2H3UA

Crystal structure of murine carnitine acetyltransferase in complex with carnitine and coa
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Mus musculus
publication title Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
pubmed doi rcsb
molecule keywords carnitine acetyltransferase
total genus 222
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2006-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA02
4EYWA 2H3UA 1T1UA 1T7QA 2FW3A 2RCUA 1Q6XA 2H4TA 2FYOA 1T7NA 2H3PA 4EP9A 1T7OA 1NDIA 2H3WA 2FY2A 2DEBA 2FY5A 2FY3A 4EPHA 1NM8A 1NDBA 1NDFA 1S5OA 2FY4A
chains in the Genus database with same CATH superfamily
5DUAA 3U9BA 4G22A 5FANA 1EADA 1EACA 1Q6XA 1XMDA 2FYOA 1T7NA 2H3PA 3L60A 3MAEA 5FALA 2FY2A 5DU9A 2ZBAA 1DPCA 4KE4A 2II5A 2FY3A 1CIAA 1NM8A 1NDBA 5KJWA 2JGPA 2E1UA 1EAFA 4EYWA 1PD5A 1T1UA 1DPDA 1XL8A 2II4A 1T7OA 2XR7A 4CLAA 5KJTA 1QCAA 4HVMA 4EPHA 1SCZA 3FOTA 5KJSA 1S5OA 1EABA 3FP0A 3B2SA 2II3A 1NOCB 2H4TA 4EP9A 3U9FA 1L5AA 1XL7A 1Q9JA 4KECA 4JN5A 2BGHA 3CLAA 4JN3A 1EAEA 2H3UA 2RKVA 1T7QA 2FW3A 2RCUA 1E2OA 5KJVA 2IHWA 2VSQA 1C4TA 5T3EA 1XMCA 1NDIA 2E1VA 2H3WA 2XHGA 4N72A 2CLAA 4G2MA 1Q23A 2I9DA 2DEBA 1EAAA 2E1TA 2FY5A 1CLAA 3B30A 1DPBA 5KJUA 4G0BA 1NDFA 2RKTA 2FY4A
chains in the Genus database with same CATH topology
4JN5A 5DUAA 4EYWA 4JN3A 2H3UA 1T1UA 1T7QA 3FP0A 2FW3A 2RCUA 1Q6XA 2H4TA 2FYOA 2VSQA 1T7NA 2H3PA 4EP9A 1T7OA 5T3EA 1NDIA 2XHGA 2H3WA 1L5AA 2FY2A 5DU9A 2DEBA 4HVMA 2FY5A 2FY3A 4EPHA 1NM8A 3FOTA 1NDBA 1NDFA 1Q9JA 1S5OA 2JGPA 2FY4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4EYW A;  2H3U A;  1T1U A;  1T7Q A;  2FW3 A;  2RCU A;  1Q6X A;  2H4T A;  2FYO A;  1T7N A;  2H3P A;  4EP9 A;  1T7O A;  1NDI A;  2H3W A;  2FY2 A;  2DEB A;  2FY5 A;  2FY3 A;  4EPH A;  1NM8 A;  1NDB A;  1NDF A;  1S5O A;  2FY4 A; 
#chains in the Genus database with same CATH topology
 5DUA A;  3U9B A;  4G22 A;  5FAN A;  1EAD A;  1EAC A;  1Q6X A;  1XMD A;  2FYO A;  1T7N A;  2H3P A;  3L60 A;  3MAE A;  5FAL A;  2FY2 A;  5DU9 A;  2ZBA A;  1DPC A;  4KE4 A;  2II5 A;  2FY3 A;  1CIA A;  1NM8 A;  1NDB A;  5KJW A;  2JGP A;  2E1U A;  1EAF A;  4EYW A;  1PD5 A;  1T1U A;  1DPD A;  1XL8 A;  2II4 A;  1T7O A;  2XR7 A;  4CLA A;  5KJT A;  1QCA A;  4HVM A;  4EPH A;  1SCZ A;  3FOT A;  5KJS A;  1S5O A;  1EAB A;  3FP0 A;  3B2S A;  2II3 A;  1NOC B;  2H4T A;  4EP9 A;  3U9F A;  1L5A A;  1XL7 A;  1Q9J A;  4KEC A;  4JN5 A;  2BGH A;  3CLA A;  4JN3 A;  1EAE A;  2H3U A;  2RKV A;  1T7Q A;  2FW3 A;  2RCU A;  1E2O A;  5KJV A;  2IHW A;  2VSQ A;  1C4T A;  5T3E A;  1XMC A;  1NDI A;  2E1V A;  2H3W A;  2XHG A;  4N72 A;  2CLA A;  4G2M A;  1Q23 A;  2I9D A;  2DEB A;  1EAA A;  2E1T A;  2FY5 A;  1CLA A;  3B30 A;  1DPB A;  5KJU A;  4G0B A;  1NDF A;  2RKT A;  2FY4 A; 
#chains in the Genus database with same CATH homology
 4JN5 A;  5DUA A;  4EYW A;  4JN3 A;  2H3U A;  1T1U A;  1T7Q A;  3FP0 A;  2FW3 A;  2RCU A;  1Q6X A;  2H4T A;  2FYO A;  2VSQ A;  1T7N A;  2H3P A;  4EP9 A;  1T7O A;  5T3E A;  1NDI A;  2XHG A;  2H3W A;  1L5A A;  2FY2 A;  5DU9 A;  2DEB A;  4HVM A;  2FY5 A;  2FY3 A;  4EPH A;  1NM8 A;  3FOT A;  1NDB A;  1NDF A;  1Q9J A;  1S5O A;  2JGP A;  2FY4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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