2JA8C

Cpd lesion containing rna polymerase ii elongation complex d
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
267
structure length
267
Chain Sequence
b'SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT
publication title Cpd Damage Recognition by Transcribing RNA Polymerase II.
pubmed doi rcsb
molecule tags Transferase
total genus 43
structure length 267
sequence length 267
ec nomenclature
pdb deposition date 2006-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2ja8C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2ja8C01
1I6HC 5C3EK 4A3DK 2R93K 4BXXK 3RZOK 3H3VD 4C2MC 2NVQK 4C3IC 4A3CK 1I6VA 4XLNA 2B63C 3GTKC 3S1RC 3PO2K 4MEYA 4A3JC 2A69A 4LLGA 1I3QK 3K7AK 5M5YK 2NVYK 4Y7NC 1XPPA 2NVXK 2YU9C 2VUMC 3HOWC 5C44K 1SMYA 3WODA 4A3KC 4BBRK 1TWAK 4Y52K 5IYDK 5IYCC 3S14K 4A3BK 3S16C 4LK1A 4OIOA 1Y1WC 3DXJA 4QJVA 3GTMC 4QIWL 1TWHK 5C4XC 3S1NK 3GTGC 3M3YC 2R92K 3GTOC 2E2HK 4A3LK 5C4JC 2E2IC 4Q5SA 1K83K 3HOYC 4A3MK 3GTLC 3GTPK 1Y1VK 4BY1C 3RZDC 1SFOC 4A3GC 4C3JC 2JA5K 4A3FC 4BBSK 4A3IK 2PMZD 4X6AK 3GTJK 2JA6K 4BY7K 3HKZD 5D4DA 5C3EC 4XSXA 2WB1D 5IYBC 4BXXC 2JA7C 1ZYRA 1TWCK 1I50K 2CW0A 3FKIC 2E2JC 4XSZA 3PO2C 2JA8K 4A3GK 3HOUK 2PMZL 4C3HK 4A3EK 1I3QC 1TWFK 4KN4A 3S15K 2Y0SD 4OIPA 2NVXC 3HOXK 3H3VL 3GTQK 4YFKA 2NVTK 5C44C 5IYDC 1TWGK 2WB1L 4NOIA 3M4OC 3S14C 4A3BC 2PPBA 3S1QC 3HOZC 1I6HK 4KN7A 3S2HK 4A93C 5FLMK 3S17K 1TWHC 2A6EA 3S1NC 4C2MK 5M5WK 3S1MC 2Y0SL 4C3IK 4KMUA 2E2HC 4A3LC 2B63K 3GTKK 3S1RK 2PA8D 4ZH4A 4A3JK 3CQZC 3H0GC 4GZYA 5IP7K 1Y1VC 4G7ZA 5TMCA 3PO3C 2A68A 3I4MK 2YU9K 2VUMK 3HOWK 2WAQD 2JA5C 4BBSC 4A3KK 4X6AC 2A6HA 4A3DC 2R93C 3S16K 2JA6C 3I4NK 3RZOC 5M5XK 5IP9K 1R9TK 2PA8L 2NVQC 3GTMK 4YG2A 4A3CC 5C4XK 1YNJA 3M3YK 3HOVK 1TWCC 3GTOK 1I50C 4XLPA 3K7AC 5C4JK 4JK1A 2NVYC 2WAQL 4AYBD 3EQLA 3HKZL 5TMFA 3HOUC 2E2IK 4C3HC 4YFXA 4A3EC 4OINA 4Y52C 4G7OA 3RZDK 4BY1K 2BE5A 3S15C 4BBRC 1TWAC 3HOXC 2R7ZK 3S2DK 3GTQC 4A3FK 1WCMK 1HQMA 1TWGC 2O5IA 4LK0A 4LJZA 2R92C 4QJVB 3S2HC 4AYBL 5IYBK 2O5JA 5FLMC 2JA7K 3S17C 1K83C 4A3MC 1YNNA 3GTPC 3FKIK 2E2JK 4Y7NK 4MEXA 4G7HA 3GTLK 4QIWD 5IP7C 4A3IC 5IYCK 3GTJC 3I4MC 4BY7C 1Y1WK 4Q4ZA 3M4OK 3S1QK 3GTGK 3HOZK 5IP9C 4OIRA 4OIQA 1R9TC 4A93K 2JA8C 5M3MK 1IW7A 3HOYK 3HOVC 3S1MK 1SFOK 1TWFC 4C3JK 3I4NC 3CQZK 3H0GK 5M3FK 2NVTC 2R7ZC 3PO3K 5FJ8K 4YFNA 3S2DC 4MQ9A 1BDFA 1WCMC
