2JBSA

Structure of the monooxygenase component of p-hydroxyphenylacetate hydroxylase from acinetobacter baumannii
Total Genus 140
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
140
sequence length
399
structure length
399
Chain Sequence
RLVYTHAQTPDVSGVSMLEKIQQILPQIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLCTHSHQIAMFSKQLQDEIWLKDPDATASSSIAPFGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDADGNKIYSFGVIPRSDYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPDPTMV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords P-HYDROXYPHENYLACETATE HYDROXYLASE C2\:OXYGENASE COMPONENT
publication title Structure of the Monooxygenase Component of a Two-Component Flavoprotein Monooxygenase.
pubmed doi rcsb
source organism Acinetobacter baumannii
molecule tags Oxidoreductase
total genus 140
structure length 399
sequence length 399
chains with identical sequence B, C, D
ec nomenclature ec 1.14.14.9: 4-hydroxyphenylacetate 3-monooxygenase.
pdb deposition date 2006-12-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
A PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 2jbsA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 2jbsA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 2jbsA02
3AFFA 3GM6A 1W07A 2OT4A 3HWCA 2DVLA 3M9VA 5K3HA 3UBRA 2YYKA 1FS8A 2D29A 3P4TA 3GNCA 2R0MA 2WBIA 3D9DA 3BNJA 4X28A 5K3GA 1SIQA 3SF6A 3FO3A 4KTOA 4Q1OA 3SXQA 3PFDA 1UKWA 3D9EA 2IX6A 3MPJA 3MPIA 4DOYA 3TTBA 4L3XA 2C0UA 3L1TA 2IX5A 4Q5BA 5K3IA 4IRNA 3RKHA 3R7KA 3SCEA 5K3JA 3OIBA 4HR3A 3LG1A 1R2JA 3II9A 1FS7A 4OO2A 3D9FA 2YYJA 4WJYA 3BNGA 1OAHA 3X0XA 4G5EA 3SWOA 2OR0A 2ZO5A 4N5FA 2C12A 2UXWA 4U83A 2J7AA 3OWMA 3NF4A 3B96A 1EGEA 3D9GA 2CX9A 3MDDA 1EGDA 4M9AA 4ZYJA 1JQIA 2YYGA 3EONA 1BUCA 3OWAA 2VR0A 4L1FA 2REHA 2PG0A 4Q5CA 4ZXVA 4Q17A 3UU9A 3AFEA 1RX0A 3F29A 1UDYA 2JBSA 4JEKA 4RM7A 4Q4UA 4L3ZA 3LGQA 1SIRA 4L38A 1T9GA 2EBAA 4L3YA 1GU6A 1WS9A 1IVHA 1FS9A 1U8VA 3TORA 2YYLA 3MDEA 2YYIA 2E81A 4X28C 2RDZA 3D1IA 2FONA 2Z1QA 4XVXA 4KCFA 3FCJA 2R0NA 2YYMA 4Q0TA 3S7WA 4W9UA 1IS2A 3MXLA 3MMOA 2ZAFA 1QDBA 3GQTA 2JBTA 3EOMA 4IV6A 4O5MA 4P13A 1EGCA 3BNFA 2JIFA 2VIGA 3MKHA 2RF7A 2RFQA 3D6BA 4NXLA 3X0YA 2E80A 2DDHA 2A1TA 3BNHA 2JBRA
chains in the Genus database with same CATH superfamily
