2JA8C

Cpd lesion containing rna polymerase ii elongation complex d
Total Genus 43
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
267
structure length
267
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Cpd Damage Recognition by Transcribing RNA Polymerase II.
pubmed doi rcsb
molecule tags Transferase
molecule keywords DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT
total genus 43
structure length 267
sequence length 267
ec nomenclature
pdb deposition date 2006-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2ja8C02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2ja8C01
1R9TC 2R92K 1TWFK 4OIPA 2JA7K 4A3BK 4YFKA 4AYBD 3I4MK 4Q5SA 3HKZL 3GTPC 4LK0A 4BBRK 2JA8C 1TWAC 2PA8D 2A6HA 3S14C 1XPPA 4LK1A 1SFOC 5TMFA 4A93K 3HOZK 5IP9C 5D4DA 4GZYA 5IYDC 5C44K 4XLNA 4A3JK 3S1RC 2R93C 2R7ZK 3PO3K 3S1QK 4KN4A 1I6VA 4Y52C 1YNJA 3GTMK 3H0GC 2NVTC 4A3CK 2NVQC 3RZOC 5M3MK 3HOYC 2PMZL 4G7ZA 4ZH4A 1TWGK 4KN7A 2PA8L 5IYCC 1HQMA 4Q4ZA 2VUMC 1TWHK 3EQLA 5FLMK 2E2IK 2JA6K 4XSXA 3GTOC 1K83K 5C4JC 3GTGC 4A3LC 5IP7C 3GTQK 4C3JC 1I6HC 2BE5A 4QIWD 4C3HK 1I50K 4C2MC 3GTKC 3S15K 2WB1D 2A6EA 2WAQD 3S16C 3S2DC 4QJVA 3HOVC 4MEXA 4A3EC 4A3KC 2E2JC 3HOWC 4G7OA 1Y1WK 2E2HK 2B63K 4BXXK 4BBSK 3M3YK 3M3YC 3S1NC 4BXXC 4BBSC 1Y1VK 5M3FK 3GTLC 4A3FK 3HOVK 4YFXA 4LLGA 3S2DK 3S15C 1TWCK 1TWCC 5TMCA 4C2MK 4C3HC 4C3JK 1I6HK 5IP7K 4A3LK 4A3FC 1Y1VC 2WAQL 1ZYRA 4AYBL 3S1NK 1Y1WC 2B63C 3HOWK 5M5WK 4JK1A 5FLMC 1IW7A 4G7HA 1TWHC 2E2HC 5FJ8K 2PMZD 4A3EK 2VUMK 3GTKK 3S16K 1I50C 3GTLK 3GTQC 2NVQK 3H0GK 3GTGK 5C4JK 3GTMC 1K83C 3GTOK 3DXJA 3PO3C 3S1QC 2R93K 2E2IC 2JA6C 5IYDK 4KMUA 4YFNA 5IYCK 3HOZC 4MQ9A 1TWGC 3WODA 4A93C 1SFOK 3HOYK 2Y0SD 3RZOK 4MEYA 4A3CC 4XSZA 2NVTK 4BBRC 4A3KK 4QJVB 4Y52K 4LJZA 2R7ZC 3S1RK 4A3JC 2JA7C 4A3BC 5C44C 2R92C 2A69A 1R9TK 4OIOA 3S2HC 5IP9K 3S1MC 2WB1L 3CQZC 2Y0SL 3S14K 4A3MK 1TWAK 4OIRA 4A3GC 1I3QK 4Y7NK 3GTJK 2E2JK 2NVXK 2JA8K 4OINA 2PPBA 3I4MC 3M4OC 4BY7C 3H3VL 3S17C 3S1MK 1TWFC 2O5JA 3FKIK 4YG2A 2YU9C 3RZDK 2O5IA 3GTPK 5IYBC 3HOUC 3K7AC 4A3IK 2CW0A 3I4NC 2NVYK 1BDFA 1YNNA 2JA5K 3HOXC 5C4XK 3PO2K 4C3IC 4BY1K 4X6AC 4A3DC 4X6AK 5C3EC 3PO2C 5C4XC 4XLPA 3HOXK 1WCMC 4QIWL 1WCMK 3HOUK 4A3IC 5IYBK 5C3EK 5M5YK 4OIQA 3RZDC 5M5XK 3HKZD 4A3DK 3FKIC 3S17K 3M4OK 4BY1C 4C3IK 4BY7K 3GTJC 1I3QC 4Y7NC 4NOIA 2NVXC 4A3MC 2A68A 2NVYC 2JA5C 3I4NK 4A3GK 3K7AK 3CQZK 3H3VD 1SMYA 3S2HK 2YU9K