chains in the Genus database with same CATH superfamily
5C3EK 1HI9A 4XCHA 1F7VA 2NVQK 1INNA 3A8KA 3AQPA 3K7AK 2CFAA 2GSUA 2NVXK 2XCRB 3WODA 4BBRK 3S14K 4A3BK 4GTFA 4LK1A 4OIOA 4QJVA 3HXAA 3M3YC 3AH5A 5L46A 4Q5SA 3HOYC 1WOOA 2W7VA 4A3MK 3GTLC 3GTPK 1Y1VK 3IPJA 5JVGS 1ZVUA 1L0WA 4FZBA 4KASA 3OREA 4BY7K 3SZYA 1ZYRA 1VLOA 1TWCA 1I50A 3FKIC 2E2JC 4XSZA 3N0BA 2NVXA 1ISEA 3LAPA 3S15K 4OIPA 3HOXK 3GTQA 3ERED 4YFKA 4PABA 1DD5A 3QX3A 2GAHC 3HOZC 3S2HK 1IS1A 5FLMK 1TWHC 3GTPA 3S1MC 2Y0SL 4KMUA 2E2HC 1PJ6A 1YX2A 1GE9A 3CQZC 3H0GC 4P5AA 5IP7K 4KB4A 4GTEA 4G7ZA 2A68A 4BLBA 3OEPA 2ZJPS 3I4MK 4X6AC 2R93C 3V4GA 1KQ4A 2GAGC 1R9TK 3M3YK 1EK8A 4GTAA 4IOAS 3GEHA 3GTLK 4C3HC 2R7ZA 1TWAC 1HQMA 1TWGC 2R92C 3L4KA 1O27A 3S17C 1K83C 3FKIK 2E2JK 3LYWA 4Y7NK 4A3IC 3BP8C 3PIPS 2KQ1A 1Y1WK 4ILDA 4Q4ZA 2FQTA 1XXBA 1DCPA 4KMHA 3HOZK 5IP9C 1C0AA 3T00A 1VJEA 3GTLA 3HOVC 3S1MK 1O2BA 1SFOK 3I4NC 3CQZK 3H0GK 1BDFA 4LOWA 2R93K 1DCOA 1XZPB 1V5VA 3FKIA 2B63C 4KMDA 4MEYA 4BKWA 2A69A 4G0VA 5M5YK 2ZFZA 5C44K 5IYDK 1SMYA 1TWAK 3BUEA 3S16C 1TWHA 5C4XC 3GTGC 1XZPA 1G51A 2R92K 2E2HA 1SFOA 1K83K 3CQZA 3H0GA 4BY1C 3RZDC 4A3GC 4IO9S 4IOCS 4P5BA 4A3IK 2PMZD 3NUHA 2R93A 4GTLA 1F7UA 4XSXA 2WB1D 4BXXC 2JA7C 3LPXA 1TWCK 1I50K 3PO2C 5HL8A 4M1XA 1I3QC 1TWAA 3H3VL 1XXAA 3GTQK 1TWGA 2PPBA 3S1QC 2R92A 1K83A 4WJ3M 4AH6A 3S1NC 3VA7A 4A3LC 2B63K 3DLLS 5TMCA 2JA5C 4BBSC 1WORA 5IOSA 3S16K 2JA6C 1FEUA 3RZOC 3T02A 2PA8L 4A3CC 5C4XK 1O28A 4WCES 2NVYC 2WAQL 4AYBD 2V6UA 3HKZL 3HOUC 1O25A 4A3EC 4OINA 4G7OA 3RZDK 1XZQB 4BY1K 2R7ZK 2BE5A 4A3GK 3S2DK 3N3YA 3GSIA 2B63A 2JA7K 1XXCA 1PJ5A 4MEXA 4G7HA 1BJTA 5DM6S 2PHCB 1XZQA 3GTJC 3AQOA 4C45A 4KC6A 3GEEA 3Q3QA 3GTGA 3S1QK 4OIQA 3TFJA 5M3MK 1IW7A 3HOYK 3AD8C 1JOEA 1TWFC 3AD9C 5M3FK 1WSRA 4O2DA 5IORA 5FJ8K 4YFNA 4MQ9A 2XCOA 1EFWA 1WCMC 2KXYA 3BP3A 2JA7A 1USMA 3RZOK 3H3VD 1IBAA 4KMAA 2ZUFA 4A3CK 4XLNA 2NVYK 1WQGA 3HOWC 5IYCC 3L4JA 4KARA 1TWHK 4J3NA 3GTOC 1O24A 2E2HK 3AD7C 2E2IC 1JQWA 1ZXOA 4GFQA 1EI6A 4C3JC 3A8IA 4G0UA 3T01A 2JA5A 3TFIA 1BS2A 4X6AK 2JA6A 3GTJK 3HKZD 1B4BA 1X31C 5C3EC 4WILA 1O2AA 3FOFA 2NVYA 4GTDA 1J6VA 4C3HK 5JFEA 1TWFK 4KN4A 2Y0SD 2NVXC 4GTCA 2EBBA 1TWGK 3M4OC 3S14C 4A3BC 4KDDA 1J98A 3S0XA 4KN7A 4A93C 4G0WA 3S17K 4KATA 1F93A 1WOSA 2KPUA 5JVHS 1VGXA 4ZH4A 2RH6A 1Y1VC 5TJ3A 3CAGA 3GTJA 3N0CA 3HOWK 4BLAA 2A6HA 4A3DC 4LR2A 5M5XK 5IP9K 1IL2A 3HOVK 3GTOK 1J6WA 1TWFA 4XLPA 