2G4RA

Anomalous substructure of moga
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
153
structure length
153
Chain Sequence
TRSARIVVVSSRAAAGVYTDDCGPIIAGWLEQHGFSSVQPQVVADGNPVGEALHDAVNAGVDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGRTLIINLPGSPGGVRDGLGVLADVLDHALEQIAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths.
pubmed doi rcsb
molecule tags Biosynthetic protein
source organism Mycobacterium tuberculosis
molecule keywords molybdopterin biosynthesis Mog protein
total genus 48
structure length 153
sequence length 153
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2006-02-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 2g4rA00
4U91A 3PZYA 5G2RA 5ERQA 3TCRA 4LHBA 1DI6A 1Y5EA 2G2CA 2IS8A 2NQNA 1XI8A 4TK4A 1R2KA 4TWGA 1G8LA 3IWTA 2F7WA 4CTAB 1UUXA 4NWOA 1O8QA 5G2SA 1O8NA 4PD0A 5ERRA 3RFQA 4PD1A 1G8RA 1IHCA 1EAVA 1T3EA 5ERVA 1MKZA 2NROA 4CT8A 2NQMA 1FC5A 3OI9A 1UUYA 2FTSA 2G4RA 2NQUA 3K6AA 3KBQA 4CTAA 4TK3A 2PBQA 4UUWA 2NRPA 4UOCA 3MCIA 1O8OA 1JLJA 3MCJA 1DI7A 2NQQA 2QQ1A 2NQVA 4TK1A 5ERSA 5ERTA 2F7YA 2NQKA 2NQSA 3MCHA 1UZ5A 4UUXA 4CT9A 4XCWA 2NRSA 4U90A 2NQRA 1WU2A 5ERUA 2FU3A
chains in the Genus database with same CATH superfamily
5DMHA 1DI6A 2IS8A 1G8LA 2F7WA 1UUXA 1EAVA 3OI9A 1UUYA 2FTSA 4CTAA 3K6AA 4TK3A 2NRPA 3MCJA 5ERTA 5ERSA 2NQKA 2NRSA 4UUXA 4U91A 3PZYA 5ERQA 3TCRA 2NQNA 1XI8A 3IWTA 5G2SA 1IHCA 5ERVA 2NROA 4CT8A 1FC5A 4UOCA 3MCIA 1O8OA 4TK1A 2F7YA 3DQQA 4CT9A 4U90A 2FU3A 2G2CA 4TWGA 4NWOA 1O8QA 3RFQA 1G8RA 1T3EA 2G4RA 2NQUA 3KBQA 1DI7A 2NQVA 3MCHA 1UZ5A 2NQRA 5G2RA 4LHBA 1Y5EA 4TK4A 1R2KA 4CTAB 1O8NA 4PD0A 5ERRA 4PD1A 1MKZA 2NQMA 4UUWA 2PBQA 1JLJA 2NQQA 2QQ1A 1YZYA 2NQSA 4XCWA 1WU2A 5ERUA
chains in the Genus database with same CATH topology
4U91A 3PZYA 5G2RA 5ERQA 3TCRA 4LHBA 1DI6A 1Y5EA 2G2CA 2IS8A 2NQNA 1XI8A 4TK4A 1R2KA 4TWGA 1G8LA 3IWTA 2F7WA 4CTAB 1UUXA 4NWOA 1O8QA 5G2SA 1O8NA 4PD0A 5ERRA 3RFQA 4PD1A 1G8RA 1IHCA 1EAVA 1T3EA 5ERVA 1MKZA 2NROA 4CT8A 2NQMA 1FC5A 3OI9A 1UUYA 2FTSA 2G4RA 2NQUA 3K6AA 3KBQA 4CTAA 4TK3A 2PBQA 4UUWA 2NRPA 4UOCA 3MCIA 1O8OA 1JLJA 3MCJA 1DI7A 2NQQA 2QQ1A 2NQVA 4TK1A 5ERSA 5ERTA 2F7YA 2NQKA 2NQSA 3MCHA 1UZ5A 4UUXA 4CT9A 4XCWA 2NRSA 4U90A 2NQRA 1WU2A 5ERUA 2FU3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4U91 A;  3PZY A;  5G2R A;  5ERQ A;  3TCR A;  4LHB A;  1DI6 A;  1Y5E A;  