2H3UA

Crystal structure of murine carnitine acetyltransferase in complex with carnitine and coa
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVMFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords carnitine acetyltransferase
publication title Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
pubmed doi rcsb
source organism Mus musculus
molecule tags Transferase
total genus 222
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2006-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3uA02
2FW3A 2RCUA 1NDFA 2FY3A 1NDBA 4EPHA 2H3PA 2H3WA 2H3UA 2H4TA 2FY5A 2FYOA 1T7OA 2FY2A 1T1UA 2DEBA 2FY4A 4EYWA 1T7QA 4EP9A 1T7NA 1NDIA 1S5OA 1NM8A 1Q6XA
chains in the Genus database with same CATH superfamily
5KJUA 1C4TA 2E1UA 2FW3A 3B2SA 1EAEA 1NDFA 4EPHA 2ZBAA 2H4TA 5FANA 3L60A 1EAAA 2II4A 4KECA 1L5AA 1T7QA 1SCZA 4KE4A 5T3EA 1CLAA 5KJSA 5FALA 2CLAA 2H3WA 1T7OA 5KJVA 4JN5A 2FY4A 2VSQA 3B30A 1XMDA 5DUAA 1XL7A 4G22A 1NOCB 5KJWA 1DPBA 2RKVA 1NM8A 4G2MA 1E2OA 1PD5A 2XHGA 2BGHA 4G0BA 3U9BA 1EACA 2RCUA 2II3A 1NDBA 2I9DA 4CLAA 1EAFA 1XL8A 2FY5A 2E1VA 2FYOA 2E1TA 1QCAA 1T1UA 2DEBA 1CIAA 4EYWA 1Q9JA 3FP0A 4EP9A 1NDIA 1EABA 1XMCA 1DPCA 2FY3A 2JGPA 2H3PA 2RKTA 2IHWA 3MAEA 2H3UA 5DU9A 2XR7A 3CLAA 2II5A 1EADA 2FY2A 3U9FA 3FOTA 1DPDA 1T7NA 1S5OA 4N72A 4HVMA 5KJTA 1Q23A 4JN3A 1Q6XA
chains in the Genus database with same CATH topology
2XHGA 2FW3A 2RCUA 1NDFA 2FY3A 1NDBA 2JGPA 4EPHA 2H3PA 2H3WA 2H3UA 2H4TA 5DU9A 2FY5A 2FYOA 1T7OA 2FY2A 1T1UA 2DEBA 4JN5A 2FY4A 4EYWA 2VSQA 1L5AA 1T7QA 3FOTA 1Q9JA 3FP0A 4EP9A 5DUAA 1T7NA 1NDIA 5T3EA 1S5OA 4HVMA 1NM8A 4JN3A 1Q6XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FW3 A;  2RCU A;  1NDF A;  2FY3 A;  1NDB A;  4EPH A;  2H3P A;  2H3W A;  2H3U A;  2H4T A;  2FY5 A;  2FYO A;  1T7O A;  2FY2 A;  1T1U A;  2DEB A;  2FY4 A;  4EYW A;  1T7Q A;  4EP9 A;  1T7N A;  1NDI A;  1S5O A;  1NM8 A;  1Q6X A; 
#chains in the Genus database with same CATH topology
 5KJU A;  1C4T A;  2E1U A;  2FW3 A;  3B2S A;  1EAE A;  1NDF A;  4EPH A;  2ZBA A;  2H4T A;  5FAN A;  3L60 A;  1EAA A;  2II4 A;  4KEC A;  1L5A A;  1T7Q A;  1SCZ A;  4KE4 A;  5T3E A;  1CLA A;  5KJS A;  5FAL A;  2CLA A;  2H3W A;  1T7O A;  5KJV A;  4JN5 A;  2FY4 A;  2VSQ A;  3B30 A;  1XMD A;  5DUA A;  1XL7 A;  4G22 A;  1NOC B;  5KJW A;  1DPB A;  2RKV A;  1NM8 A;  4G2M A;  1E2O A;  1PD5 A;  2XHG A;  2BGH A;  4G0B A;  3U9B A;  1EAC A;  2RCU A;  2II3 A;  1NDB A;  2I9D A;  4CLA A;  1EAF A;  1XL8 A;  2FY5 A;  2E1V A;  2FYO A;  2E1T A;  1QCA A;  1T1U A;  2DEB A;  1CIA A;  4EYW A;  1Q9J A;  3FP0 A;  4EP9 A;  1NDI A;  1EAB A;  1XMC A;  1DPC A;  2FY3 A;  2JGP A;  2H3P A;  2RKT A;  2IHW A;  3MAE A;  2H3U A;  5DU9 A;  2XR7 A;  3CLA A;  2II5 A;  1EAD A;  2FY2 A;  3U9F A;  3FOT A;  1DPD A;  1T7N A;  1S5O A;  4N72 A;  4HVM A;  5KJT A;  1Q23 A;  4JN3 A;  1Q6X A; 
#chains in the Genus database with same CATH homology
 2XHG A;  2FW3 A;  2RCU A;  1NDF A;  2FY3 A;  1NDB A;  2JGP A;  4EPH A;  2H3P A;  2H3W A;  2H3U A;  2H4T A;  5DU9 A;  2FY5 A;  2FYO A;  1T7O A;  2FY2 A;  1T1U A;  2DEB A;  4JN5 A;  2FY4 A;  4EYW A;  2VSQ A;  1L5A A;  1T7Q A;  3FOT A;  1Q9J A;  3FP0 A;  4EP9 A;  5DUA A;  1T7N A;  1NDI A;  5T3E A;  1S5O A;  4HVM A;  1NM8 A;  4JN3 A;  1Q6X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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