2E2IK 3TTGA 3I4NK 1PJ7A 3SZZA 4YFXA 2CFAB 4Y52C 3S15C 3HOXC 1WCMA 4WFBS 4QJVB 3S2HC 5FLMC 5IOQA 2L3UA 1VRQC 1YNNA 1WQFA 2V6TA 3OPFA 5CJ9A 5IP7C 1IE0A 1VH2A 3GEIA 3MMLB 3I4MC 3M4OK 3GTGK 3GTOA 4OIRA 3LAJA 1R9TC 4A93K 2E2IA 2JA8C 5CHPA 1UV7A 2NVTC 5EGEA 4WJ4A 2P5MA 4GT9A 3GDZA 1ZBSA 1I6HC 4A3DK 4P9SA 4RMFA 4DDQA 4BXXK 4C2MC 2JH3A 4C3IC 3TFHA 1I6VA 3GTKC 3PO2K 3S1RC 5EGHA 4A3JC 4LLGA 1I3QK 2GSOA 4Y7NC 1XPPA 3G4AA 1O2FB 2YU9C 2VUMC 4Y52K 4A3KC 1AB4A 2GSNA 5E68A 1Y1WC 4GTBA 3DXJA 3A8JA 4KM8A 3GTMC 4QIWL 1EQRA 3S1NK 4A3LK 5C4JC 2L5NA 1J6XA 1Y1VA 1SFOC 2JA5K 4A3FC 4BBSK 1O26A 2JA6K 5HL7S 1WQHA 5D4DA 1YCLA 5IYBC 2ZUEA 1I3QA 2P8TA 2CW0A 2JA8K 4PAAA 3HOUK 2PMZL 4A3EK 3CF5S 2D6FC 2NVTK 2ZJQS 5C44C 5IYDC 2WB1L 4NOIA 2KWAA 4WF9S 1I6HK 4KB2A 2Y3PA 3FOEA 2A6EA 4C2MK 5M5WK 4C3IK 1ZQ1C 3GTKK 3S1RK 2PA8D 4A3JK 5HQHA 4GZYA 3PO3C 1BGWA 1JVIA 2YU9K 2VUMK 2WAQD 1DCHA 4A3KK 1B4AA 1R9TA 2V6SA 2NVQC 1IQ0A 3GTMK 2ZJRS 4YG2A 3JSTA 1YNJA 1TWCC 1I50C 3K7AC 3GIRA 5C4JK 4JK1A 2RGRA 3ADAC 3EQLA 5TMFA 5DM7S 4BBRC 4KM9A 3GTQC 4KAWX 4A3FK 1WCMK 1WIHA 5IOTA 2O5IA 4LK0A 4LJZA 4AYBL 3GTKA 5IYBK 2O5JA 4LQYA 4A3MC 3GTPC 2YU9A 2VUMA 4QIWD 1F9NA 2XCQA 5IYCK 4BY7C 4FM9A 1O29A 1RU0A 3FHZA 1Y1WA 3GTMA 3PIOS 1USOA 4WFNS 3G4CA 1EH1A 4C3JK 4U67S 1WSVA 2FQOA 2R7ZC 5JVOA 3PO3K 1WOPA 3S2DC 4WFAS
chains in the Genus database with same CATH topology
1I6HC 5C3EK 4A3DK 2R93K 4BXXK 3RZOK 3H3VD 4C2MC 2NVQK 4C3IC 4A3CK 1I6VA 4XLNA 2B63C 3GTKC 3S1RC 3PO2K 4MEYA 4A3JC 2A69A 4LLGA 1I3QK 3K7AK 5M5YK 2NVYK 4Y7NC 1XPPA 2NVXK 2YU9C 2VUMC 3HOWC 5C44K 1SMYA 3WODA 4A3KC 4BBRK 1TWAK 4Y52K 5IYDK 5IYCC 3S14K 4A3BK 3S16C 4LK1A 4OIOA 1Y1WC 3DXJA 4QJVA 3GTMC 4QIWL 1TWHK 5C4XC 3S1NK 3GTGC 3M3YC 2R92K 3GTOC 2E2HK 4A3LK 5C4JC 2E2IC 4Q5SA 1K83K 3HOYC 4A3MK 3GTLC 3GTPK 1Y1VK 4BY1C 3RZDC 1SFOC 4A3GC 4C3JC 2JA5K 4A3FC 4BBSK 4A3IK 2PMZD 4X6AK 3GTJK 2JA6K 4BY7K 3HKZD 5D4DA 5C3EC 4XSXA 2WB1D 5IYBC 4BXXC 2JA7C 1ZYRA 1TWCK 1I50K 2CW0A 3FKIC 2E2JC 4XSZA 3PO2C 2JA8K 4A3GK 3HOUK 2PMZL 4C3HK 4A3EK 1I3QC 1TWFK 4KN4A 3S15K 2Y0SD 4OIPA 2NVXC 3HOXK 3H3VL 3GTQK 4YFKA 2NVTK 5C44C 5IYDC 1TWGK 2WB1L 4NOIA 3M4OC 3S14C 4A3BC 2PPBA 3S1QC 3HOZC 1I6HK 4KN7A 3S2HK 4A93C 5FLMK 3S17K 1TWHC 2A6EA 3S1NC 4C2MK 5M5WK 3S1MC 2Y0SL 4C3IK 4KMUA 2E2HC 4A3LC 2B63K 3GTKK 3S1RK 2PA8D 4ZH4A 4A3JK 3CQZC 3H0GC 4GZYA 5IP7K 1Y1VC 4G7ZA 5TMCA 3PO3C 2A68A 