2G7QA

Structure of the light chain of botulinum neurotoxin serotype a bound to small molecule inhibitors
Total Genus 131
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
417
structure length
411
Chain Sequence
MFVNKQFNYKDPVNGVDIAYIKIPNAGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHDVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAEHRLYGIAINPNRVFKVNTNAYYEGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDVASTLNKAKSIIGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVNFFKVINAKTFLNFDKAVFRINIVPDENYTIKDGFNLKGANLSTNFNGQNTEINSRNFTRLKN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Botulinum neurotoxin type A
publication title Light chain of botulinum neurotoxin serotype A: structural resolution of a catalytic intermediate.
pubmed doi rcsb
source organism Clostridium botulinum
total genus 131
structure length 411
sequence length 417
chains with identical sequence B
ec nomenclature ec 3.4.24.69: Bontoxilysin.
pdb deposition date 2006-02-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01742 Peptidase_M27 Clostridial neurotoxin zinc protease
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1240.10 Alpha Beta Alpha-Beta Complex Zincin-like Metalloproteases ("zincins"), catalytic domain like 2g7qA00
3FIEA 1ZB7A 4ZJXA 4EJ5A 1XTFA 1T3CA 1F31A 4ZKTB 3BWIA 1S0FA 3QW6A 1ZL6A 3QW7A 2NZ9A 2G7PA 5BQMA 2G7QA 1G9CA 1S0CA 4EL4A 1EPWA 1ZL5A 3QIXA 2A8AA 1E1HA 3FIIA 2IMBA 3DEBA 1ZKXA 2IMAA 1ZKWA 3FFZA 3V0BA 1S0GA 3DSEA 3NF3A 2A97A 3BOOA 4KS6A 1S0EA 3V0BB 3QIYA 2G7NA 2NYYA 3ZUSA 2ISGA 4HEVA 3K3QB 4KTXA 1G9DA 2ISEA 3QW5A 2ETFA 3QW8A 1YVGA 3V0AA 1S0DA 3VUOA 3BONA 1G9AA 5BQNA 1ZN3A 3ZURA 3D3XA 3QJ0A 2ILPA 1XTGA 3C88A 3BOKA 2W2DA 3ZUQA 3BTAA 3C8BA 1F82A 4J1LA 3QIZA 1G9BA 2FPQA 2IMCA 4KUFA 3DDBA 2NP0A 2XHLA 3C89A 1S0BA 2G7KA 2ISHA 3V0AB 1T3AA 1I1EA 2QN0A 4ELCA 3DS9A 1Z7HA 3DDAA 3C8AA
chains in the Genus database with same CATH superfamily
3FIEA 1ZB7A 4ZJXA 4EJ5A 1XTFA 2EJQA 1T3CA 1F31A 4ZKTB 3BWIA 1S0FA 4AW6A 3QW6A 1ZL6A 3QW7A 2NZ9A 2G7PA 5BQMA 2G7QA 4JIUA 1G9CA 1S0CA 4EL4A 1EPWA 1ZL5A 3QIXA 2A8AA 1E1HA 3FIIA 2IMBA 3DEBA 1ZKXA 2IMAA 1ZKWA 3FFZA 3V0BA 1S0GA 3DSEA 3NF3A 2A97A 3BOOA 4KS6A 1S0EA 3V0BB 3QIYA 2G7NA 2NYYA 3ZUSA 2ISGA 4HEVA 4IL3A 3K3QB 4KTXA 1G9DA 2ISEA 3QW5A 2ETFA 3QW8A 1YVGA 3V0AA 1S0DA 3VUOA 3BONA 1G9AA 5BQNA 1ZN3A 3ZURA 3D3XA 3QJ0A 2ILPA 1XTGA 3C88A 3CQBA 3BOKA 4JIXA 2W2DA 3ZUQA 3BTAA 3C8BA 1F82A 4J1LA 3QIZA 1G9BA 2FPQA 2IMCA 4KUFA 3DDBA 2YPTA 2NP0A 2XHLA 3C89A 1S0BA 2G7KA 2ISHA 3V0AB 1T3AA 1I1EA 2QN0A 4ELCA 3E11A 3DS9A 1Z7HA 3DDAA 4QHFA 3C8AA
chains in the Genus database with same CATH topology
3FIEA 1ZB7A 4ZJXA 4EJ5A 1XTFA 1T3CA 1F31A 4ZKTB 3BWIA 1S0FA 3QW6A 1ZL6A 3QW7A 2NZ9A 2G7PA 5BQMA 2G7QA 1G9CA 1S0CA 4EL4A 1EPWA 1ZL5A 3QIXA 2A8AA 1E1HA 3FIIA 2IMBA 3DEBA 1ZKXA 2IMAA 1ZKWA 3FFZA 3V0BA 1S0GA 3DSEA 3NF3A 2A97A 3BOOA 4KS6A 1S0EA 3V0BB 3QIYA 2G7NA 2NYYA 3ZUSA 2ISGA 4HEVA 3K3QB 4KTXA 1G9DA 2ISEA 3QW5A 2ETFA 3QW8A 1YVGA 3V0AA 1S0DA 3VUOA 3BONA 1G9AA 5BQNA 1ZN3A 3ZURA 3D3XA 3QJ0A 2ILPA 1XTGA 3C88A 3BOKA 2W2DA 3ZUQA 3BTAA 3C8BA 1F82A 4J1LA 3QIZA 1G9BA 2FPQA 2IMCA 