chains in the Genus database with same CATH superfamily
1R9TC 1TWFK 1TWFA 4AYBD 3I4MK 4Q5SA 2GSUA 3HKZL 4LK0A 1RU0A 1WOOA 4G0UA 2A6HA 4LK1A 1SFOC 4BLAA 5TMFA 4A93K 3OPFA 3T00A 5IYDC 4XLNA 3PO3K 2Y3PA 3S1QK 1WORA 3H0GC 4IOAS 5M3MK 1C0AA 3HOYC 4KARA 4G7ZA 1XXAA 1TWGK 1TWGA 4KN7A 3TFJA 1HQMA 1TWHK 1TWHA 5FLMK 2E2IK 2E2IA 1J6XA 4KASA 3GTOC 4C3JC 1I6HC 4C3HK 3GTKC 4O2DA 2A6EA 3S16C 3GTLK 3GTLA 4G7OA 4GTBA 1Y1WK 1Y1WA 4KM8A 2GAGC 3GTLC 4YFXA 4LLGA 3S2DK 5IOQA 2PHCB 4RMFA 4C3JK 1I6HK 4GFQA 2WAQL 1IBAA 4KAWX 3L4JA 3ERED 4GTAA 5JVGS 4LQYA 5M5WK 5FJ8K 5FLMC 1IW7A 1J6VA 1GE9A 5E68A 2PMZD 3S16K 1UV7A 1EFWA 5JVOA 3H0GK 3H0GA 1VH2A 1K83C 3DXJA 1IL2A 3PO3C 3S1QC 3QX3A 2E2IC 5IYDK 3L4KA 3GEEA 4LOWA 4KMUA 1TWGC 4A93C 4P5BA 3HOYK 2Y0SD 2ZFZA 4A3CC 4QJVB 1J98A 2JA7C 4A3BC 5EGHA 3S0XA 4OIOA 3S2HC 1XXCA 1X31C 3CQZC 1O25A 4OIRA 4A3GC 3GIRA 1O2AA 2P5MA 2O5IA 2ZUFA 4A3IK 2CW0A 3PIOS 2JA5K 1BDFA 2JA5A 3PO2K 4BY1K 4XCHA 4X6AC 3ADAC 4X6AK 3PO2C 4XLPA 1DCPA 4QIWL 1WCMK 1WCMA 3HOUK 4A3IC 5C3EK 4C45A 3FOFA 4GTCA 4A3GK 4A3MC 4BLBA 3S1MK 2KPUA 4OIPA 2JA7K 4A3BK 2JA7A 3OEPA 1XPPA 5IP9C 5C44K 2R93C 4Y52C 1B4AA 1O2BA 1VLOA 4KDDA 1F9NA 4Q4ZA 3Q3QA 4KMHA 5C4JC 3GTGC 1IQ0A 1O29A 4A3LC 2KQ1A 3GTQK 3GTQA 1USMA 1I50K 1I50A 3S2DC 4QJVA 3HOVC 3HOWC 2B63K 2B63A 3M3YC 3S1NC 4BXXC 1ZQ1C 2FQTA 5M3FK 2ZJPS 3SZZA 1TWCC 4C3HC 1VJEA 5IP7K 4AYBL 5TJ3A 2V6UA 3V4GA 2E2JK 2VUMK 2VUMA 1TWHC 4WJ3M 1PJ7A 3GDZA 1DCHA 2GAHC 2JA6C 5EGEA 3GSIA 3AD8C 5IYCK 1SFOK 1SFOA 1XZQA 2NVTK 3CF5S 2R7ZC 3S1RK 2R92C 1R9TK 1ZXOA 1R9TA 1O28A 5JVHS 4AH6A 2Y0SL 1PJ5A 1TWAK 1TWAA 4Y7NK 4U67S 3OREA 2JA8K 3GTPK 3GTPA 3M4OC 4BY7C 2O5JA 4GTLA 3RZDK 5HQHA 4KM9A 4FM9A 3I4NC 2NVYK 2NVYA 3NUHA 4GTDA 4C3IC 3T01A 3A8IA 3BP3A 4A3DC 5C4XC 3A8KA 5IYBK 5M5YK 2L3UA 4OIQA 1WQGA 5IORA 3S17K 4C3IK 3GTJC 1I3QC 2A68A 2NVYC 3I4NK 1DD5A 3TFHA 3H3VD 1O2FB 3MMLB 1SMYA 2YU9K 2YU9A 3AD7C 3HXAA 4LR2A 3GTPC 4BBRK 1IE0A 2PA8D 3S14C 1F7VA 4GT9A 4ILDA 3HOZK 1BS2A 4A3JK 3S1RC 3N3YA 2R7ZK 2R7ZA 3GTMK 4KC6A 3GTMA 2NVTC 2NVQC 3RZOC 4G0WA 2PMZL 2PA8L 1VRQC 5IYCC 2EBBA 3EQLA 4XSXA 2W7VA 3BP8C 4QIWD 4KB2A 3S15K 2CFAA 2WB1D 1EK8A 2FQOA 4A3EC 4A3KC 2E2HK 4BBSK 2E2HA 1XZQB 3N0CA 1Y1VK 1Y1VA 4A3FK 2RGRA 1F93A 4C2MK 4IOCS 3FOEA 3LYWA 1WOSA 2KXYA 1Y1VC 4A3FC 3LAPA 1ZYRA 1G51A 3VA7A 3S1NK 1ZBSA 2JH3A 2B63C 3HOWK 4A3EK 2E2HC 4G7HA 3A8JA 