3I4MK 2YU9K 2VUMK 3HOWK 2WAQD 2JA5C 4BBSC 4A3KK 4X6AC 2A6HA 4A3DC 2R93C 3S16K 2JA6C 3I4NK 3RZOC 5M5XK 5IP9K 1R9TK 2PA8L 2NVQC 3GTMK 4YG2A 4A3CC 5C4XK 1YNJA 3M3YK 3HOVK 1TWCC 3GTOK 1I50C 4XLPA 3K7AC 5C4JK 4JK1A 2NVYC 2WAQL 4AYBD 3EQLA 3HKZL 5TMFA 3HOUC 2E2IK 4C3HC 4YFXA 4A3EC 4OINA 4Y52C 4G7OA 3RZDK 4BY1K 2BE5A 3S15C 4BBRC 1TWAC 3HOXC 2R7ZK 3S2DK 3GTQC 4A3FK 1WCMK 1HQMA 1TWGC 2O5IA 4LK0A 4LJZA 2R92C 4QJVB 3S2HC 4AYBL 5IYBK 2O5JA 5FLMC 2JA7K 3S17C 1K83C 4A3MC 1YNNA 3GTPC 3FKIK 2E2JK 4Y7NK 4MEXA 4G7HA 3GTLK 4QIWD 5IP7C 4A3IC 5IYCK 3GTJC 3I4MC 4BY7C 1Y1WK 4Q4ZA 3M4OK 3S1QK 3GTGK 3HOZK 5IP9C 4OIRA 4OIQA 1R9TC 4A93K 2JA8C 5M3MK 1IW7A 3HOYK 3HOVC 3S1MK 1SFOK 1TWFC 4C3JK 3I4NC 3CQZK 3H0GK 5M3FK 2NVTC 2R7ZC 3PO3K 5FJ8K 4YFNA 3S2DC 4MQ9A 1BDFA 1WCMC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1I6H C;  5C3E K;  4A3D K;  2R93 K;  4BXX K;  3RZO K;  3H3V D;  4C2M C;  2NVQ K;  4C3I C;  4A3C K;  1I6V A;  4XLN A;  2B63 C;  3GTK C;  3S1R C;  3PO2 K;  4MEY A;  4A3J C;  2A69 A;  4LLG A;  1I3Q K;  3K7A K;  5M5Y K;  2NVY K;  4Y7N C;  1XPP A;  2NVX K;  2YU9 C;  2VUM C;  3HOW C;  5C44 K;  1SMY A;  3WOD A;  4A3K C;  4BBR K;  1TWA K;  4Y52 K;  5IYD K;  5IYC C;  3S14 K;  4A3B K;  3S16 C;  4LK1 A;  4OIO A;  1Y1W C;  3DXJ A;  4QJV A;  3GTM C;  4QIW L;  1TWH K;  5C4X C;  3S1N K;  3GTG C;  3M3Y C;  2R92 K;  3GTO C;  2E2H K;  4A3L K;  5C4J C;  2E2I C;  4Q5S A;  1K83 K;  3HOY C;  4A3M K;  3GTL C;  3GTP K;  1Y1V K;  4BY1 C;  3RZD C;  1SFO C;  4A3G C;  4C3J C;  2JA5 K;  4A3F C;  4BBS K;  4A3I K;  2PMZ D;  4X6A K;  3GTJ K;  2JA6 K;  4BY7 K;  3HKZ D;  5D4D A;  5C3E C;  4XSX A;  2WB1 D;  5IYB C;  4BXX C;  2JA7 C;  1ZYR A;  1TWC K;  1I50 K;  2CW0 A;  3FKI C;  2E2J C;  4XSZ A;  3PO2 C;  2JA8 K;  4A3G K;  3HOU K;  2PMZ L;  4C3H K;  4A3E K;  1I3Q C;  1TWF K;  4KN4 A;  3S15 K;  2Y0S D;  4OIP A;  2NVX C;  3HOX K;  3H3V L;  3GTQ K;  4YFK A;  2NVT K;  5C44 C;  5IYD C;  1TWG K;  2WB1 L;  4NOI A;  3M4O C;  3S14 C;  4A3B C;  2PPB A;  3S1Q C;  3HOZ C;  1I6H K;  4KN7 A;  3S2H K;  4A93 C;  5FLM K;  3S17 K;  1TWH C;  2A6E A;  3S1N C;  4C2M K;  5M5W K;  3S1M C;  2Y0S L;  4C3I K;  4KMU A;  2E2H C;  4A3L C;  2B63 K;  3GTK K;  3S1R K;  2PA8 D;  4ZH4 A;  4A3J K;  3CQZ C;  3H0G C;  4GZY A;  5IP7 K;  1Y1V C;  4G7Z A;  5TMC A;  3PO3 C;  2A68 A;  3I4M K;  2YU9 K;  2VUM K;  3HOW K;  2WAQ D;  