYIA 2PEOA 1YIJP 4XRQA 2FQ2A 2XT1A 2KOSA 2PEIA 4BPHA 2L22A 1NQ4A 1KLPA 2KWLA 2KGEA 3G0VA 2KODA 1Z6MA 5HV8A 2JQ4A 3DS2A 4U0EA 2FQ1A 4IZ6A 2LL8A 1GXGA 1AUMA 4CA3A 2K5XA 5JPAA 3CCQP 2N50A 2JB0A 1BAJA 4BPFA 1K30A 2XZ0D 2ROQA 2ONTA 2KR5A 3G1GA 3WBHA 2LIUA 3G1IA 4MRTC 3LRYA 1HY8A 4M0IA 3I56P 4XROA 3GKLC 2BHVA 3CD6P 2VLNA 2LOLA 4BPGA 2JBGA 5EW5E 2QNWA 2K0XA 2GZFA 5HVCA 3U43A 4GR2A 2LIWA 2DNWA 2EFJA 2JYGA 2KGCA 5DCKA 5I4TG 1M6NA 2K0YA 2GDXA 2MF4A 2M8NA 3EJEA 1L0IA 1VQLP 2MR8A 3HZQA 2M8PA 2LF4A 3RG2A 2JAZA 1IUQA 1YJWP 1A43A 2FADA 2KOQA 3Q20A 3RG6C 1BXIA 1VQ5P 2L6EA 4IPYA 1IMPA 1YHQP 4COCA 4UHPB 5HGMA 3G29A 1L0HA 1QVFO 3DS3A 1VQ9P 3NY7B 2GZEA 2CGQA 2AFDA 5BS2A 1Q86Q 1E0HA 1QRJA 3EJDA 2KW2A 3M1MA 3CCLP 2N6ZA 1M6EX 2AFEA 1Q81Q 4H2YC 1RO2A 4QNBA 2JU2A 5HGLA 1YITP 7CEIA
chains in the Genus database with same CATH topology
4MRTC 2N5IA 1HY8A 4R0MA 2KG9A 5EJDA 1DNYA 2KG6A 2KGAA 2FVFA 2JU1A 1X3OA 2LOLA 4BPGA 2KOPA 2PNGA 5CZDB 2N5HA 2K0XA 2QNWA 2CQ8A 2N6YA 5HVCA 2AF8A 2LIWA 1HQBA 2N98A 2DNWA 1F80D 2CG5B 1OR5A 5KP8B 2MD9A 2FQ0A 2K92A 2K93A 2KORA 2X2BA 2GDWA 2GDYA 1AF8A 2FVAA 2KGCA 2KG8A 4DG9A 1DV5A 2K0YA 4H2WC 2GDXA 3CE7A 2JGPA 2LMLA 4HKGA 2MVVA 2MF4A 4NEOA 1VKUA 3EJEA 2MY5A 2VSQA 1L0IA 2FAEA 2MR8A 4PXHB 5KP7B 2FHSC 2FQ2A 3EJBA 3RG2A 2KOOA 2FVEA 2L9FA 2FADA 2KOSA 2KOQA 2EHSA 2M5RA 4H2XC 4BPHA 1T8KA 1NQ4A 2L22A 1KLPA 2KWLA 2K2QA 2KGEA 2LKIA 2EHTA 5HV8A 2MR7A 2JQ4A 3GZMA 2XZ1C 2FQ1A 4IZ6A 1L0HA 2MVUA 2L0QA 2LL8A 2LPKA 3NY7B 2CGQA 4CA3A 3GZLA 2AFDA 3EJDA 2KW2A 2N50A 2LTEA 1ACPA 4PWVB 2N6ZA 4BPFA 2AFEA 2KGDA 2FACA 2CNRA 2ROQA 2XZ0D 2KR5A 2AVAA 2K94A 4H2YC 5KP6B 2JU2A 2L4BA 2LIUA 3LMOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4MRT C;  2N5I A;  1HY8 A;  4R0M A;  2KG9 A;  5EJD A;  1DNY A;  2KG6 A;  2KGA A;  2FVF A;  2JU1 A;  1X3O A;  2LOL A;  4BPG A;  2KOP A;  2PNG A;  5CZD B;  2N5H A;  2K0X A;  2QNW A;  2CQ8 A;  2N6Y A;  5HVC A;  2AF8 A;  2LIW A;  1HQB A;  2N98 A;  2DNW A;  1F80 D;  2CG5 B;  1OR5 A;  5KP8 B;  2MD9 A;  2FQ0 A;  2K92 A;  2K93 A;  2KOR A;  2X2B A;  2GDW A;  2GDY A;  1AF8 A;  2FVA A;  2KGC A;  2KG8 A;  4DG9 A;  1DV5 A;  2K0Y A;  4H2W C;  2GDX A;  3CE7 A;  2JGP A;  2LML A;  4HKG A;  2MVV A;  2MF4 A;  4NEO A;  1VKU A;  3EJE A;  2MY5 A;  2VSQ A;  1L0I A;  2FAE A;  2MR8 A;  4PXH B;  5KP7 B;  2FHS C;  2FQ2 A;  3EJB A;  3RG2 A;  2KOO A;  2FVE A;  2L9F A;  2FAD A;  2KOS A;  2KOQ A;  2EHS A;  2M5R A;  4H2X C;  4BPH A;  1T8K A;  1NQ4 A;  2L22 A;  1KLP A;  2KWL A;  2K2Q A;  2KGE A;  2LKI A;  2EHT A;  5HV8 A;  2MR7 A;  2JQ4 A;  3GZM A;  2XZ1 C;  2FQ1 A;  4IZ6 A;  1L0H A;  2MVU A;  2L0Q A;  2LL8 A;  2LPK A;  3NY7 B;  2CGQ A;  4CA3 A;  3GZL A;  2AFD A;  3EJD A;  2KW2 A;  2N50 A;  2LTE A;  1ACP A;  4PWV B;  2N6Z A;  4BPF A;  2AFE A;  2KGD A;  2FAC A;  2CNR A;  2ROQ A;  2XZ0 D;  2KR5 A;  2AVA A;  2K94 A;  4H2Y C;  5KP6 B;  2JU2 A;  2L4B A;  2LIU A;  3LMO A; 
