2GH0C

Growth factor/receptor complex
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
100
structure length
100
Chain Sequence
DPGCRLRSQLVPVRALGLGHRSDELVRFRFCSGSCRRARSPHDLSLASLLGAGALRPPPGSRPVSQPCCRPTRYEAVSFMDVNSTWRTVDRLSATACGCL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hormone/growth factor
molecule keywords artemin
publication title Structure of Artemin Complexed with Its Receptor GFRalpha3: Convergent Recognition of Glial Cell Line-Derived Neurotrophic Factors.
pubmed doi rcsb
source organism Homo sapiens
total genus 15
structure length 100
sequence length 100
chains with identical sequence D
ec nomenclature
pdb deposition date 2006-03-24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.90.10 Mainly Beta Ribbon Cystine Knot Cytokines, subunit B Cystine-knot cytokines 2gh0C00
5BQCA 4MPLA 2V5EB 5BQEB 1KLAA 4QHUC 4WPBA 4KZNA 1CZ8V 1TGJA 1HRPA 3QTKA 4HQXA 4X1JA 1NYSB 1MKGA 3IJ2A 4GLNE 1TZHV 1BJ1V 2FJGV 4BV4L 1BETA 2X1XE 4HQUA 4MIDA 1PDGA 2R52A 1WQ9B 5BQ8B 4HR9A 5HI4A 4MQWB 2QCQA 1DZ7A 1KTZA 1LX5A 1BNDA 4UI2B 1TZIV 2GYZA 4LXRJ 4N1DA 3B4VA 2BHKA 4HSAA 5HI3A 1FLTV 2XACA 4ZBNA 1JPYA 5BQ8D 2ARPA 3HH2A 3MJGA 1SG1A 2IFGE 3KFDA 5HI5A 4EC7A 3FUBB 3EVSB 4UHZA 4UHYA 1XWDB 1QFWA 1FL7B 2QJAA 3BMPA 1M4UL 5BPUA 2H62A 1B8KA 1E9JA 3BDYV 1LXIA 5JZ7A 1S4YB 1FZVA 1TGKA 2VXSA 1ES7A 1M4UA 4UI0A 1MKKA 5FV1V 5HHXA 3SEKB 1KLCA 2VPFA 2B0UA 2QR0C 5HHCA 4LXSJ 1NT3A 1HRPB 4AY9A 1QTYR 2GNNA 5FV2V 1QFWB 5HK5A 3BUKA 3S1KV 1BMPA 4EDXV 1WAQA 1SGFB 3P9WA 4YCGC 1REUA 2QJ9A 2XV7A 1REWA 2H64A 2X1WA 4EAXA 1BNDB 2GYRA 3E07A 5HHDA 1KATW 3MJKA 1AGQA 5E4GA 1HCNA 4AY9B 1RV6V 4EDWV 5BQBA 1HCFA 1B8MA 3V2AA 4KXZA 1NYUB 3S1BV 1VPFA 4QCIC 4MQWA 1ZKZA 2P6AA 4GLSE 2QJBA 1VPPV 1WWWV 4ZFFC 2C7WA 1HD4A 5AEJA 1TFGA 2FJHV 5HK5E 3V6BA 4QAFC 5F3HI 4UI1A 2ARVA 2GH0C 5HHVA 5BQEA 2ASKA 2GOOA 4KV5A 1HCNB 1AOCA 5F3BC 4FAOA 1B8MB 1MJVA 2PJYA 2TGIA 1XWDA 4EFVA 4XPJA 1FL7A 1WQ8A 4YCIC 3EO1C 1WQ9A 5BQ8A 2KD3A 3RJRA 2VWEA 1BTGA 2R53A 2QCWA 3BK3A 1B98A 3JVFA 3QB4A