4KUFA 3DDBA 2NP0A 2XHLA 3C89A 1S0BA 2G7KA 2ISHA 3V0AB 1T3AA 1I1EA 2QN0A 4ELCA 3DS9A 1Z7HA 3DDAA 3C8AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FIE A;  1ZB7 A;  4ZJX A;  4EJ5 A;  1XTF A;  1T3C A;  1F31 A;  4ZKT B;  3BWI A;  1S0F A;  3QW6 A;  1ZL6 A;  3QW7 A;  2NZ9 A;  2G7P A;  5BQM A;  2G7Q A;  1G9C A;  1S0C A;  4EL4 A;  1EPW A;  1ZL5 A;  3QIX A;  2A8A A;  1E1H A;  3FII A;  2IMB A;  3DEB A;  1ZKX A;  2IMA A;  1ZKW A;  3FFZ A;  3V0B A;  1S0G A;  3DSE A;  3NF3 A;  2A97 A;  3BOO A;  4KS6 A;  1S0E A;  3V0B B;  3QIY A;  2G7N A;  2NYY A;  3ZUS A;  2ISG A;  4HEV A;  3K3Q B;  4KTX A;  1G9D A;  2ISE A;  3QW5 A;  2ETF A;  3QW8 A;  1YVG A;  3V0A A;  1S0D A;  3VUO A;  3BON A;  1G9A A;  5BQN A;  1ZN3 A;  3ZUR A;  3D3X A;  3QJ0 A;  2ILP A;  1XTG A;  3C88 A;  3BOK A;  2W2D A;  3ZUQ A;  3BTA A;  3C8B A;  1F82 A;  4J1L A;  3QIZ A;  1G9B A;  2FPQ A;  2IMC A;  4KUF A;  3DDB A;  2NP0 A;  2XHL A;  3C89 A;  1S0B A;  2G7K A;  2ISH A;  3V0A B;  1T3A A;  1I1E A;  2QN0 A;  4ELC A;  3DS9 A;  1Z7H A;  3DDA A;  3C8A A; 
#chains in the Genus database with same CATH topology
 3FIE A;  1ZB7 A;  4ZJX A;  4EJ5 A;  1XTF A;  2EJQ A;  1T3C A;  1F31 A;  4ZKT B;  3BWI A;  1S0F A;  4AW6 A;  3QW6 A;  1ZL6 A;  3QW7 A;  2NZ9 A;  2G7P A;  5BQM A;  2G7Q A;  4JIU A;  1G9C A;  1S0C A;  4EL4 A;  1EPW A;  1ZL5 A;  3QIX A;  2A8A A;  1E1H A;  3FII A;  2IMB A;  3DEB A;  1ZKX A;  2IMA A;  1ZKW A;  3FFZ A;  3V0B A;  1S0G A;  3DSE A;  3NF3 A;  2A97 A;  3BOO A;  4KS6 A;  1S0E A;  3V0B B;  3QIY A;  2G7N A;  2NYY A;  3ZUS A;  2ISG A;  4HEV A;  4IL3 A;  3K3Q B;  4KTX A;  1G9D A;  2ISE A;  3QW5 A;  2ETF A;  3QW8 A;  1YVG A;  3V0A A;  1S0D A;  3VUO A;  3BON A;  1G9A A;  5BQN A;  1ZN3 A;  3ZUR A;  3D3X A;  3QJ0 A;  2ILP A;  1XTG A;  3C88 A;  3CQB A;  3BOK A;  4JIX A;  2W2D A;  3ZUQ A;  3BTA A;  3C8B A;  1F82 A;  4J1L A;  3QIZ A;  1G9B A;  2FPQ A;  2IMC A;  4KUF A;  3DDB A;  2YPT A;  2NP0 A;  2XHL A;  3C89 A;  1S0B A;  2G7K A;  2ISH A;  3V0A B;  1T3A A;  1I1E A;  2QN0 A;  4ELC A;  3E11 A;  3DS9 A;  1Z7H A;  3DDA A;  4QHF A;  3C8A A; 
#chains in the Genus database with same CATH homology
 3FIE A;  1ZB7 A;  4ZJX A;  4EJ5 A;  1XTF A;  1T3C A;  1F31 A;  4ZKT B;  3BWI A;  1S0F A;  3QW6 A;  1ZL6 A;  3QW7 A;  2NZ9 A;  2G7P A;  5BQM A;  2G7Q A;  1G9C A;  1S0C A;  4EL4 A;  1EPW A;  1ZL5 A;  3QIX A;  2A8A A;  1E1H A;  3FII A;  2IMB A;  3DEB A;  1ZKX A;  2IMA A;  1ZKW A;  3FFZ A;  3V0B A;  1S0G A;  3DSE A;  3NF3 A;  2A97 A;  3BOO A;  4KS6 A;  1S0E A;  3V0B B;  3QIY A;  2G7N A;  2NYY A;  3ZUS A;  2ISG A;  4HEV A;  3K3Q B;  4KTX A;  1G9D A;  2ISE A;  3QW5 A;  2ETF A;  3QW8 A;  1YVG A;  3V0A A;  1S0D A;  3VUO A;  3BON A;  1G9A A;  5BQN A;  1ZN3 A;  3ZUR A;  3D3X A;  3QJ0 A;  2ILP A;  1XTG A;  3C88 A;  3BOK A;  2W2D A;  3ZUQ A;  3BTA A;  3C8B A;  1F82 A;  4J1L A;  3QIZ A;  1G9B A;  2FPQ A;  2IMC A;  4KUF A;  3DDB A;  2NP0 A;  2XHL A;  3C89 A;  1S0B A;  2G7K A;  2ISH A;  3V0A B;  1T3A A;  1I1E A;  2QN0 A;  4ELC A;  3DS9 A;  1Z7H A;  3DDA A;  3C8A A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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