1EH1A 4A3KK 1ZVUA 2CFAB 3FHZA 2D6FC 3GTQC 3GTGK 3GTGA 1WOPA 1JVIA 1YCLA 5IOSA 3DLLS 3RZOK 4WFNS 1HI9A 4XSZA 4Y52K 4LJZA 1WQFA 4A3JC 3IPJA 5C44C 4KMAA 2A69A 5IP9K 1DCOA 4KMDA 3S14K 3TFIA 1USOA 2NVXK 1I3QK 1I3QA 3GTJK 3GTJA 2NVXA 4OINA 3FKIK 3FKIA 2YU9C 1O24A 5L46A 3G4CA 5JFEA 3HOXC 4M1XA 5C4XK 4P9SA 4WF9S 5C3EC 1YX2A 2KWAA 3HOXK 3AQPA 1XXBA 3CAGA 3T02A 1JOEA 4WFBS 1WSVA 3RZDC 3GEIA 5M5XK 4A3DK 3FKIC 1INNA 3M4OK 4BY1C 4BY7K 2XCOA 3TTGA 2L5NA 2NVXC 2JA5C 3LPXA 1ISEA 2R92K 2R92A 4J3NA 4YFKA 1AB4A 1JQWA 4DDQA 4WJ4A 2JA8C 1TWAC 4FZBA 1XZPA 5D4DA 4GZYA 3GEHA 3JSTA 4KN4A 1I6VA 1YNJA 1F7UA 4A3CK 1PJ6A 1EQRA 4ZH4A 1J6WA 1EI6A 4GTFA 2VUMC 2JA6K 2JA6A 2XCRB 3AQOA 1BJTA 1K83K 1K83A 5HL7S 5IP7C 2BE5A 2ZJRS 2XCQA 4C2MC 2WAQD 1BGWA 4MEXA 2E2JC 4BXXK 3M3YK 4BBSC 3HOVK 4KB4A 3S15C 1TWCK 1TWCA 5TMCA 3AH5A 3N0BA 4BKWA 4A3LK 1L0WA 3SZYA 1Y1WC 1O26A 4JK1A 4G0VA 4KATA 3GTKK 3GTKA 1I50C 3G4AA 5IOTA 3AD9C 2RH6A 2NVQK 5HL8A 5C4JK 3GTMC 3GTOK 4WILA 3GTOA 2R93K 2R93A 4YFNA 3HOZC 4MQ9A 3WODA 4MEYA 1IS1A 4BBRC 2ZJQS 3PIPS 1VGXA 1FEUA 1KQ4A 5CHPA 4PABA 3S1MC 2V6TA 1WIHA 2WB1L 4WFAS 4GTEA 4A3MK 2PPBA 3I4MC 3H3VL 3S17C 1TWFC 1WSRA 1O27A 4YG2A 2P8TA 4P5AA 2V6SA 3LAJA 1V5VA 5IYBC 3HOUC 3K7AC 2GSOA 1YNNA 5DM6S 1XZPB 5CJ9A 5DM7S 1WQHA 1WCMC 4WCES 3HKZD 3BUEA 4IO9S 1B4BA 4Y7NC 4NOIA 4PAAA 2GSNA 2ZUEA 3K7AK 3CQZK 3CQZA 3S2HK
chains in the Genus database with same CATH topology
1R9TC 2R92K 1TWFK 4OIPA 2JA7K 4A3BK 4YFKA 4AYBD 3I4MK 4Q5SA 3HKZL 3GTPC 4LK0A 4BBRK 2JA8C 1TWAC 2PA8D 2A6HA 3S14C 1XPPA 4LK1A 1SFOC 5TMFA 4A93K 3HOZK 5IP9C 5D4DA 4GZYA 5IYDC 5C44K 4XLNA 4A3JK 3S1RC 2R93C 2R7ZK 3PO3K 3S1QK 4KN4A 1I6VA 4Y52C 1YNJA 3GTMK 3H0GC 2NVTC 4A3CK 2NVQC 3RZOC 5M3MK 3HOYC 2PMZL 4G7ZA 4ZH4A 1TWGK 4KN7A 2PA8L 5IYCC 1HQMA 4Q4ZA 2VUMC 1TWHK 3EQLA 5FLMK 2E2IK 2JA6K 4XSXA 3GTOC 1K83K 5C4JC 3GTGC 4A3LC 5IP7C 3GTQK 4C3JC 1I6HC 2BE5A 4QIWD 4C3HK 1I50K 4C2MC 3GTKC 3S15K 2WB1D 2A6EA 2WAQD 3S16C 3S2DC 4QJVA 3HOVC 4MEXA 4A3EC 4A3KC 2E2JC 3HOWC 4G7OA 1Y1WK 2E2HK 2B63K 4BXXK 4BBSK 3M3YK 3M3YC 3S1NC 4BXXC 4BBSC 1Y1VK 5M3FK 3GTLC 4A3FK 3HOVK 4YFXA 4LLGA 3S2DK 3S15C 1TWCK 1TWCC 5TMCA 4C2MK 4C3HC 4C3JK 1I6HK 5IP7K 4A3LK 4A3FC 1Y1VC 2WAQL 1ZYRA 4AYBL 3S1NK 1Y1WC 2B63C 3HOWK 5M5WK 4JK1A 5FLMC 1IW7A 4G7HA 1TWHC 2E2HC 5FJ8K 2PMZD 4A3EK 2VUMK 3GTKK 3S16K 1I50C 3GTLK 3GTQC 2NVQK 3H0GK 3GTGK 5C4JK 3GTMC 1K83C 3GTOK 