chains in the Genus database with same CATH superfamily
5BQCA 4MPLA 2V5EB 5BQEB 1KLAA 4QHUC 4WPBA 4KZNA 1CZ8V 1TGJA 1HRPA 3QTKA 4HQXA 4X1JA 1NYSB 1MKGA 3IJ2A 4GLNE 1TZHV 1BJ1V 2FJGV 4BV4L 1BETA 2X1XE 4HQUA 4MIDA 1PDGA 2R52A 1WQ9B 5BQ8B 4HR9A 5HI4A 4MQWB 2QCQA 1DZ7A 1KTZA 1LX5A 1BNDA 4UI2B 1TZIV 2GYZA 4LXRJ 4N1DA 3B4VA 2BHKA 4HSAA 5HI3A 1FLTV 2XACA 4ZBNA 1JPYA 5BQ8D 2ARPA 3HH2A 3MJGA 1SG1A 2IFGE 3KFDA 5HI5A 4EC7A 3FUBB 3EVSB 4UHZA 4UHYA 1XWDB 1QFWA 1FL7B 2QJAA 3BMPA 1M4UL 5BPUA 2H62A 1B8KA 1E9JA 3BDYV 1LXIA 5JZ7A 1S4YB 1FZVA 1TGKA 2VXSA 1ES7A 1M4UA 4UI0A 1MKKA 5FV1V 5HHXA 3SEKB 1KLCA 2VPFA 2B0UA 2QR0C 5HHCA 4LXSJ 1NT3A 1HRPB 4AY9A 1QTYR 2GNNA 5FV2V 1QFWB 5HK5A 3BUKA 3S1KV 1BMPA 4EDXV 1WAQA 1SGFB 3P9WA 4YCGC 1REUA 2QJ9A 2XV7A 1REWA 2H64A 2X1WA 4EAXA 1BNDB 2GYRA 3E07A 5HHDA 1KATW 3MJKA 1AGQA 5E4GA 1HCNA 4AY9B 1RV6V 4EDWV 5BQBA 1HCFA 1B8MA 3V2AA 4KXZA 1NYUB 3S1BV 1VPFA 4QCIC 4MQWA 1ZKZA 2P6AA 4GLSE 2QJBA 1VPPV 1WWWV 4ZFFC 2C7WA 1HD4A 5AEJA 1TFGA 2FJHV 5HK5E 3V6BA 4QAFC 5F3HI 4UI1A 2ARVA 2GH0C 5HHVA 5BQEA 2ASKA 2GOOA 4KV5A 1HCNB 1AOCA 5F3BC 4FAOA 1B8MB 1MJVA 2PJYA 2TGIA 1XWDA 4EFVA 4XPJA 1FL7A 1WQ8A 4YCIC 3EO1C 1WQ9A 5BQ8A 2KD3A 3RJRA 2VWEA 1BTGA 2R53A 2QCWA 3BK3A 1B98A 3JVFA 3QB4A
chains in the Genus database with same CATH topology
5BQCA 4MPLA 2V5EB 5BQEB 1KLAA 4QHUC 4WPBA 4KZNA 1CZ8V 1TGJA 1HRPA 3QTKA 4HQXA 4X1JA 1NYSB 1MKGA 3IJ2A 4GLNE 1TZHV 1BJ1V 2FJGV 4BV4L 1BETA 2X1XE 4HQUA 4MIDA 1PDGA 2R52A 1WQ9B 5BQ8B 4HR9A 5HI4A 4MQWB 2QCQA 1DZ7A 1KTZA 1LX5A 1BNDA 4UI2B 1TZIV 2GYZA 4LXRJ 4N1DA 3B4VA 2BHKA 4HSAA 5HI3A 1FLTV 2XACA 4ZBNA 1JPYA 5BQ8D 2ARPA 3HH2A 3MJGA 1SG1A 2IFGE 3KFDA 5HI5A 4EC7A 3FUBB 3EVSB 4UHZA 4UHYA 1XWDB 1QFWA 1FL7B 2QJAA 3BMPA 1M4UL 5BPUA 2H62A 1B8KA 1E9JA 3BDYV 1LXIA 5JZ7A 1S4YB 1FZVA 1TGKA 2VXSA 1ES7A 1M4UA 4UI0A 1MKKA 5FV1V 5HHXA 3SEKB 1KLCA 2VPFA 2B0UA 2QR0C 5HHCA 4LXSJ 1NT3A 1HRPB 4AY9A 1QTYR 2GNNA 5FV2V 1QFWB 5HK5A 3BUKA 3S1KV 1BMPA 4EDXV 1WAQA 1SGFB 3P9WA 4YCGC 1REUA 2QJ9A 2XV7A 1REWA 2H64A 2X1WA 