1K90A 3Q24A 3AFFA 2XQRB 2FP2A 1W07A 3GM6A 4HKRA 4P79A 1X90A 3U33A 2OT4A 1S26A 4KSAA 3CRLA 1Y8OA 2YGWA 3HWCA 1GKXA 4H7QA 2BU6A 2DVLA 3M9VA 5K3HA 4H85A 2ZKJA 1Y8NA 3UBRA 2YYKA 4E00A 1FS8A 2D29A 1X8ZA 4LQSB 3VKGA 3P4TA 1GJVA 2OEXA 5B5WA 4MPEA 2QR4A 3Q23A 3GNCA 2OEVA 2R03A 2R0MA 2WBIA 3D9DA 1X91A 3BNJA 3N0RA 4X28A 5K3GA 1PK0A 1XFWA 1SIQA 3SF6A 3FO3A 4KTOA 3TZ0A 4Q1OA 3SXQA 4AKIA 3PFDA 4AKGA 1UKWA 3D9EA 2IX6A 3MPJA 3MPIA 4DOYA 3TTBA 4L3XA 4AKHA 3X29A 2C0UA 2BTZA 4FF2A 4JIZA 3L1TA 4FF4A 3DJLA 2IX5A 4Q5BA 5K3IA 3TZ2A 4F0XA 4IRNA 3RKHA 3R7KA 4HKSA 5K3JA 3SCEA 3OIBA 4HR3A 2EBFX 3LG1A 2Q8FA 2EBHX 1R2JA 3II9A 1FS7A 4OO2A 3D9FA 2YYJA 1SK6A 1Y8PA 2CJ6A 1OAHA 3BNGA 4WJYA 2PNRA 3X0XA 1Y0VA 4G5EA 2BU7A 2GBBA 3SWOA 2OR0A 2ZO5A 1GKZA 4N5FA 2XS1A 2C12A 2UXWA 4U83A 1PI1A 3VADA 2J7AA 3OWMA 4G97A 3NF4A 3B96A 1EGEA 3D9GA 4KS9A 2CX9A 4QICA 3MDDA 1EGDA 4FF3A 4M9AA 2F6LA 4ZYJA 2XS8A 2HJNA 3VKHA 5EZ3A 5M4MA 1JQIA 2FP1A 2PO4A 2R02A 2YYGA 4V26A 2BU8A 3EONA 1BUCA 3OWAA 1RJ4A 2VR0A 4L1FA 2REHA 4MPNA 4V25A 5J71A 2PG0A 4Q5CA 5M4NA 4ZXVA 1SC5A 3Q0AA 4Q17A 3UU9A 3AFEA 4MPCA 1RX0A 3F29A 4AI6A 1UDYA 2JBSA 4JEKA 4RM7A 1XFYA 4Q4UA 3D2RA 1RP3A 4JIOA 4L3ZA 3LGQA 3TZ4A 5M4KA 1SIRA 4L38A 2CJ7A 1T9GA 2EBAA 4FZ4A 2Q8HA 3Q22A 2CJ8A 4L3YA 3KMLA 1GU6A 1WS9A 1IVHA 1FS9A 1U8VA 3TORA 2YYLA 1LVCA 5BRMA 3MDEA 5B6BA 1RJ1A 2YYIA 2CJ4A 2E81A 2Q8IA 1XG2B 4X28C 2E0AA 2BU5A 1K93A 5J6AA 2BU2A 3C3LA 2RDZA 5M4PA 4FF1A 1JM6A 3D1IA 2FONA 2Z1QA 4XVXA 4KCFA 3FCJA 2ZDXA 2R0NA 2YYMA 3CRKA 3C2PA 4Q0TA 3C46A 2LFWA 2Q8GA 3S7WA 1K8TA 4W9UA 2EC5A 4DZYA 1IS2A 2VF1A 3MXLA 3MMOA 4E01A 4MP7A 2ZAFA 1QDBA 3GQTA 5B5VA 5BRKA 2ZDYA 2JBTA 2CJ5A 3EOMA 4IV6A 5GJVE 4O5MA 4P13A 1EGCA 3CE2A 4J1VA 3BNFA 4E02A 2R05A 2JIFA 2VIGA 2AZEA 5GJWE 4H81A 3MKHA 1XFZA 2AO2A 2OJQA 4MP2A 3TZ5A 2RF7A 4KSFA 2RFQA 3D6BA 4NXLA 1R3BA 3X0YA 1XFUA 2E80A 2DDHA 4LQQB 1XFVA 2A1TA 3BNHA 1XFXA 2JBRA
chains in the Genus database with same CATH topology
3AFFA 3GM6A 1W07A 2OT4A 3HWCA 2DVLA 3M9VA 5K3HA 3UBRA 2YYKA 1FS8A 2D29A 3P4TA 3GNCA 2R0MA 2WBIA 3D9DA 3BNJA 4X28A 5K3GA 1SIQA 3SF6A 3FO3A 4KTOA 4Q1OA 3SXQA 3PFDA 1UKWA 3D9EA 2IX6A 3MPJA 3MPIA 4DOYA 3TTBA 4L3XA 2C0UA 3L1TA 2IX5A 4Q5BA 5K3IA 4IRNA 3RKHA 3R7KA 3SCEA 5K3JA 3OIBA 4HR3A 3LG1A 1R2JA 3II9A 1FS7A 4OO2A 3D9FA 2YYJA 4WJYA 3BNGA 1OAHA 3X0XA 4G5EA 3SWOA 2OR0A 2ZO5A 4N5FA 2C12A 2UXWA 4U83A 2J7AA 3OWMA 3NF4A 3B96A 1EGEA 3D9GA 2CX9A 3MDDA 1EGDA 4M9AA 4ZYJA 1JQIA 2YYGA 3EONA 1BUCA 3OWAA 2VR0A 4L1FA 2REHA 2PG0A 