3DXJA 3PO3C 3S1QC 2R93K 2E2IC 2JA6C 5IYDK 4KMUA 4YFNA 5IYCK 3HOZC 4MQ9A 1TWGC 3WODA 4A93C 1SFOK 3HOYK 2Y0SD 3RZOK 4MEYA 4A3CC 4XSZA 2NVTK 4BBRC 4A3KK 4QJVB 4Y52K 4LJZA 2R7ZC 3S1RK 4A3JC 2JA7C 4A3BC 5C44C 2R92C 2A69A 1R9TK 4OIOA 3S2HC 5IP9K 3S1MC 2WB1L 3CQZC 2Y0SL 3S14K 4A3MK 1TWAK 4OIRA 4A3GC 1I3QK 4Y7NK 3GTJK 2E2JK 2NVXK 2JA8K 4OINA 2PPBA 3I4MC 3M4OC 4BY7C 3H3VL 3S17C 3S1MK 1TWFC 2O5JA 3FKIK 4YG2A 2YU9C 3RZDK 2O5IA 3GTPK 5IYBC 3HOUC 3K7AC 4A3IK 2CW0A 3I4NC 2NVYK 1BDFA 1YNNA 2JA5K 3HOXC 5C4XK 3PO2K 4C3IC 4BY1K 4X6AC 4A3DC 4X6AK 5C3EC 3PO2C 5C4XC 4XLPA 3HOXK 1WCMC 4QIWL 1WCMK 3HOUK 4A3IC 5IYBK 5C3EK 5M5YK 4OIQA 3RZDC 5M5XK 3HKZD 4A3DK 3FKIC 3S17K 3M4OK 4BY1C 4C3IK 4BY7K 3GTJC 1I3QC 4Y7NC 4NOIA 2NVXC 4A3MC 2A68A 2NVYC 2JA5C 3I4NK 4A3GK 3K7AK 3CQZK 3H3VD 1SMYA 3S2HK 2YU9K
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1R9T C;  2R92 K;  1TWF K;  4OIP A;  2JA7 K;  4A3B K;  4YFK A;  4AYB D;  3I4M K;  4Q5S A;  3HKZ L;  3GTP C;  4LK0 A;  4BBR K;  2JA8 C;  1TWA C;  2PA8 D;  2A6H A;  3S14 C;  1XPP A;  4LK1 A;  1SFO C;  5TMF A;  4A93 K;  3HOZ K;  5IP9 C;  5D4D A;  4GZY A;  5IYD C;  5C44 K;  4XLN A;  4A3J K;  3S1R C;  2R93 C;  2R7Z K;  3PO3 K;  3S1Q K;  4KN4 A;  1I6V A;  4Y52 C;  1YNJ A;  3GTM K;  3H0G C;  2NVT C;  4A3C K;  2NVQ C;  3RZO C;  5M3M K;  3HOY C;  2PMZ L;  4G7Z A;  4ZH4 A;  1TWG K;  4KN7 A;  2PA8 L;  5IYC C;  1HQM A;  4Q4Z A;  2VUM C;  1TWH K;  3EQL A;  5FLM K;  2E2I K;  2JA6 K;  4XSX A;  3GTO C;  1K83 K;  5C4J C;  3GTG C;  4A3L C;  5IP7 C;  3GTQ K;  4C3J C;  1I6H C;  2BE5 A;  4QIW D;  4C3H K;  1I50 K;  4C2M C;  3GTK C;  3S15 K;  2WB1 D;  2A6E A;  2WAQ D;  3S16 C;  3S2D C;  4QJV A;  3HOV C;  4MEX A;  4A3E C;  4A3K C;  2E2J C;  3HOW C;  4G7O A;  1Y1W K;  2E2H K;  2B63 K;  4BXX K;  4BBS K;  3M3Y K;  3M3Y C;  3S1N C;  4BXX C;  4BBS C;  1Y1V K;  5M3F K;  3GTL C;  4A3F K;  3HOV K;  4YFX A;  4LLG A;  3S2D K;  3S15 C;  1TWC K;  1TWC C;  5TMC A;  4C2M K;  4C3H C;  4C3J K;  1I6H K;  5IP7 K;  4A3L K;  4A3F C;  1Y1V C;  2WAQ L;  1ZYR A;  4AYB L;  3S1N K;  1Y1W C;  2B63 C;  3HOW K;  5M5W K;  4JK1 A;  5FLM C;  1IW7 A;  4G7H A;  1TWH C;  2E2H C;  5FJ8 K;  2PMZ D;  4A3E K;  2VUM K;  3GTK K;  3S16 K;  1I50 C;  3GTL K;  3GTQ C;  2NVQ K;  3H0G K;  3GTG K;  5C4J K;  3GTM C;  1K83 C;  3GTO K;  3DXJ A;  3PO3 C;  3S1Q C;  2R93 K;  2E2I C;  2JA6 C;  5IYD K;  