4EAXA 1BNDB 2GYRA 3E07A 5HHDA 1KATW 3MJKA 1AGQA 5E4GA 1HCNA 4AY9B 1RV6V 4EDWV 5BQBA 1HCFA 1B8MA 3V2AA 4KXZA 1NYUB 3S1BV 1VPFA 4QCIC 4MQWA 1ZKZA 2P6AA 4GLSE 2QJBA 1VPPV 1WWWV 4ZFFC 2C7WA 1HD4A 5AEJA 1TFGA 2FJHV 5HK5E 3V6BA 4QAFC 5F3HI 4UI1A 2ARVA 2GH0C 5HHVA 5BQEA 2ASKA 2GOOA 4KV5A 1HCNB 1AOCA 5F3BC 4FAOA 1B8MB 1MJVA 2PJYA 2TGIA 1XWDA 4EFVA 4XPJA 1FL7A 1WQ8A 4YCIC 3EO1C 1WQ9A 5BQ8A 2KD3A 3RJRA 2VWEA 1BTGA 2R53A 2QCWA 3BK3A 1B98A 3JVFA 3QB4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5BQC A;  4MPL A;  2V5E B;  5BQE B;  1KLA A;  4QHU C;  4WPB A;  4KZN A;  1CZ8 V;  1TGJ A;  1HRP A;  3QTK A;  4HQX A;  4X1J A;  1NYS B;  1MKG A;  3IJ2 A;  4GLN E;  1TZH V;  1BJ1 V;  2FJG V;  4BV4 L;  1BET A;  2X1X E;  4HQU A;  4MID A;  1PDG A;  2R52 A;  1WQ9 B;  5BQ8 B;  4HR9 A;  5HI4 A;  4MQW B;  2QCQ A;  1DZ7 A;  1KTZ A;  1LX5 A;  1BND A;  4UI2 B;  1TZI V;  2GYZ A;  4LXR J;  4N1D A;  3B4V A;  2BHK A;  4HSA A;  5HI3 A;  1FLT V;  2XAC A;  4ZBN A;  1JPY A;  5BQ8 D;  2ARP A;  3HH2 A;  3MJG A;  1SG1 A;  2IFG E;  3KFD A;  5HI5 A;  4EC7 A;  3FUB B;  3EVS B;  4UHZ A;  4UHY A;  1XWD B;  1QFW A;  1FL7 B;  2QJA A;  3BMP A;  1M4U L;  5BPU A;  2H62 A;  1B8K A;  1E9J A;  3BDY V;  1LXI A;  5JZ7 A;  1S4Y B;  1FZV A;  1TGK A;  2VXS A;  1ES7 A;  1M4U A;  4UI0 A;  1MKK A;  5FV1 V;  5HHX A;  3SEK B;  1KLC A;  2VPF A;  2B0U A;  2QR0 C;  5HHC A;  4LXS J;  1NT3 A;  1HRP B;  4AY9 A;  1QTY R;  2GNN A;  5FV2 V;  1QFW B;  5HK5 A;  3BUK A;  3S1K V;  1BMP A;  4EDX V;  1WAQ A;  1SGF B;  3P9W A;  4YCG C;  1REU A;  2QJ9 A;  2XV7 A;  1REW A;  2H64 A;  2X1W A;  4EAX A;  1BND B;  2GYR A;  3E07 A;  5HHD A;  1KAT W;  3MJK A;  1AGQ A;  5E4G A;  1HCN A;  4AY9 B;  1RV6 V;  4EDW V;  5BQB A;  1HCF A;  1B8M A;  3V2A A;  4KXZ A;  1NYU B;  3S1B V;  1VPF A;  4QCI C;  4MQW A;  1ZKZ A;  2P6A A;  4GLS E;  2QJB A;  1VPP V;  1WWW V;  4ZFF C;  2C7W A;  1HD4 A;  5AEJ A;  1TFG A;  2FJH V;  5HK5 E;  3V6B A;  4QAF C;  5F3H I;  4UI1 A;  2ARV A;  2GH0 C;  5HHV A;  5BQE A;  2ASK A;  2GOO A;  4KV5 A;  1HCN B;  1AOC A;  5F3B C;  4FAO A;  1B8M B;  1MJV A;  2PJY A;  2TGI A;  1XWD A;  4EFV A;  4XPJ A;  1FL7 A;  1WQ8 A;  4YCI C;  3EO1 C;  1WQ9 A;  5BQ8 A;  2KD3 A;  3RJR A;  2VWE A;  1BTG A;  2R53 A;  2QCW A;  3BK3 A;  1B98 A;  3JVF A;  3QB4 A; 