2G2C A;  2IS8 A;  2NQN A;  1XI8 A;  4TK4 A;  1R2K A;  4TWG A;  1G8L A;  3IWT A;  2F7W A;  4CTA B;  1UUX A;  4NWO A;  1O8Q A;  5G2S A;  1O8N A;  4PD0 A;  5ERR A;  3RFQ A;  4PD1 A;  1G8R A;  1IHC A;  1EAV A;  1T3E A;  5ERV A;  1MKZ A;  2NRO A;  4CT8 A;  2NQM A;  1FC5 A;  3OI9 A;  1UUY A;  2FTS A;  2G4R A;  2NQU A;  3K6A A;  3KBQ A;  4CTA A;  4TK3 A;  2PBQ A;  4UUW A;  2NRP A;  4UOC A;  3MCI A;  1O8O A;  1JLJ A;  3MCJ A;  1DI7 A;  2NQQ A;  2QQ1 A;  2NQV A;  4TK1 A;  5ERS A;  5ERT A;  2F7Y A;  2NQK A;  2NQS A;  3MCH A;  1UZ5 A;  4UUX A;  4CT9 A;  4XCW A;  2NRS A;  4U90 A;  2NQR A;  1WU2 A;  5ERU A;  2FU3 A; 
#chains in the Genus database with same CATH topology
 5DMH A;  1DI6 A;  2IS8 A;  1G8L A;  2F7W A;  1UUX A;  1EAV A;  3OI9 A;  1UUY A;  2FTS A;  4CTA A;  3K6A A;  4TK3 A;  2NRP A;  3MCJ A;  5ERT A;  5ERS A;  2NQK A;  2NRS A;  4UUX A;  4U91 A;  3PZY A;  5ERQ A;  3TCR A;  2NQN A;  1XI8 A;  3IWT A;  5G2S A;  1IHC A;  5ERV A;  2NRO A;  4CT8 A;  1FC5 A;  4UOC A;  3MCI A;  1O8O A;  4TK1 A;  2F7Y A;  3DQQ A;  4CT9 A;  4U90 A;  2FU3 A;  2G2C A;  4TWG A;  4NWO A;  1O8Q A;  3RFQ A;  1G8R A;  1T3E A;  2G4R A;  2NQU A;  3KBQ A;  1DI7 A;  2NQV A;  3MCH A;  1UZ5 A;  2NQR A;  5G2R A;  4LHB A;  1Y5E A;  4TK4 A;  1R2K A;  4CTA B;  1O8N A;  4PD0 A;  5ERR A;  4PD1 A;  1MKZ A;  2NQM A;  4UUW A;  2PBQ A;  1JLJ A;  2NQQ A;  2QQ1 A;  1YZY A;  2NQS A;  4XCW A;  1WU2 A;  5ERU A; 
#chains in the Genus database with same CATH homology
 4U91 A;  3PZY A;  5G2R A;  5ERQ A;  3TCR A;  4LHB A;  1DI6 A;  1Y5E A;  2G2C A;  2IS8 A;  2NQN A;  1XI8 A;  4TK4 A;  1R2K A;  4TWG A;  1G8L A;  3IWT A;  2F7W A;  4CTA B;  1UUX A;  4NWO A;  1O8Q A;  5G2S A;  1O8N A;  4PD0 A;  5ERR A;  3RFQ A;  4PD1 A;  1G8R A;  1IHC A;  1EAV A;  1T3E A;  5ERV A;  1MKZ A;  2NRO A;  4CT8 A;  2NQM A;  1FC5 A;  3OI9 A;  1UUY A;  2FTS A;  2G4R A;  2NQU A;  3K6A A;  3KBQ A;  4CTA A;  4TK3 A;  2PBQ A;  4UUW A;  2NRP A;  4UOC A;  3MCI A;  1O8O A;  1JLJ A;  3MCJ A;  1DI7 A;  2NQQ A;  2QQ1 A;  2NQV A;  4TK1 A;  5ERS A;  5ERT A;  2F7Y A;  2NQK A;  2NQS A;  3MCH A;  1UZ5 A;  4UUX A;  4CT9 A;  4XCW A;  2NRS A;  4U90 A;  2NQR A;  1WU2 A;  5ERU A;  2FU3 A; 
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similar chains in the Genus database (?% sequence similarity)
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