2JA5 C;  4BBS C;  4A3K K;  4X6A C;  2A6H A;  4A3D C;  2R93 C;  3S16 K;  2JA6 C;  3I4N K;  3RZO C;  5M5X K;  5IP9 K;  1R9T K;  2PA8 L;  2NVQ C;  3GTM K;  4YG2 A;  4A3C C;  5C4X K;  1YNJ A;  3M3Y K;  3HOV K;  1TWC C;  3GTO K;  1I50 C;  4XLP A;  3K7A C;  5C4J K;  4JK1 A;  2NVY C;  2WAQ L;  4AYB D;  3EQL A;  3HKZ L;  5TMF A;  3HOU C;  2E2I K;  4C3H C;  4YFX A;  4A3E C;  4OIN A;  4Y52 C;  4G7O A;  3RZD K;  4BY1 K;  2BE5 A;  3S15 C;  4BBR C;  1TWA C;  3HOX C;  2R7Z K;  3S2D K;  3GTQ C;  4A3F K;  1WCM K;  1HQM A;  1TWG C;  2O5I A;  4LK0 A;  4LJZ A;  2R92 C;  4QJV B;  3S2H C;  4AYB L;  5IYB K;  2O5J A;  5FLM C;  2JA7 K;  3S17 C;  1K83 C;  4A3M C;  1YNN A;  3GTP C;  3FKI K;  2E2J K;  4Y7N K;  4MEX A;  4G7H A;  3GTL K;  4QIW D;  5IP7 C;  4A3I C;  5IYC K;  3GTJ C;  3I4M C;  4BY7 C;  1Y1W K;  4Q4Z A;  3M4O K;  3S1Q K;  3GTG K;  3HOZ K;  5IP9 C;  4OIR A;  4OIQ A;  1R9T C;  4A93 K;  2JA8 C;  5M3M K;  1IW7 A;  3HOY K;  3HOV C;  3S1M K;  1SFO K;  1TWF C;  4C3J K;  3I4N C;  3CQZ K;  3H0G K;  5M3F K;  2NVT C;  2R7Z C;  3PO3 K;  5FJ8 K;  4YFN A;  3S2D C;  4MQ9 A;  1BDF A;  1WCM C; 
#chains in the Genus database with same CATH topology
 5C3E K;  1HI9 A;  4XCH A;  1F7V A;  2NVQ K;  1INN A;  3A8K A;  3AQP A;  3K7A K;  2CFA A;  2GSU A;  2NVX K;  2XCR B;  3WOD A;  4BBR K;  3S14 K;  4A3B K;  4GTF A;  4LK1 A;  4OIO A;  4QJV A;  3HXA A;  3M3Y C;  3AH5 A;  5L46 A;  4Q5S A;  3HOY C;  1WOO A;  2W7V A;  4A3M K;  3GTL C;  3GTP K;  1Y1V K;  3IPJ A;  5JVG S;  1ZVU A;  1L0W A;  4FZB A;  4KAS A;  3ORE A;  4BY7 K;  3SZY A;  1ZYR A;  1VLO A;  1TWC A;  1I50 A;  3FKI C;  2E2J C;  4XSZ A;  3N0B A;  2NVX A;  1ISE A;  3LAP A;  3S15 K;  4OIP A;  3HOX K;  3GTQ A;  3ERE D;  4YFK A;  4PAB A;  1DD5 A;  3QX3 A;  2GAH C;  3HOZ C;  3S2H K;  1IS1 A;  5FLM K;  1TWH C;  3GTP A;  3S1M C;  2Y0S L;  4KMU A;  2E2H C;  1PJ6 A;  1YX2 A;  1GE9 A;  3CQZ C;  3H0G C;  4P5A A;  5IP7 K;  4KB4 A;  4GTE A;  4G7Z A;  2A68 A;  4BLB A;  3OEP A;  2ZJP S;  3I4M K;  4X6A C;  2R93 C;  3V4G A;  1KQ4 A;  2GAG C;  1R9T K;  3M3Y K;  1EK8 A;  4GTA A;  4IOA S;  3GEH A;  3GTL K;  4C3H C;  2R7Z A;  1TWA C;  1HQM A;  1TWG C;  2R92 C;  3L4K A;  1O27 A;  3S17 C;  1K83 C;  3FKI K;  2E2J K;  3LYW A;  4Y7N K;  4A3I C;  3BP8 C;  3PIP S;  2KQ1 A;  1Y1W K;  4ILD A;  4Q4Z A;  2FQT A;  1XXB A;  1DCP A;  4KMH A;  3HOZ K;  5IP9 C;  