2H3UA

Crystal structure of murine carnitine acetyltransferase in complex with carnitine and coa
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
pubmed doi rcsb
molecule keywords carnitine acetyltransferase
source organism Mus musculus
molecule tags Transferase
total genus 222
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2006-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA02
4EYWA 1NDFA 1NM8A 1T7QA 2FYOA 2H3PA 1T1UA 2DEBA 2H4TA 1S5OA 1T7OA 1Q6XA 4EP9A 1NDBA 4EPHA 1NDIA 2FY2A 2RCUA 2FY5A 2FY4A 2FW3A 1T7NA 2H3WA 2H3UA 2FY3A
chains in the Genus database with same CATH superfamily
4EYWA 2I9DA 4N72A 3FOTA 1XMDA 1NM8A 4G0BA 4JN3A 3U9BA 1T1UA 3B2SA 4KE4A 1Q9JA 2VSQA 1XL8A 4EP9A 1EACA 1C4TA 5DUAA 2FY4A 1EADA 3FP0A 2H3UA 2II5A 4HVMA 2ZBAA 4G22A 2E1UA 1SCZA 3L60A 1Q23A 2II4A 2FYOA 1T7OA 5FANA 2CLAA 2E1VA 3MAEA 1XL7A 1CIAA 2FY3A 1CLAA 1DPCA 1DPBA 1NDFA 2XHGA 1EAEA 3CLAA 5KJTA 1PD5A 5KJVA 5T3EA 5KJSA 1T7QA 2H3PA 5KJUA 2DEBA 2H4TA 5FALA 1QCAA 1Q6XA 4EPHA 4KECA 2RKVA 1NOCB 1T7NA 4CLAA 2XR7A 1XMCA 2JGPA 1EAFA 2II3A 1E2OA 3U9FA 2E1TA 3B30A 5KJWA 1S5OA 2BGHA 2IHWA 1EABA 5DU9A 4JN5A 1EAAA 2RKTA 1DPDA 1NDBA 1NDIA 2FY2A 2RCUA 2FY5A 4G2MA 2FW3A 2H3WA 1L5AA
chains in the Genus database with same CATH topology
2JGPA 4EYWA 1NDFA 2XHGA 3FOTA 5T3EA 1NM8A 1T7QA 2FYOA 2H3PA 4JN3A 1T1UA 2DEBA 2H4TA 1S5OA 1T7OA 1Q9JA 5DU9A 4JN5A 2VSQA 1Q6XA 4EP9A 1NDBA 4EPHA 1NDIA 2FY2A 5DUAA 2RCUA 2FY5A 2FY4A 2FW3A 1T7NA 2H3WA 3FP0A 2H3UA 2FY3A 4HVMA 1L5AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4EYW A;  1NDF A;  1NM8 A;  1T7Q A;  2FYO A;  2H3P A;  1T1U A;  2DEB A;  2H4T A;  1S5O A;  1T7O A;  1Q6X A;  4EP9 A;  1NDB A;  4EPH A;  1NDI A;  2FY2 A;  2RCU A;  2FY5 A;  2FY4 A;  2FW3 A;  1T7N A;  2H3W A;  2H3U A;  2FY3 A; 
#chains in the Genus database with same CATH topology
 4EYW A;  2I9D A;  4N72 A;  3FOT A;  1XMD A;  1NM8 A;  4G0B A;  4JN3 A;  3U9B A;  1T1U A;  3B2S A;  4KE4 A;  1Q9J A;  2VSQ A;  1XL8 A;  4EP9 A;  1EAC A;  1C4T A;  5DUA A;  2FY4 A;  1EAD A;  3FP0 A;  2H3U A;  2II5 A;  4HVM A;  2ZBA A;  4G22 A;  2E1U A;  1SCZ A;  3L60 A;  1Q23 A;  2II4 A;  2FYO A;  1T7O A;  5FAN A;  2CLA A;  2E1V A;  3MAE A;  1XL7 A;  1CIA A;  2FY3 A;  1CLA A;  1DPC A;  1DPB A;  1NDF A;  2XHG A;  1EAE A;  3CLA A;  5KJT A;  1PD5 A;  5KJV A;  5T3E A;  5KJS A;  1T7Q A;  2H3P A;  5KJU A;  2DEB A;  2H4T A;  5FAL A;  1QCA A;  1Q6X A;  4EPH A;  4KEC A;  2RKV A;  1NOC B;  1T7N A;  4CLA A;  2XR7 A;  1XMC A;  2JGP A;  1EAF A;  2II3 A;  1E2O A;  3U9F A;  2E1T A;  3B30 A;  5KJW A;  1S5O A;  2BGH A;  2IHW A;  1EAB A;  5DU9 A;  4JN5 A;  1EAA A;  2RKT A;  1DPD A;  1NDB A;  1NDI A;  2FY2 A;  2RCU A;  2FY5 A;  4G2M A;  2FW3 A;  2H3W A;  1L5A A; 
#chains in the Genus database with same CATH homology
 2JGP A;  4EYW A;  1NDF A;  2XHG A;  3FOT A;  5T3E A;  1NM8 A;  1T7Q A;  2FYO A;  2H3P A;  4JN3 A;  1T1U A;  2DEB A;  2H4T A;  1S5O A;  1T7O A;  1Q9J A;  5DU9 A;  4JN5 A;  2VSQ A;  1Q6X A;  4EP9 A;  1NDB A;  4EPH A;  1NDI A;  2FY2 A;  5DUA A;  2RCU A;  2FY5 A;  2FY4 A;  2FW3 A;  1T7N A;  2H3W A;  3FP0 A;  2H3U A;  2FY3 A;  4HVM A;  1L5A A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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