2G03A

Structure of a putative cell filamentation protein from neisseria meningitidis.
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
177
structure length
177
Chain Sequence
MKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQIHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVEMNIAHPFLEGNGRSTRIWLDLVLKKNLKKVVNWQNVSKTLYLQAMERSPVNDLELRFLLKDNLTDDVDNREIIFKGIEQSYYYEG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of a putative cell filamentation protein from Neisseria meningitidis.
rcsb
source organism Neisseria meningitidis
molecule tags Structural genomics, unknown function
molecule keywords hypothetical protein NMA0004
total genus 63
structure length 177
sequence length 177
ec nomenclature ec 2.7.7.n1: Protein adenylyltransferase.
pdb deposition date 2006-02-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02661 Fic Fic/DOC family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3290.10 Mainly Alpha Orthogonal Bundle Fic-like fold Fido-like domain 2g03A00
5JFFA 4PY3A 4WGJA 5JJ7A 3ZLMA 2F6SA 4U04A 4N67A 4U07A 2G03A 5EU0A 4M16A 3S6AA 2VZAA 4X2CA 5JFZA 3SHGA 5CMTA 3ZCBA 4U0SA 4ITRA 3N3UA 4LU4A 3LETA 2VY3A 3SE5A 4X2EA 3SN9A 3CUCA 4U0ZA 4NPSA 4XI8A 2JK8A 5JJ6A 5CGLA 4X2DA 3ZC7A 5CKLA 4U0UA
chains in the Genus database with same CATH superfamily
5JFFA 4PY3A 1NH1A 4WGJA 5JJ7A 3ZLMA 2F6SA 2NUDA 4U04A 4N67A 4U07A 2G03A 5EU0A 4M16A 3S6AA 2NUNA 2VZAA 4X2CA 5JFZA 3SHGA 5CMTA 3ZCBA 4ITRA 3N3UA 4U0SA 4LU4A 3LETA 2VY3A 3SE5A 4X2EA 3SN9A 3CUCA 4U0ZA 4NPSA 4XI8A 2JK8A 5JJ6A 5CGLA 4X2DA 3ZC7A 5CKLA 4U0UA
chains in the Genus database with same CATH topology
5JFFA 4PY3A 4WGJA 5JJ7A 3ZLMA 2F6SA 4U04A 4N67A 4U07A 2G03A 5EU0A 4M16A 3S6AA 2VZAA 4X2CA 5JFZA 3SHGA 5CMTA 3ZCBA 4U0SA 4ITRA 3N3UA 4LU4A 3LETA 2VY3A 3SE5A 4X2EA 3SN9A 3CUCA 4U0ZA 4NPSA 4XI8A 2JK8A 5JJ6A 5CGLA 4X2DA 3ZC7A 5CKLA 4U0UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5JFF A;  4PY3 A;  4WGJ A;  5JJ7 A;  3ZLM A;  2F6S A;  4U04 A;  4N67 A;  4U07 A;  2G03 A;  5EU0 A;  4M16 A;  3S6A A;  2VZA A;  4X2C A;  5JFZ A;  3SHG A;  5CMT A;  3ZCB A;  4U0S A;  4ITR A;  3N3U A;  4LU4 A;  3LET A;  2VY3 A;  3SE5 A;  4X2E A;  3SN9 A;  3CUC A;  4U0Z A;  4NPS A;  4XI8 A;  2JK8 A;  5JJ6 A;  5CGL A;  4X2D A;  3ZC7 A;  5CKL A;  4U0U A; 
#chains in the Genus database with same CATH topology
 5JFF A;  4PY3 A;  1NH1 A;  4WGJ A;  5JJ7 A;  3ZLM A;  2F6S A;  2NUD A;  4U04 A;  4N67 A;  4U07 A;  2G03 A;  5EU0 A;  4M16 A;  3S6A A;  2NUN A;  2VZA A;  4X2C A;  5JFZ A;  3SHG A;  5CMT A;  3ZCB A;  4ITR A;  3N3U A;  4U0S A;  4LU4 A;  3LET A;  2VY3 A;  3SE5 A;  4X2E A;  3SN9 A;  3CUC A;  4U0Z A;  4NPS A;  4XI8 A;  2JK8 A;  5JJ6 A;  5CGL A;  4X2D A;  3ZC7 A;  5CKL A;  4U0U A; 
#chains in the Genus database with same CATH homology
 5JFF A;  4PY3 A;  4WGJ A;  5JJ7 A;  3ZLM A;  2F6S A;  4U04 A;  4N67 A;  4U07 A;  2G03 A;  5EU0 A;  4M16 A;  3S6A A;  2VZA A;  4X2C A;  5JFZ A;  3SHG A;  5CMT A;  3ZCB A;  4U0S A;  4ITR A;  3N3U A;  4LU4 A;  3LET A;  2VY3 A;  3SE5 A;  4X2E A;  3SN9 A;  3CUC A;  4U0Z A;  4NPS A;  4XI8 A;  2JK8 A;  5JJ6 A;  5CGL A;  4X2D A;  3ZC7 A;  5CKL A;  4U0U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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