1C0A A;  3T00 A;  1VJE A;  3GTL A;  3HOV C;  3S1M K;  1O2B A;  1SFO K;  3I4N C;  3CQZ K;  3H0G K;  1BDF A;  4LOW A;  2R93 K;  1DCO A;  1XZP B;  1V5V A;  3FKI A;  2B63 C;  4KMD A;  4MEY A;  4BKW A;  2A69 A;  4G0V A;  5M5Y K;  2ZFZ A;  5C44 K;  5IYD K;  1SMY A;  1TWA K;  3BUE A;  3S16 C;  1TWH A;  5C4X C;  3GTG C;  1XZP A;  1G51 A;  2R92 K;  2E2H A;  1SFO A;  1K83 K;  3CQZ A;  3H0G A;  4BY1 C;  3RZD C;  4A3G C;  4IO9 S;  4IOC S;  4P5B A;  4A3I K;  2PMZ D;  3NUH A;  2R93 A;  4GTL A;  1F7U A;  4XSX A;  2WB1 D;  4BXX C;  2JA7 C;  3LPX A;  1TWC K;  1I50 K;  3PO2 C;  5HL8 A;  4M1X A;  1I3Q C;  1TWA A;  3H3V L;  1XXA A;  3GTQ K;  1TWG A;  2PPB A;  3S1Q C;  2R92 A;  1K83 A;  4WJ3 M;  4AH6 A;  3S1N C;  3VA7 A;  4A3L C;  2B63 K;  3DLL S;  5TMC A;  2JA5 C;  4BBS C;  1WOR A;  5IOS A;  3S16 K;  2JA6 C;  1FEU A;  3RZO C;  3T02 A;  2PA8 L;  4A3C C;  5C4X K;  1O28 A;  4WCE S;  2NVY C;  2WAQ L;  4AYB D;  2V6U A;  3HKZ L;  3HOU C;  1O25 A;  4A3E C;  4OIN A;  4G7O A;  3RZD K;  1XZQ B;  4BY1 K;  2R7Z K;  2BE5 A;  4A3G K;  3S2D K;  3N3Y A;  3GSI A;  2B63 A;  2JA7 K;  1XXC A;  1PJ5 A;  4MEX A;  4G7H A;  1BJT A;  5DM6 S;  2PHC B;  1XZQ A;  3GTJ C;  3AQO A;  4C45 A;  4KC6 A;  3GEE A;  3Q3Q A;  3GTG A;  3S1Q K;  4OIQ A;  3TFJ A;  5M3M K;  1IW7 A;  3HOY K;  3AD8 C;  1JOE A;  1TWF C;  3AD9 C;  5M3F K;  1WSR A;  4O2D A;  5IOR A;  5FJ8 K;  4YFN A;  4MQ9 A;  2XCO A;  1EFW A;  1WCM C;  2KXY A;  3BP3 A;  2JA7 A;  1USM A;  3RZO K;  3H3V D;  1IBA A;  4KMA A;  2ZUF A;  4A3C K;  4XLN A;  2NVY K;  1WQG A;  3HOW C;  5IYC C;  3L4J A;  4KAR A;  1TWH K;  4J3N A;  3GTO C;  1O24 A;  2E2H K;  3AD7 C;  2E2I C;  1JQW A;  1ZXO A;  4GFQ A;  1EI6 A;  4C3J C;  3A8I A;  4G0U A;  3T01 A;  2JA5 A;  3TFI A;  1BS2 A;  4X6A K;  2JA6 A;  3GTJ K;  3HKZ D;  1B4B A;  1X31 C;  5C3E C;  4WIL A;  1O2A A;  3FOF A;  2NVY A;  4GTD A;  1J6V A;  4C3H K;  5JFE A;  1TWF K;  4KN4 A;  2Y0S D;  2NVX C;  4GTC A;  2EBB A;  1TWG K;  3M4O C;  3S14 C;  4A3B C;  4KDD A;  1J98 A;  3S0X A;  4KN7 A;  4A93 C;  4G0W A;  3S17 K;  4KAT A;  1F93 A;  1WOS A;  2KPU A;  5JVH S;  1VGX A;  4ZH4 A;  2RH6 A;  1Y1V C;  5TJ3 A;  3CAG A;  3GTJ A;  3N0C A;  3HOW K;  4BLA A;  2A6H A;  4A3D C;  4LR2 A;  5M5X K;  5IP9 K;  1IL2 A;  3HOV K;  3GTO K;  1J6W A;  1TWF A;  4XLP A;  2E2I K;  3TTG A;  3I4N K;  1PJ7 A;  3SZZ A;  4YFX A;  2CFA