#chains in the Genus database with same CATH topology
 5BQC A;  4MPL A;  2V5E B;  5BQE B;  1KLA A;  4QHU C;  4WPB A;  4KZN A;  1CZ8 V;  1TGJ A;  1HRP A;  3QTK A;  4HQX A;  4X1J A;  1NYS B;  1MKG A;  3IJ2 A;  4GLN E;  1TZH V;  1BJ1 V;  2FJG V;  4BV4 L;  1BET A;  2X1X E;  4HQU A;  4MID A;  1PDG A;  2R52 A;  1WQ9 B;  5BQ8 B;  4HR9 A;  5HI4 A;  4MQW B;  2QCQ A;  1DZ7 A;  1KTZ A;  1LX5 A;  1BND A;  4UI2 B;  1TZI V;  2GYZ A;  4LXR J;  4N1D A;  3B4V A;  2BHK A;  4HSA A;  5HI3 A;  1FLT V;  2XAC A;  4ZBN A;  1JPY A;  5BQ8 D;  2ARP A;  3HH2 A;  3MJG A;  1SG1 A;  2IFG E;  3KFD A;  5HI5 A;  4EC7 A;  3FUB B;  3EVS B;  4UHZ A;  4UHY A;  1XWD B;  1QFW A;  1FL7 B;  2QJA A;  3BMP A;  1M4U L;  5BPU A;  2H62 A;  1B8K A;  1E9J A;  3BDY V;  1LXI A;  5JZ7 A;  1S4Y B;  1FZV A;  1TGK A;  2VXS A;  1ES7 A;  1M4U A;  4UI0 A;  1MKK A;  5FV1 V;  5HHX A;  3SEK B;  1KLC A;  2VPF A;  2B0U A;  2QR0 C;  5HHC A;  4LXS J;  1NT3 A;  1HRP B;  4AY9 A;  1QTY R;  2GNN A;  5FV2 V;  1QFW B;  5HK5 A;  3BUK A;  3S1K V;  1BMP A;  4EDX V;  1WAQ A;  1SGF B;  3P9W A;  4YCG C;  1REU A;  2QJ9 A;  2XV7 A;  1REW A;  2H64 A;  2X1W A;  4EAX A;  1BND B;  2GYR A;  3E07 A;  5HHD A;  1KAT W;  3MJK A;  1AGQ A;  5E4G A;  1HCN A;  4AY9 B;  1RV6 V;  4EDW V;  5BQB A;  1HCF A;  1B8M A;  3V2A A;  4KXZ A;  1NYU B;  3S1B V;  1VPF A;  4QCI C;  4MQW A;  1ZKZ A;  2P6A A;  4GLS E;  2QJB A;  1VPP V;  1WWW V;  4ZFF C;  2C7W A;  1HD4 A;  5AEJ A;  1TFG A;  2FJH V;  5HK5 E;  3V6B A;  4QAF C;  5F3H I;  4UI1 A;  2ARV A;  2GH0 C;  5HHV A;  5BQE A;  2ASK A;  2GOO A;  4KV5 A;  1HCN B;  1AOC A;  5F3B C;  4FAO A;  1B8M B;  1MJV A;  2PJY A;  2TGI A;  1XWD A;  4EFV A;  4XPJ A;  1FL7 A;  1WQ8 A;  4YCI C;  3EO1 C;  1WQ9 A;  5BQ8 A;  2KD3 A;  3RJR A;  2VWE A;  1BTG A;  2R53 A;  2QCW A;  3BK3 A;  1B98 A;  3JVF A;  3QB4 A; 