4Q5CA 4ZXVA 4Q17A 3UU9A 3AFEA 1RX0A 3F29A 1UDYA 2JBSA 4JEKA 4RM7A 4Q4UA 4L3ZA 3LGQA 1SIRA 4L38A 1T9GA 2EBAA 4L3YA 1GU6A 1WS9A 1IVHA 1FS9A 1U8VA 3TORA 2YYLA 3MDEA 2YYIA 2E81A 4X28C 2RDZA 3D1IA 2FONA 2Z1QA 4XVXA 4KCFA 3FCJA 2R0NA 2YYMA 4Q0TA 3S7WA 4W9UA 1IS2A 3MXLA 3MMOA 2ZAFA 1QDBA 3GQTA 2JBTA 3EOMA 4IV6A 4O5MA 4P13A 1EGCA 3BNFA 2JIFA 2VIGA 3MKHA 2RF7A 2RFQA 3D6BA 4NXLA 3X0YA 2E80A 2DDHA 2A1TA 3BNHA 2JBRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AFF A;  3GM6 A;  1W07 A;  2OT4 A;  3HWC A;  2DVL A;  3M9V A;  5K3H A;  3UBR A;  2YYK A;  1FS8 A;  2D29 A;  3P4T A;  3GNC A;  2R0M A;  2WBI A;  3D9D A;  3BNJ A;  4X28 A;  5K3G A;  1SIQ A;  3SF6 A;  3FO3 A;  4KTO A;  4Q1O A;  3SXQ A;  3PFD A;  1UKW A;  3D9E A;  2IX6 A;  3MPJ A;  3MPI A;  4DOY A;  3TTB A;  4L3X A;  2C0U A;  3L1T A;  2IX5 A;  4Q5B A;  5K3I A;  4IRN A;  3RKH A;  3R7K A;  3SCE A;  5K3J A;  3OIB A;  4HR3 A;  3LG1 A;  1R2J A;  3II9 A;  1FS7 A;  4OO2 A;  3D9F A;  2YYJ A;  4WJY A;  3BNG A;  1OAH A;  3X0X A;  4G5E A;  3SWO A;  2OR0 A;  2ZO5 A;  4N5F A;  2C12 A;  2UXW A;  4U83 A;  2J7A A;  3OWM A;  3NF4 A;  3B96 A;  1EGE A;  3D9G A;  2CX9 A;  3MDD A;  1EGD A;  4M9A A;  4ZYJ A;  1JQI A;  2YYG A;  3EON A;  1BUC A;  3OWA A;  2VR0 A;  4L1F A;  2REH A;  2PG0 A;  4Q5C A;  4ZXV A;  4Q17 A;  3UU9 A;  3AFE A;  1RX0 A;  3F29 A;  1UDY A;  2JBS A;  4JEK A;  4RM7 A;  4Q4U A;  4L3Z A;  3LGQ A;  1SIR A;  4L38 A;  1T9G A;  2EBA A;  4L3Y A;  1GU6 A;  1WS9 A;  1IVH A;  1FS9 A;  1U8V A;  3TOR A;  2YYL A;  3MDE A;  2YYI A;  2E81 A;  4X28 C;  2RDZ A;  3D1I A;  2FON A;  2Z1Q A;  4XVX A;  4KCF A;  3FCJ A;  2R0N A;  2YYM A;  4Q0T A;  3S7W A;  4W9U A;  1IS2 A;  3MXL A;  3MMO A;  2ZAF A;  1QDB A;  3GQT A;  2JBT A;  3EOM A;  4IV6 A;  4O5M A;  4P13 A;  1EGC A;  3BNF A;  2JIF A;  2VIG A;  3MKH A;  2RF7 A;  2RFQ A;  3D6B A;  4NXL A;  3X0Y A;  2E80 A;  2DDH A;  2A1T A;  3BNH A;  2JBR A; 
#chains in the Genus database with same CATH topology
 1K90 A;  3Q24 A;  3AFF A;  2XQR B;  2FP2 A;  1W07 A;  3GM6 A;  4HKR A;  4P79 A;  1X90 A;  3U33 A;  2OT4 A;  1S26 A;  4KSA A;  3CRL A;  1Y8O A;  2YGW A;  3HWC A;  1GKX A;  4H7Q A;  2BU6 A;  2DVL A;  3M9V A;  5K3H A;  4H85 A;  2ZKJ A;  1Y8N A;  3UBR A;  2YYK A;  4E00 A;  1FS8 A;  2D29 A;  1X8Z A;  4LQS B;  3VKG A;  3P4T A;  1GJV A;  2OEX A;  5B5W A;  4MPE A;  2QR4 A;  3Q23 A;  3GNC A;  2OEV A;  2R03 