4KMU A;  4YFN A;  5IYC K;  3HOZ C;  4MQ9 A;  1TWG C;  3WOD A;  4A93 C;  1SFO K;  3HOY K;  2Y0S D;  3RZO K;  4MEY A;  4A3C C;  4XSZ A;  2NVT K;  4BBR C;  4A3K K;  4QJV B;  4Y52 K;  4LJZ A;  2R7Z C;  3S1R K;  4A3J C;  2JA7 C;  4A3B C;  5C44 C;  2R92 C;  2A69 A;  1R9T K;  4OIO A;  3S2H C;  5IP9 K;  3S1M C;  2WB1 L;  3CQZ C;  2Y0S L;  3S14 K;  4A3M K;  1TWA K;  4OIR A;  4A3G C;  1I3Q K;  4Y7N K;  3GTJ K;  2E2J K;  2NVX K;  2JA8 K;  4OIN A;  2PPB A;  3I4M C;  3M4O C;  4BY7 C;  3H3V L;  3S17 C;  3S1M K;  1TWF C;  2O5J A;  3FKI K;  4YG2 A;  2YU9 C;  3RZD K;  2O5I A;  3GTP K;  5IYB C;  3HOU C;  3K7A C;  4A3I K;  2CW0 A;  3I4N C;  2NVY K;  1BDF A;  1YNN A;  2JA5 K;  3HOX C;  5C4X K;  3PO2 K;  4C3I C;  4BY1 K;  4X6A C;  4A3D C;  4X6A K;  5C3E C;  3PO2 C;  5C4X C;  4XLP A;  3HOX K;  1WCM C;  4QIW L;  1WCM K;  3HOU K;  4A3I C;  5IYB K;  5C3E K;  5M5Y K;  4OIQ A;  3RZD C;  5M5X K;  3HKZ D;  4A3D K;  3FKI C;  3S17 K;  3M4O K;  4BY1 C;  4C3I K;  4BY7 K;  3GTJ C;  1I3Q C;  4Y7N C;  4NOI A;  2NVX C;  4A3M C;  2A68 A;  2NVY C;  2JA5 C;  3I4N K;  4A3G K;  3K7A K;  3CQZ K;  3H3V D;  1SMY A;  3S2H K;  2YU9 K; 
#chains in the Genus database with same CATH topology
 1R9T C;  1TWF K;  1TWF A;  4AYB D;  3I4M K;  4Q5S A;  2GSU A;  3HKZ L;  4LK0 A;  1RU0 A;  1WOO A;  4G0U A;  2A6H A;  4LK1 A;  1SFO C;  4BLA A;  5TMF A;  4A93 K;  3OPF A;  3T00 A;  5IYD C;  4XLN A;  3PO3 K;  2Y3P A;  3S1Q K;  1WOR A;  3H0G C;  4IOA S;  5M3M K;  1C0A A;  3HOY C;  4KAR A;  4G7Z A;  1XXA A;  1TWG K;  1TWG A;  4KN7 A;  3TFJ A;  1HQM A;  1TWH K;  1TWH A;  5FLM K;  2E2I K;  2E2I A;  1J6X A;  4KAS A;  3GTO C;  4C3J C;  1I6H C;  4C3H K;  3GTK C;  4O2D A;  2A6E A;  3S16 C;  3GTL K;  3GTL A;  4G7O A;  4GTB A;  1Y1W K;  1Y1W A;  4KM8 A;  2GAG C;  3GTL C;  4YFX A;  4LLG A;  3S2D K;  5IOQ A;  2PHC B;  4RMF A;  4C3J K;  1I6H K;  4GFQ A;  2WAQ L;  1IBA A;  4KAW X;  3L4J A;  3ERE D;  4GTA A;  5JVG S;  4LQY A;  5M5W K;  5FJ8 K;  5FLM C;  1IW7 A;  1J6V A;  1GE9 A;  5E68 A;  2PMZ D;  3S16 K;  1UV7 A;  1EFW A;  5JVO A;  3H0G K;  3H0G A;  1VH2 A;  1K83 C;  3DXJ A;  1IL2 A;  3PO3 C;  3S1Q C;  3QX3 A;  2E2I C;  5IYD K;  3L4K A;  3GEE A;  4LOW A;  4KMU A;  1TWG C;  4A93 C;  4P5B A;  3HOY K;  2Y0S D;  2ZFZ A;  4A3C C;  4QJV B;  1J98 A;  2JA7 C;  4A3B C;  5EGH A;  3S0X A;  4OIO A;  3S2H C;  1XXC A;  1X31 C;  3CQZ C;  1O25 A;  4OIR A;  4A3G C;  3GIR A;  1O2A A;  2P5M A;  2O5I A;  2ZUF A;  4A3I K;  2CW0 A;  3PIO S;  2JA5 K;  1BDF A;  2JA5 A;  3PO2 K;  4BY1 K;  4XCH A;  4X6A C;  3ADA C;  4X6A K;  3PO2 C;  4XLP A;  1DCP A;  4QIW L;  1WCM K;  1WCM A;  3HOU K;  4A3I C;  5C3E K;  4C45 A;  3FOF A;  4GTC A;  4A3G K;  4A3M C;  4BLB A;  3S1M K;  2KPU A;  4OIP A;  2JA7 K;  4A3B K;  2JA7 A;  3OEP A;  1XPP A;  5IP9 C;  5C44 K;  2R93 C;  4Y52 C;  1B4A A;  1O2B A;  1VLO A;  4KDD A;  1F9N A;  4Q4Z A;  3Q3Q A;  4KMH A;  5C4J C;  3GTG C;  1IQ0 A;  1O29 A;  4A3L C;  2KQ1 A;  3GTQ K;  3GTQ A;  1USM A;  1I50 K;  1I50 A;  3S2D C;  4QJV A;  3HOV C;  3HOW C;  2B63 K;  2B63 A;  3M3Y C;  3S1N C;  4BXX C;  1ZQ1 C;  2FQT A;  5M3F K;  2ZJP S;  3SZZ A;  1TWC C;  4C3H C;  1VJE A;  5IP7 K;  4AYB L;  5TJ3 A;  2V6U A;  3V4G A;  2E2J K;  2VUM K;  2VUM A;  1TWH C;  4WJ3 M;  1PJ7 A;  3GDZ A;  1DCH A;  2GAH C;  2JA6 C;  5EGE A;  3GSI A;  3AD8 C;  5IYC K;  1SFO K;  1SFO A;  1XZQ A;  2NVT K;  3CF5 S;  2R7Z C;  3S1R K;  2R92 C;  1R9T K;  1ZXO A;  1R9T A;  1O28 A;  5JVH S;  4AH6 A;  2Y0S L;  1PJ5 A;  1TWA K;  1TWA A;  4Y7N K;  4U67 S;  3ORE A;  2JA8 K;  3GTP K;  3GTP A;  3M4O C;  4BY7 C;  2O5J A;  4GTL A;  3RZD K;  5HQH A;  4KM9 A;  4FM9 A;  3I4N C;  2NVY K;  2NVY A;  3NUH A;  4GTD A;  4C3I C;  3T01 A;  3A8I A;  3BP3 A;  4A3D C;  5C4X C;  3A8K A;  5IYB K;  5M5Y K;  2L3U A;  4OIQ A;  1WQG A;  5IOR A;  3S17 K;  4C3I K;  3GTJ C;  1I3Q C;  2A68 A;  2NVY C;  3I4N K;  1DD5 A;  3TFH A;  3H3V D;  1O2F B;  3MML B;  1SMY A;  2YU9 K;  2YU9 A;  3AD7 C;  3HXA A;  4LR2 A;  3GTP C;  4BBR K;  1IE0 A;  2PA8 D;  3S14 C;  1F7V A;  4GT9 A;  4ILD A;  3HOZ K;  1BS2 A;  4A3J K;  3S1R C;  3N3Y A;  2R7Z K;  2R7Z A;  3GTM K;  4KC6 A;  3GTM A;  2NVT C;  2NVQ C;  3RZO C;  4G0W A;  2PMZ L;  2PA8 L;  1VRQ C;  5IYC C;  2EBB A;  3EQL A;  4XSX A;  2W7V A;  3BP8 C;  4QIW D;  4KB2 A;  3S15 K;  2CFA A;  2WB1 D;  1EK8 A;  2FQO A;  4A3E C;  4A3K C;  2E2H K;  4BBS K;  2E2H A;  1XZQ B;  3N0C A;  1Y1V K;  1Y1V A;  4A3F K;  2RGR A;  1F93 A;  4C2M K;  4IOC S;  3FOE A;  3LYW A;  1WOS A;  2KXY A;  1Y1V C;  4A3F C;  3LAP A;  1ZYR A;  1G51 A;  3VA7 A;  3S1N K;  1ZBS A;  2JH3 A;  2B63 C;  3HOW K;  4A3E K;  2E2H C;  4G7H A;  3A8J A;  1EH1 A;  4A3K K;  1ZVU A;  2CFA B;  3FHZ A;  2D6F C;  3GTQ C;  3GTG K;  3GTG A;  1WOP A;  1JVI A;  1YCL A;  