2I9DA

Chloramphenicol acetyltransferase
Total Genus 66
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
66
sequence length
214
structure length
214
Chain Sequence
MKQIIDIENWERKENFNFFRHFQNPQLSITSEVECGGARQRAKAAGQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKIKENGKFFTTRFPYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFTSITGTQEKRSGNNYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Chloramphenicol acetyltransferase
publication title chloramphenicol acetyltransferase
rcsb
source organism Bacteroides thetaiotaomicron
molecule tags Transferase
total genus 66
structure length 214
sequence length 214
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2006-09-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00302 CAT Chloramphenicol acetyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 2i9dA00
4CLAA 5DUAA 2IHWA 5FALA 1XMDA 2XHGA 1XL8A 4N72A 1QCAA 2XR7A 5DU9A 2E1VA 1C4TA 1EACA 1DPBA 2VSQA 4KE4A 3U9FA 3B2SA 1Q9JA 5KJTA 4JN3A 3L60A 1CLAA 1EAEA 2II3A 1PD5A 1XL7A 5T3EA 4HVMA 1Q23A 5KJSA 1EABA 1L5AA 2E1TA 2CLAA 2ZBAA 1CIAA 1XMCA 5FANA 3MAEA 2I9DA 1DPCA 1EADA 5KJUA 2JGPA 2II4A 4JN5A 2II5A 1SCZA 1EAAA 2RKVA 3B30A 1E2OA 3CLAA 2E1UA 4G0BA 4G22A 2RKTA 4G2MA 4KECA 5KJVA 3FP0A 5KJWA 3FOTA 2BGHA 3U9BA 1DPDA 1NOCB 1EAFA
chains in the Genus database with same CATH superfamily
5DUAA 2IHWA 4EYWA 5DU9A 4N72A 2XR7A 1DPBA 1CLAA 1EAEA 2II3A 2FY3A 1XL7A 4HVMA 1Q23A 2E1TA 1CIAA 1Q6XA 1SCZA 1E2OA 2H3UA 2RKTA 1EAFA 2FW3A 2H4TA 5FALA 2E1VA 3U9FA 1T7OA 4JN3A 3L60A 5KJSA 2CLAA 1XMCA 1T7QA 3MAEA 1NM8A 2FY4A 2II5A 4CLAA 3CLAA 4G0BA 5KJVA 5KJWA 2BGHA 4EPHA 3B2SA 1XMDA 2XHGA 2FY2A 1QCAA 1C4TA 1EACA 2VSQA 4KE4A 1Q9JA 5KJTA 1NDIA 2RCUA 5T3EA 2I9DA 1DPCA 5KJUA 1NOCB 4JN5A 3B30A 4G2MA 2RKVA 3FOTA 1S5OA 1DPDA 4EP9A 1XL8A 2H3PA 1PD5A 1EABA 1L5AA 2ZBAA 5FANA 1NDFA 1EADA 2DEBA 2JGPA 2II4A 2FYOA 3U9BA 1EAAA 4G22A 2E1UA 4KECA 1NDBA 2FY5A 3FP0A 1T7NA 2H3WA 1T1UA
chains in the Genus database with same CATH topology
4CLAA 5DUAA 2IHWA 5FALA 1XMDA 2XHGA 1XL8A 4N72A 1QCAA 2XR7A 5DU9A 2E1VA 1C4TA 1EACA 1DPBA 2VSQA 4KE4A 3U9FA 3B2SA 1Q9JA 5KJTA 4JN3A 3L60A 1CLAA 1EAEA 2II3A 1PD5A 1XL7A 5T3EA 4HVMA 1Q23A 5KJSA 1EABA 1L5AA 2E1TA 2CLAA 2ZBAA 1CIAA 1XMCA 5FANA 3MAEA 2I9DA 1DPCA 1EADA 5KJUA 2JGPA 2II4A 4JN5A 2II5A 1SCZA 1EAAA 2RKVA 3B30A 1E2OA 3CLAA 2E1UA 4G0BA 4G22A 2RKTA 4G2MA 4KECA 5KJVA 3FP0A 5KJWA 3FOTA 2BGHA 3U9BA 1DPDA 1NOCB 1EAFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CLA