B;  4Y52 C;  3S15 C;  3HOX C;  1WCM A;  4WFB S;  4QJV B;  3S2H C;  5FLM C;  5IOQ A;  2L3U A;  1VRQ C;  1YNN A;  1WQF A;  2V6T A;  3OPF A;  5CJ9 A;  5IP7 C;  1IE0 A;  1VH2 A;  3GEI A;  3MML B;  3I4M C;  3M4O K;  3GTG K;  3GTO A;  4OIR A;  3LAJ A;  1R9T C;  4A93 K;  2E2I A;  2JA8 C;  5CHP A;  1UV7 A;  2NVT C;  5EGE A;  4WJ4 A;  2P5M A;  4GT9 A;  3GDZ A;  1ZBS A;  1I6H C;  4A3D K;  4P9S A;  4RMF A;  4DDQ A;  4BXX K;  4C2M C;  2JH3 A;  4C3I C;  3TFH A;  1I6V A;  3GTK C;  3PO2 K;  3S1R C;  5EGH A;  4A3J C;  4LLG A;  1I3Q K;  2GSO A;  4Y7N C;  1XPP A;  3G4A A;  1O2F B;  2YU9 C;  2VUM C;  4Y52 K;  4A3K C;  1AB4 A;  2GSN A;  5E68 A;  1Y1W C;  4GTB A;  3DXJ A;  3A8J A;  4KM8 A;  3GTM C;  4QIW L;  1EQR A;  3S1N K;  4A3L K;  5C4J C;  2L5N A;  1J6X A;  1Y1V A;  1SFO C;  2JA5 K;  4A3F C;  4BBS K;  1O26 A;  2JA6 K;  5HL7 S;  1WQH A;  5D4D A;  1YCL A;  5IYB C;  2ZUE A;  1I3Q A;  2P8T A;  2CW0 A;  2JA8 K;  4PAA A;  3HOU K;  2PMZ L;  4A3E K;  3CF5 S;  2D6F C;  2NVT K;  2ZJQ S;  5C44 C;  5IYD C;  2WB1 L;  4NOI A;  2KWA A;  4WF9 S;  1I6H K;  4KB2 A;  2Y3P A;  3FOE A;  2A6E A;  4C2M K;  5M5W K;  4C3I K;  1ZQ1 C;  3GTK K;  3S1R K;  2PA8 D;  4A3J K;  5HQH A;  4GZY A;  3PO3 C;  1BGW A;  1JVI A;  2YU9 K;  2VUM K;  2WAQ D;  1DCH A;  4A3K K;  1B4A A;  1R9T A;  2V6S A;  2NVQ C;  1IQ0 A;  3GTM K;  2ZJR S;  4YG2 A;  3JST A;  1YNJ A;  1TWC C;  1I50 C;  3K7A C;  3GIR A;  5C4J K;  4JK1 A;  2RGR A;  3ADA C;  3EQL A;  5TMF A;  5DM7 S;  4BBR C;  4KM9 A;  3GTQ C;  4KAW X;  4A3F K;  1WCM K;  1WIH A;  5IOT A;  2O5I A;  4LK0 A;  4LJZ A;  4AYB L;  3GTK A;  5IYB K;  2O5J A;  4LQY A;  4A3M C;  3GTP C;  2YU9 A;  2VUM A;  4QIW D;  1F9N A;  2XCQ A;  5IYC K;  4BY7 C;  4FM9 A;  1O29 A;  1RU0 A;  3FHZ A;  1Y1W A;  3GTM A;  3PIO S;  1USO A;  4WFN S;  3G4C A;  1EH1 A;  4C3J K;  4U67 S;  1WSV A;  2FQO A;  2R7Z C;  5JVO A;  3PO3 K;  1WOP A;  3S2D C;  4WFA S; 
#chains in the Genus database with same CATH homology
 1I6H C;  5C3E K;  4A3D K;  2R93 K;  4BXX K;  3RZO K;  3H3V D;  4C2M C;  2NVQ K;  4C3I C;  4A3C K;  1I6V A;  4XLN A;  2B63 C;  3GTK C;  3S1R C;  3PO2 K;  4MEY A;  4A3J C;  2A69 A;  4LLG A;  1I3Q K;  3K7A K;  5M5Y K;  2NVY K;  4Y7N C;  1XPP A;  2NVX K;  2YU9 C;  2VUM C;  3HOW C;  5C44 K;  1SMY A;  3WOD A;  4A3K C;  4BBR K;  1TWA K;  4Y52 K;  5IYD K;  5IYC C;  3S14 K;  4A3B K;  3S16 