2H3UA

Crystal structure of murine carnitine acetyltransferase in complex with carnitine and coa
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
599
structure length
599
Chain Sequence
b'SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords carnitine acetyltransferase
publication title Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
pubmed doi rcsb
source organism Mus musculus
molecule tags Transferase
total genus 222
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2006-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA02
2H4TA 1S5OA 2FYOA 2H3UA 1Q6XA 2H3PA 2FY4A 4EP9A 2FY2A 1T7OA 1T7NA 1NDBA 1NDFA 2FY3A 2FY5A 2DEBA 1NDIA 4EPHA 1NM8A 4EYWA 2RCUA 2FW3A 2H3WA 1T7QA 1T1UA
chains in the Genus database with same CATH superfamily
1EADA 1QCAA 1XL7A 2JGPA 1CLAA 2ZBAA 2H3PA 2II4A 1NOCB 1T7OA 1XL8A 3FP0A 4HVMA 1NDFA 4KE4A 1L5AA 2VSQA 1CIAA 1DPDA 4KECA 4JN3A 4G22A 3U9BA 5FALA 2RCUA 2H3WA 2BGHA 2H4TA 1S5OA 2FYOA 4G0BA 5FANA 1XMDA 1EAEA 2RKVA 2RKTA 2IHWA 2FY5A 4EPHA 2XHGA 4EYWA 2I9DA 3U9FA 2FW3A 1XMCA 1Q9JA 2CLAA 3L60A 1PD5A 1EABA 2XR7A 3CLAA 4G2MA 1T7NA 3MAEA 5KJUA 1NDBA 3B30A 5DUAA 2DEBA 1NDIA 2II5A 1DPCA 1C4TA 1T1UA 1E2OA 5DU9A 1EACA 2E1TA 4N72A 2H3UA 4CLAA 1Q23A 1Q6XA 1SCZA 2FY4A 3FOTA 1EAFA 4EP9A 2FY2A 5KJVA 2II3A 5KJTA 3B2SA 2FY3A 1DPBA 5KJSA 1NM8A 5T3EA 2E1UA 5KJWA 1EAAA 1T7QA 4JN5A 2E1VA
chains in the Genus database with same CATH topology
2H4TA 1S5OA 2JGPA 2FYOA 2H3UA 1Q6XA 2H3PA 2FY4A 3FOTA 4EP9A 2FY2A 1T7OA 1T7NA 3FP0A 1NDBA 4HVMA 1NDFA 1L5AA 5DUAA 2FY3A 2FY5A 2VSQA 2DEBA 1NDIA 4EPHA 1NM8A 2XHGA 4JN3A 4EYWA 5T3EA 2RCUA 2FW3A 2H3WA 1T7QA 4JN5A 1T1UA 1Q9JA 5DU9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H4T A;  1S5O A;  2FYO A;  2H3U A;  1Q6X A;  2H3P A;  2FY4 A;  4EP9 A;  2FY2 A;  1T7O A;  1T7N A;  1NDB A;  1NDF A;  2FY3 A;  2FY5 A;  2DEB A;  1NDI A;  4EPH A;  1NM8 A;  4EYW A;  2RCU A;  2FW3 A;  2H3W A;  1T7Q A;  1T1U A; 
#chains in the Genus database with same CATH topology
 1EAD A;  1QCA A;  1XL7 A;  2JGP A;  1CLA A;  2ZBA A;  2H3P A;  2II4 A;  1NOC B;  1T7O A;  1XL8 A;  3FP0 A;  4HVM A;  1NDF A;  4KE4 A;  1L5A A;  2VSQ A;  1CIA A;  1DPD A;  4KEC A;  4JN3 A;  4G22 A;  3U9B A;  5FAL A;  2RCU A;  2H3W A;  2BGH A;  2H4T A;  1S5O A;  2FYO A;  4G0B A;  5FAN A;  1XMD A;  1EAE A;  2RKV A;  2RKT A;  2IHW A;  2FY5 A;  4EPH A;  2XHG A;  4EYW A;  2I9D A;  3U9F A;  2FW3 A;  1XMC A;  1Q9J A;  2CLA A;  3L60 A;  1PD5 A;  1EAB A;  2XR7 A;  3CLA A;  4G2M A;  1T7N A;  3MAE A;  5KJU A;  1NDB A;  3B30 A;  5DUA A;  2DEB A;  1NDI A;  2II5 A;  1DPC A;  1C4T A;  1T1U A;  1E2O A;  5DU9 A;  1EAC A;  2E1T A;  4N72 A;  2H3U A;  4CLA A;  1Q23 A;  1Q6X A;  1SCZ A;  2FY4 A;  3FOT A;  1EAF A;  4EP9 A;  2FY2 A;  5KJV A;  2II3 A;  5KJT A;  3B2S A;  2FY3 A;  1DPB A;  5KJS A;  1NM8 A;  5T3E A;  2E1U A;  5KJW A;  1EAA A;  1T7Q A;  4JN5 A;  2E1V A; 
#chains in the Genus database with same CATH homology
 2H4T A;  1S5O A;  2JGP A;  2FYO A;  2H3U A;  1Q6X A;  2H3P A;  2FY4 A;  3FOT A;  4EP9 A;  2FY2 A;  1T7O A;  1T7N A;  3FP0 A;  1NDB A;  4HVM A;  1NDF A;  1L5A A;  5DUA A;  2FY3 A;  2FY5 A;  2VSQ A;  2DEB A;  1NDI A;  4EPH A;  1NM8 A;  2XHG A;  4JN3 A;  4EYW A;  5T3E A;  2RCU A;  2FW3 A;  2H3W A;  1T7Q A;  4JN5 A;  1T1U A;  1Q9J A;  5DU9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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