5IOS A;  3DLL S;  3RZO K;  4WFN S;  1HI9 A;  4XSZ A;  4Y52 K;  4LJZ A;  1WQF A;  4A3J C;  3IPJ A;  5C44 C;  4KMA A;  2A69 A;  5IP9 K;  1DCO A;  4KMD A;  3S14 K;  3TFI A;  1USO A;  2NVX K;  1I3Q K;  1I3Q A;  3GTJ K;  3GTJ A;  2NVX A;  4OIN A;  3FKI K;  3FKI A;  2YU9 C;  1O24 A;  5L46 A;  3G4C A;  5JFE A;  3HOX C;  4M1X A;  5C4X K;  4P9S A;  4WF9 S;  5C3E C;  1YX2 A;  2KWA A;  3HOX K;  3AQP A;  1XXB A;  3CAG A;  3T02 A;  1JOE A;  4WFB S;  1WSV A;  3RZD C;  3GEI A;  5M5X K;  4A3D K;  3FKI C;  1INN A;  3M4O K;  4BY1 C;  4BY7 K;  2XCO A;  3TTG A;  2L5N A;  2NVX C;  2JA5 C;  3LPX A;  1ISE A;  2R92 K;  2R92 A;  4J3N A;  4YFK A;  1AB4 A;  1JQW A;  4DDQ A;  4WJ4 A;  2JA8 C;  1TWA C;  4FZB A;  1XZP A;  5D4D A;  4GZY A;  3GEH A;  3JST A;  4KN4 A;  1I6V A;  1YNJ A;  1F7U A;  4A3C K;  1PJ6 A;  1EQR A;  4ZH4 A;  1J6W A;  1EI6 A;  4GTF A;  2VUM C;  2JA6 K;  2JA6 A;  2XCR B;  3AQO A;  1BJT A;  1K83 K;  1K83 A;  5HL7 S;  5IP7 C;  2BE5 A;  2ZJR S;  2XCQ A;  4C2M C;  2WAQ D;  1BGW A;  4MEX A;  2E2J C;  4BXX K;  3M3Y K;  4BBS C;  3HOV K;  4KB4 A;  3S15 C;  1TWC K;  1TWC A;  5TMC A;  3AH5 A;  3N0B A;  4BKW A;  4A3L K;  1L0W A;  3SZY A;  1Y1W C;  1O26 A;  4JK1 A;  4G0V A;  4KAT A;  3GTK K;  3GTK A;  1I50 C;  3G4A A;  5IOT A;  3AD9 C;  2RH6 A;  2NVQ K;  5HL8 A;  5C4J K;  3GTM C;  3GTO K;  4WIL A;  3GTO A;  2R93 K;  2R93 A;  4YFN A;  3HOZ C;  4MQ9 A;  3WOD A;  4MEY A;  1IS1 A;  4BBR C;  2ZJQ S;  3PIP S;  1VGX A;  1FEU A;  1KQ4 A;  5CHP A;  4PAB A;  3S1M C;  2V6T A;  1WIH A;  2WB1 L;  4WFA S;  4GTE A;  4A3M K;  2PPB A;  3I4M C;  3H3V L;  3S17 C;  1TWF C;  1WSR A;  1O27 A;  4YG2 A;  2P8T A;  4P5A A;  2V6S A;  3LAJ A;  1V5V A;  5IYB C;  3HOU C;  3K7A C;  2GSO A;  1YNN A;  5DM6 S;  1XZP B;  5CJ9 A;  5DM7 S;  1WQH A;  1WCM C;  4WCE S;  3HKZ D;  3BUE A;  4IO9 S;  1B4B A;  4Y7N C;  4NOI A;  4PAA A;  2GSN A;  2ZUE A;  3K7A K;  3CQZ K;  3CQZ A;  3S2H K; 
#chains in the Genus database with same CATH homology
 1R9T C;  2R92 K;  1TWF K;  4OIP A;  2JA7 K;  4A3B K;  4YFK A;  4AYB D;  3I4M K;  4Q5S A;  3HKZ L;  3GTP C;  4LK0 A;  4BBR K;  2JA8 C;  1TWA C;  2PA8 D;  2A6H A;  3S14 C;  1XPP A;  4LK1 A;  1SFO C;  5TMF A;  4A93 K;  3HOZ K;  5IP9 C;  5D4D A;  4GZY A;  5IYD C;  5C44 K;  4XLN A;  4A3J K;  3S1R C;  2R93 C;  2R7Z K;  3PO3 K;  3S1Q K;  4KN4 A;  1I6V A;  4Y52 C;  1YNJ A;  3GTM K;  