C;  4LK1 A;  4OIO A;  1Y1W C;  3DXJ A;  4QJV A;  3GTM C;  4QIW L;  1TWH K;  5C4X C;  3S1N K;  3GTG C;  3M3Y C;  2R92 K;  3GTO C;  2E2H K;  4A3L K;  5C4J C;  2E2I C;  4Q5S A;  1K83 K;  3HOY C;  4A3M K;  3GTL C;  3GTP K;  1Y1V K;  4BY1 C;  3RZD C;  1SFO C;  4A3G C;  4C3J C;  2JA5 K;  4A3F C;  4BBS K;  4A3I K;  2PMZ D;  4X6A K;  3GTJ K;  2JA6 K;  4BY7 K;  3HKZ D;  5D4D A;  5C3E C;  4XSX A;  2WB1 D;  5IYB C;  4BXX C;  2JA7 C;  1ZYR A;  1TWC K;  1I50 K;  2CW0 A;  3FKI C;  2E2J C;  4XSZ A;  3PO2 C;  2JA8 K;  4A3G K;  3HOU K;  2PMZ L;  4C3H K;  4A3E K;  1I3Q C;  1TWF K;  4KN4 A;  3S15 K;  2Y0S D;  4OIP A;  2NVX C;  3HOX K;  3H3V L;  3GTQ K;  4YFK A;  2NVT K;  5C44 C;  5IYD C;  1TWG K;  2WB1 L;  4NOI A;  3M4O C;  3S14 C;  4A3B C;  2PPB A;  3S1Q C;  3HOZ C;  1I6H K;  4KN7 A;  3S2H K;  4A93 C;  5FLM K;  3S17 K;  1TWH C;  2A6E A;  3S1N C;  4C2M K;  5M5W K;  3S1M C;  2Y0S L;  4C3I K;  4KMU A;  2E2H C;  4A3L C;  2B63 K;  3GTK K;  3S1R K;  2PA8 D;  4ZH4 A;  4A3J K;  3CQZ C;  3H0G C;  4GZY A;  5IP7 K;  1Y1V C;  4G7Z A;  5TMC A;  3PO3 C;  2A68 A;  3I4M K;  2YU9 K;  2VUM K;  3HOW K;  2WAQ D;  2JA5 C;  4BBS C;  4A3K K;  4X6A C;  2A6H A;  4A3D C;  2R93 C;  3S16 K;  2JA6 C;  3I4N K;  3RZO C;  5M5X K;  5IP9 K;  1R9T K;  2PA8 L;  2NVQ C;  3GTM K;  4YG2 A;  4A3C C;  5C4X K;  1YNJ A;  3M3Y K;  3HOV K;  1TWC C;  3GTO K;  1I50 C;  4XLP A;  3K7A C;  5C4J K;  4JK1 A;  2NVY C;  2WAQ L;  4AYB D;  3EQL A;  3HKZ L;  5TMF A;  3HOU C;  2E2I K;  4C3H C;  4YFX A;  4A3E C;  4OIN A;  4Y52 C;  4G7O A;  3RZD K;  4BY1 K;  2BE5 A;  3S15 C;  4BBR C;  1TWA C;  3HOX C;  2R7Z K;  3S2D K;  3GTQ C;  4A3F K;  1WCM K;  1HQM A;  1TWG C;  2O5I A;  4LK0 A;  4LJZ A;  2R92 C;  4QJV B;  3S2H C;  4AYB L;  5IYB K;  2O5J A;  5FLM C;  2JA7 K;  3S17 C;  1K83 C;  4A3M C;  1YNN A;  3GTP C;  3FKI K;  2E2J K;  4Y7N K;  4MEX A;  4G7H A;  3GTL K;  4QIW D;  5IP7 C;  4A3I C;  5IYC K;  3GTJ C;  3I4M C;  4BY7 C;  1Y1W K;  4Q4Z A;  3M4O K;  3S1Q K;  3GTG K;  3HOZ K;  5IP9 C;  4OIR A;  4OIQ A;  1R9T C;  4A93 K;  2JA8 C;  5M3M K;  1IW7 A;  3HOY K;  3HOV C;  3S1M K;  1SFO K;  1TWF C;  4C3J K;  3I4N C;  3CQZ K;  3H0G K;  5M3F K;  2NVT C;  2R7Z C;  3PO3 K;  5FJ8 K;  4YFN A;  3S2D C;  4MQ9 A;  1BDF A;  1WCM C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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