#chains in the Genus database with same CATH homology
 5BQC A;  4MPL A;  2V5E B;  5BQE B;  1KLA A;  4QHU C;  4WPB A;  4KZN A;  1CZ8 V;  1TGJ A;  1HRP A;  3QTK A;  4HQX A;  4X1J A;  1NYS B;  1MKG A;  3IJ2 A;  4GLN E;  1TZH V;  1BJ1 V;  2FJG V;  4BV4 L;  1BET A;  2X1X E;  4HQU A;  4MID A;  1PDG A;  2R52 A;  1WQ9 B;  5BQ8 B;  4HR9 A;  5HI4 A;  4MQW B;  2QCQ A;  1DZ7 A;  1KTZ A;  1LX5 A;  1BND A;  4UI2 B;  1TZI V;  2GYZ A;  4LXR J;  4N1D A;  3B4V A;  2BHK A;  4HSA A;  5HI3 A;  1FLT V;  2XAC A;  4ZBN A;  1JPY A;  5BQ8 D;  2ARP A;  3HH2 A;  3MJG A;  1SG1 A;  2IFG E;  3KFD A;  5HI5 A;  4EC7 A;  3FUB B;  3EVS B;  4UHZ A;  4UHY A;  1XWD B;  1QFW A;  1FL7 B;  2QJA A;  3BMP A;  1M4U L;  5BPU A;  2H62 A;  1B8K A;  1E9J A;  3BDY V;  1LXI A;  5JZ7 A;  1S4Y B;  1FZV A;  1TGK A;  2VXS A;  1ES7 A;  1M4U A;  4UI0 A;  1MKK A;  5FV1 V;  5HHX A;  3SEK B;  1KLC A;  2VPF A;  2B0U A;  2QR0 C;  5HHC A;  4LXS J;  1NT3 A;  1HRP B;  4AY9 A;  1QTY R;  2GNN A;  5FV2 V;  1QFW B;  5HK5 A;  3BUK A;  3S1K V;  1BMP A;  4EDX V;  1WAQ A;  1SGF B;  3P9W A;  4YCG C;  1REU A;  2QJ9 A;  2XV7 A;  1REW A;  2H64 A;  2X1W A;  4EAX A;  1BND B;  2GYR A;  3E07 A;  5HHD A;  1KAT W;  3MJK A;  1AGQ A;  5E4G A;  1HCN A;  4AY9 B;  1RV6 V;  4EDW V;  5BQB A;  1HCF A;  1B8M A;  3V2A A;  4KXZ A;  1NYU B;  3S1B V;  1VPF A;  4QCI C;  4MQW A;  1ZKZ A;  2P6A A;  4GLS E;  2QJB A;  1VPP V;  1WWW V;  4ZFF C;  2C7W A;  1HD4 A;  5AEJ A;  1TFG A;  2FJH V;  5HK5 E;  3V6B A;  4QAF C;  5F3H I;  4UI1 A;  2ARV A;  2GH0 C;  5HHV A;  5BQE A;  2ASK A;  2GOO A;  4KV5 A;  1HCN B;  1AOC A;  5F3B C;  4FAO A;  1B8M B;  1MJV A;  2PJY A;  2TGI A;  1XWD A;  4EFV A;  4XPJ A;  1FL7 A;  1WQ8 A;  4YCI C;  3EO1 C;  1WQ9 A;  5BQ8 A;  2KD3 A;  3RJR A;  2VWE A;  1BTG A;  2R53 A;  2QCW A;  3BK3 A;  1B98 A;  3JVF A;  3QB4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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