3H0G C;  2NVT C;  4A3C K;  2NVQ C;  3RZO C;  5M3M K;  3HOY C;  2PMZ L;  4G7Z A;  4ZH4 A;  1TWG K;  4KN7 A;  2PA8 L;  5IYC C;  1HQM A;  4Q4Z A;  2VUM C;  1TWH K;  3EQL A;  5FLM K;  2E2I K;  2JA6 K;  4XSX A;  3GTO C;  1K83 K;  5C4J C;  3GTG C;  4A3L C;  5IP7 C;  3GTQ K;  4C3J C;  1I6H C;  2BE5 A;  4QIW D;  4C3H K;  1I50 K;  4C2M C;  3GTK C;  3S15 K;  2WB1 D;  2A6E A;  2WAQ D;  3S16 C;  3S2D C;  4QJV A;  3HOV C;  4MEX A;  4A3E C;  4A3K C;  2E2J C;  3HOW C;  4G7O A;  1Y1W K;  2E2H K;  2B63 K;  4BXX K;  4BBS K;  3M3Y K;  3M3Y C;  3S1N C;  4BXX C;  4BBS C;  1Y1V K;  5M3F K;  3GTL C;  4A3F K;  3HOV K;  4YFX A;  4LLG A;  3S2D K;  3S15 C;  1TWC K;  1TWC C;  5TMC A;  4C2M K;  4C3H C;  4C3J K;  1I6H K;  5IP7 K;  4A3L K;  4A3F C;  1Y1V C;  2WAQ L;  1ZYR A;  4AYB L;  3S1N K;  1Y1W C;  2B63 C;  3HOW K;  5M5W K;  4JK1 A;  5FLM C;  1IW7 A;  4G7H A;  1TWH C;  2E2H C;  5FJ8 K;  2PMZ D;  4A3E K;  2VUM K;  3GTK K;  3S16 K;  1I50 C;  3GTL K;  3GTQ C;  2NVQ K;  3H0G K;  3GTG K;  5C4J K;  3GTM C;  1K83 C;  3GTO K;  3DXJ A;  3PO3 C;  3S1Q C;  2R93 K;  2E2I C;  2JA6 C;  5IYD K;  4KMU A;  4YFN A;  5IYC K;  3HOZ C;  4MQ9 A;  1TWG C;  3WOD A;  4A93 C;  1SFO K;  3HOY K;  2Y0S D;  3RZO K;  4MEY A;  4A3C C;  4XSZ A;  2NVT K;  4BBR C;  4A3K K;  4QJV B;  4Y52 K;  4LJZ A;  2R7Z C;  3S1R K;  4A3J C;  2JA7 C;  4A3B C;  5C44 C;  2R92 C;  2A69 A;  1R9T K;  4OIO A;  3S2H C;  5IP9 K;  3S1M C;  2WB1 L;  3CQZ C;  2Y0S L;  3S14 K;  4A3M K;  1TWA K;  4OIR A;  4A3G C;  1I3Q K;  4Y7N K;  3GTJ K;  2E2J K;  2NVX K;  2JA8 K;  4OIN A;  2PPB A;  3I4M C;  3M4O C;  4BY7 C;  3H3V L;  3S17 C;  3S1M K;  1TWF C;  2O5J A;  3FKI K;  4YG2 A;  2YU9 C;  3RZD K;  2O5I A;  3GTP K;  5IYB C;  3HOU C;  3K7A C;  4A3I K;  2CW0 A;  3I4N C;  2NVY K;  1BDF A;  1YNN A;  2JA5 K;  3HOX C;  5C4X K;  3PO2 K;  4C3I C;  4BY1 K;  4X6A C;  4A3D C;  4X6A K;  5C3E C;  3PO2 C;  5C4X C;  4XLP A;  3HOX K;  1WCM C;  4QIW L;  1WCM K;  3HOU K;  4A3I C;  5IYB K;  5C3E K;  5M5Y K;  4OIQ A;  3RZD C;  5M5X K;  3HKZ D;  4A3D K;  3FKI C;  3S17 K;  3M4O K;  4BY1 C;  4C3I K;  4BY7 K;  3GTJ C;  1I3Q C;  4Y7N C;  4NOI A;  2NVX C;  4A3M C;  2A68 A;  2NVY C;  2JA5 C;  3I4N K;  4A3G K;  3K7A K;  3CQZ K;  3H3V D;  1SMY A;  3S2H K;  2YU9 K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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