#chains in the Genus database with same CATH topology
 2PEQ A;  2E1M A;  2N5I A;  1VQ4 P;  1VQ8 P;  1M74 A;  3E2D A;  4U0A A;  2QEX P;  2FVF A;  1A8O A;  2JU1 A;  2KOP A;  1K8A Q;  1FR2 A;  2CQ8 A;  3CC4 P;  3CCV P;  1OR5 A;  2BUO A;  5KP8 B;  1NJI Q;  2FQ0 A;  2KOR A;  4U0C A;  2FVA A;  4DG9 A;  1GPJ A;  3CE7 A;  2M8L A;  5HGO A;  4NEO A;  2DGY A;  2OTL P;  5BS1 A;  3CC7 P;  2FAE A;  5KP7 B;  2FHS C;  2PEK A;  1YJN P;  3MGE A;  4F37 A;  4H2X C;  2Z46 A;  2GZG A;  1VQM P;  1KC8 Q;  2VLQ A;  1VQK P;  4WYM A;  2LKI A;  3GJN A;  3B4Q A;  2EHT A;  3G28 A;  3GZM A;  3G26 A;  2MVU A;  2LPK A;  3CCE P;  2JYL A;  4U0B A;  2EIA A;  1QVG O;  1K73 Q;  3DTJ A;  3OW2 O;  1ACP A;  5HGN A;  1VQN P;  1VHN A;  2KGD A;  2FAC A;  2CNR A;  2K94 A;  2Z45 A;  4XFX A;  3DS1 A;  5KP6 B;  2PEN A;  2JO0 A;  2L4B A;  3LMO A;  1N8R Q;  1Q7Y Q;  3G6E P;  4R0M A;  2KG9 A;  3NTE A;  1MZ8 A;  5EJD A;  4U0D A;  1UJZ A;  2PNG A;  5CZD B;  2N5H A;  3CC2 P;  1HQB A;  2N98 A;  2PY8 A;  2NO8 A;  1F80 D;  3CXC O;  2WPT A;  2K92 A;  3G4S P;  1AF8 A;  2XXM A;  1RO0 A;  2Z44 A;  2PEM A;  2LML A;  4HKG A;  2MVV A;  3H0D A;  3CPW O;  2QA4 P;  1VKU A;  2GZJ A;  2GZI A;  2MY5 A;  2VSQ A;  3CMA P;  1M1K Q;  1YJ9 P;  1K9M Q;  3EJB A;  2VLP A;  2KOO A;  2VLO A;  1EOQ A;  2FVE A;  1GXH A;  2L9F A;  2OAR A;  4PH1 A;  3I55 P;  2EHS A;  2M5R A;  1T8K A;  2ERH A;  1EIA A;  2K2Q A;  1UNK A;  1RNI A;  4GR6 A;  1EMV A;  2MR7 A;  2XZ1 C;  1Q82 Q;  1CEI A;  1JJ2 O;  2L0Q A;  3G71 P;  2OTJ P;  3HYB A;  1S72 P;  3GZL A;  5F2K A;  2PEJ A;  2EG5 A;  2LTE A;  4PWV B;  5F2N A;  3CCS P;  3CME P;  1VQO P;  3DS0 A;  1IMQ A;  1VQP P;  2AVA A;  3G21 A;  1ZMB A;  3CCR P;  1KD1 Q;  1E6J P;  1DNY A;  2CWO A;  2KG6 A;  2KGA A;  4XFZ A;  4U0F A;  2XV6 A;  1X3O A;  3H47 A;  2GYK A;  1M90 Q;  3DPH A;  1D1D A;  2N6Y A;  3CCJ P;  2P9X A;  2AF8 A;  4XFY A;  4PH0 A;  3DS5 A;  1VQ7 P;  2CG5 B;  3VRL C;  1W2B O;  2MD9 A;  5F2O A;  2K93 A;  2X2B A;  2GDW A;  4QKO A;  2GDY A;  3B5I A;  1VQ6 P;  2KG8 A;  2K0D X;  3CCM P;  1DV5 A;  3P05 A;  4H2W C;  2JGP A;  4COP A;  1YI2 P;  3DS4 A;  3CCU P;  3H4E A;  1KQS O;  4PXH B;  1ZNV A;  1AYI A;  2PEO A;  