A;  5DUA A;  2IHW A;  5FAL A;  1XMD A;  2XHG A;  1XL8 A;  4N72 A;  1QCA A;  2XR7 A;  5DU9 A;  2E1V A;  1C4T A;  1EAC A;  1DPB A;  2VSQ A;  4KE4 A;  3U9F A;  3B2S A;  1Q9J A;  5KJT A;  4JN3 A;  3L60 A;  1CLA A;  1EAE A;  2II3 A;  1PD5 A;  1XL7 A;  5T3E A;  4HVM A;  1Q23 A;  5KJS A;  1EAB A;  1L5A A;  2E1T A;  2CLA A;  2ZBA A;  1CIA A;  1XMC A;  5FAN A;  3MAE A;  2I9D A;  1DPC A;  1EAD A;  5KJU A;  2JGP A;  2II4 A;  4JN5 A;  2II5 A;  1SCZ A;  1EAA A;  2RKV A;  3B30 A;  1E2O A;  3CLA A;  2E1U A;  4G0B A;  4G22 A;  2RKT A;  4G2M A;  4KEC A;  5KJV A;  3FP0 A;  5KJW A;  3FOT A;  2BGH A;  3U9B A;  1DPD A;  1NOC B;  1EAF A; 
#chains in the Genus database with same CATH topology
 5DUA A;  2IHW A;  4EYW A;  5DU9 A;  4N72 A;  2XR7 A;  1DPB A;  1CLA A;  1EAE A;  2II3 A;  2FY3 A;  1XL7 A;  4HVM A;  1Q23 A;  2E1T A;  1CIA A;  1Q6X A;  1SCZ A;  1E2O A;  2H3U A;  2RKT A;  1EAF A;  2FW3 A;  2H4T A;  5FAL A;  2E1V A;  3U9F A;  1T7O A;  4JN3 A;  3L60 A;  5KJS A;  2CLA A;  1XMC A;  1T7Q A;  3MAE A;  1NM8 A;  2FY4 A;  2II5 A;  4CLA A;  3CLA A;  4G0B A;  5KJV A;  5KJW A;  2BGH A;  4EPH A;  3B2S A;  1XMD A;  2XHG A;  2FY2 A;  1QCA A;  1C4T A;  1EAC A;  2VSQ A;  4KE4 A;  1Q9J A;  5KJT A;  1NDI A;  2RCU A;  5T3E A;  2I9D A;  1DPC A;  5KJU A;  1NOC B;  4JN5 A;  3B30 A;  4G2M A;  2RKV A;  3FOT A;  1S5O A;  1DPD A;  4EP9 A;  1XL8 A;  2H3P A;  1PD5 A;  1EAB A;  1L5A A;  2ZBA A;  5FAN A;  1NDF A;  1EAD A;  2DEB A;  2JGP A;  2II4 A;  2FYO A;  3U9B A;  1EAA A;  4G22 A;  2E1U A;  4KEC A;  1NDB A;  2FY5 A;  3FP0 A;  1T7N A;  2H3W A;  1T1U A; 
#chains in the Genus database with same CATH homology
 4CLA A;  5DUA A;  2IHW A;  5FAL A;  1XMD A;  2XHG A;  1XL8 A;  4N72 A;  1QCA A;  2XR7 A;  5DU9 A;  2E1V A;  1C4T A;  1EAC A;  1DPB A;  2VSQ A;  4KE4 A;  3U9F A;  3B2S A;  1Q9J A;  5KJT A;  4JN3 A;  3L60 A;  1CLA A;  1EAE A;  2II3 A;  1PD5 A;  1XL7 A;  5T3E A;  4HVM A;  1Q23 A;  5KJS A;  1EAB A;  1L5A A;  2E1T A;  2CLA A;  2ZBA A;  1CIA A;  1XMC A;  5FAN A;  3MAE A;  2I9D A;  1DPC A;  1EAD A;  5KJU A;  2JGP A;  2II4 A;  4JN5 A;  2II5 A;  1SCZ A;  1EAA A;  2RKV A;  3B30 A;  1E2O A;  3CLA A;  2E1U A;  4G0B A;  4G22 A;  2RKT A;  4G2M A;  4KEC A;  5KJV A;  3FP0 A;  5KJW A;  3FOT A;  2BGH A;  3U9B A;  1DPD A;  1NOC B;  1EAF A; 
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similar chains in the pdb database (?% sequence similarity)

 
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