1YIJ P;  4XRQ A;  2FQ2 A;  2XT1 A;  2KOS A;  2PEI A;  4BPH A;  2L22 A;  1NQ4 A;  1KLP A;  2KWL A;  2KGE A;  3G0V A;  2KOD A;  1Z6M A;  5HV8 A;  2JQ4 A;  3DS2 A;  4U0E A;  2FQ1 A;  4IZ6 A;  2LL8 A;  1GXG A;  1AUM A;  4CA3 A;  2K5X A;  5JPA A;  3CCQ P;  2N50 A;  2JB0 A;  1BAJ A;  4BPF A;  1K30 A;  2XZ0 D;  2ROQ A;  2ONT A;  2KR5 A;  3G1G A;  3WBH A;  2LIU A;  3G1I A;  4MRT C;  3LRY A;  1HY8 A;  4M0I A;  3I56 P;  4XRO A;  3GKL C;  2BHV A;  3CD6 P;  2VLN A;  2LOL A;  4BPG A;  2JBG A;  5EW5 E;  2QNW A;  2K0X A;  2GZF A;  5HVC A;  3U43 A;  4GR2 A;  2LIW A;  2DNW A;  2EFJ A;  2JYG A;  2KGC A;  5DCK A;  5I4T G;  1M6N A;  2K0Y A;  2GDX A;  2MF4 A;  2M8N A;  3EJE A;  1L0I A;  1VQL P;  2MR8 A;  3HZQ A;  2M8P A;  2LF4 A;  3RG2 A;  2JAZ A;  1IUQ A;  1YJW P;  1A43 A;  2FAD A;  2KOQ A;  3Q20 A;  3RG6 C;  1BXI A;  1VQ5 P;  2L6E A;  4IPY A;  1IMP A;  1YHQ P;  4COC A;  4UHP B;  5HGM A;  3G29 A;  1L0H A;  1QVF O;  3DS3 A;  1VQ9 P;  3NY7 B;  2GZE A;  2CGQ A;  2AFD A;  5BS2 A;  1Q86 Q;  1E0H A;  1QRJ A;  3EJD A;  2KW2 A;  3M1M A;  3CCL P;  2N6Z A;  1M6E X;  2AFE A;  1Q81 Q;  4H2Y C;  1RO2 A;  4QNB A;  2JU2 A;  5HGL A;  1YIT P;  7CEI A; 
#chains in the Genus database with same CATH homology
 4MRT C;  2N5I A;  1HY8 A;  4R0M A;  2KG9 A;  5EJD A;  1DNY A;  2KG6 A;  2KGA A;  2FVF A;  2JU1 A;  1X3O A;  2LOL A;  4BPG A;  2KOP A;  2PNG A;  5CZD B;  2N5H A;  2K0X A;  2QNW A;  2CQ8 A;  2N6Y A;  5HVC A;  2AF8 A;  2LIW A;  1HQB A;  2N98 A;  2DNW A;  1F80 D;  2CG5 B;  1OR5 A;  5KP8 B;  2MD9 A;  2FQ0 A;  2K92 A;  2K93 A;  2KOR A;  2X2B A;  2GDW A;  2GDY A;  1AF8 A;  2FVA A;  2KGC A;  2KG8 A;  4DG9 A;  1DV5 A;  2K0Y A;  4H2W C;  2GDX A;  3CE7 A;  2JGP A;  2LML A;  4HKG A;  2MVV A;  2MF4 A;  4NEO A;  1VKU A;  3EJE A;  2MY5 A;  2VSQ A;  1L0I A;  2FAE A;  2MR8 A;  4PXH B;  5KP7 B;  2FHS C;  2FQ2 A;  3EJB A;  3RG2 A;  2KOO A;  2FVE A;  2L9F A;  2FAD A;  2KOS A;  2KOQ A;  2EHS A;  2M5R A;  4H2X C;  4BPH A;  1T8K A;  1NQ4 A;  2L22 A;  1KLP A;  2KWL A;  2K2Q A;  2KGE A;  2LKI A;  2EHT A;  5HV8 A;  2MR7 A;  2JQ4 A;  3GZM A;  2XZ1 C;  2FQ1 A;  4IZ6 A;  1L0H A;  2MVU A;  2L0Q A;  2LL8 A;  2LPK A;  3NY7 B;  2CGQ A;  4CA3 A;  3GZL A;  2AFD A;  3EJD A;  2KW2 A;  2N50 A;  2LTE A;  1ACP A;  4PWV B;  2N6Z A;  4BPF A;  2AFE A;  2KGD A;  2FAC A;  2CNR A;  2ROQ A;  2XZ0 D;  2KR5 A;  2AVA A;  2K94 A;  4H2Y C;  5KP6 B;  2JU2 A;  2L4B A;  2LIU A;  3LMO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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