A;  2R0M A;  2WBI A;  3D9D A;  1X91 A;  3BNJ A;  3N0R A;  4X28 A;  5K3G A;  1PK0 A;  1XFW A;  1SIQ A;  3SF6 A;  3FO3 A;  4KTO A;  3TZ0 A;  4Q1O A;  3SXQ A;  4AKI A;  3PFD A;  4AKG A;  1UKW A;  3D9E A;  2IX6 A;  3MPJ A;  3MPI A;  4DOY A;  3TTB A;  4L3X A;  4AKH A;  3X29 A;  2C0U A;  2BTZ A;  4FF2 A;  4JIZ A;  3L1T A;  4FF4 A;  3DJL A;  2IX5 A;  4Q5B A;  5K3I A;  3TZ2 A;  4F0X A;  4IRN A;  3RKH A;  3R7K A;  4HKS A;  5K3J A;  3SCE A;  3OIB A;  4HR3 A;  2EBF X;  3LG1 A;  2Q8F A;  2EBH X;  1R2J A;  3II9 A;  1FS7 A;  4OO2 A;  3D9F A;  2YYJ A;  1SK6 A;  1Y8P A;  2CJ6 A;  1OAH A;  3BNG A;  4WJY A;  2PNR A;  3X0X A;  1Y0V A;  4G5E A;  2BU7 A;  2GBB A;  3SWO A;  2OR0 A;  2ZO5 A;  1GKZ A;  4N5F A;  2XS1 A;  2C12 A;  2UXW A;  4U83 A;  1PI1 A;  3VAD A;  2J7A A;  3OWM A;  4G97 A;  3NF4 A;  3B96 A;  1EGE A;  3D9G A;  4KS9 A;  2CX9 A;  4QIC A;  3MDD A;  1EGD A;  4FF3 A;  4M9A A;  2F6L A;  4ZYJ A;  2XS8 A;  2HJN A;  3VKH A;  5EZ3 A;  5M4M A;  1JQI A;  2FP1 A;  2PO4 A;  2R02 A;  2YYG A;  4V26 A;  2BU8 A;  3EON A;  1BUC A;  3OWA A;  1RJ4 A;  2VR0 A;  4L1F A;  2REH A;  4MPN A;  4V25 A;  5J71 A;  2PG0 A;  4Q5C A;  5M4N A;  4ZXV A;  1SC5 A;  3Q0A A;  4Q17 A;  3UU9 A;  3AFE A;  4MPC A;  1RX0 A;  3F29 A;  4AI6 A;  1UDY A;  2JBS A;  4JEK A;  4RM7 A;  1XFY A;  4Q4U A;  3D2R A;  1RP3 A;  4JIO A;  4L3Z A;  3LGQ A;  3TZ4 A;  5M4K A;  1SIR A;  4L38 A;  2CJ7 A;  1T9G A;  2EBA A;  4FZ4 A;  2Q8H A;  3Q22 A;  2CJ8 A;  4L3Y A;  3KML A;  1GU6 A;  1WS9 A;  1IVH A;  1FS9 A;  1U8V A;  3TOR A;  2YYL A;  1LVC A;  5BRM A;  3MDE A;  5B6B A;  1RJ1 A;  2YYI A;  2CJ4 A;  2E81 A;  2Q8I A;  1XG2 B;  4X28 C;  2E0A A;  2BU5 A;  1K93 A;  5J6A A;  2BU2 A;  3C3L A;  2RDZ A;  5M4P A;  4FF1 A;  1JM6 A;  3D1I A;  2FON A;  2Z1Q A;  4XVX A;  4KCF A;  3FCJ A;  2ZDX A;  2R0N A;  2YYM A;  3CRK A;  3C2P A;  4Q0T A;  3C46 A;  2LFW A;  2Q8G A;  3S7W A;  1K8T A;  4W9U A;  2EC5 A;  4DZY A;  1IS2 A;  2VF1 A;  3MXL A;  3MMO A;  4E01 A;  4MP7 A;  2ZAF A;  1QDB A;  3GQT A;  5B5V A;  5BRK A;  2ZDY A;  2JBT A;  2CJ5 A;  3EOM A;  4IV6 A;  5GJV E;  4O5M A;  4P13 A;  1EGC A;  3CE2 A;  4J1V A;  3BNF A;  4E02 A;  2R05 A;  2JIF A;  2VIG A;  2AZE A;  5GJW E;  4H81 A;  3MKH A;  1XFZ A;  2AO2 A;  2OJQ A;  4MP2 A;  3TZ5 A;  2RF7 A;  4KSF A;  2RFQ A;  3D6B A;  4NXL A;  1R3B A;  3X0Y A;  1XFU A;  2E80 A;  2DDH A;  4LQQ B;  1XFV A;  2A1T A;  3BNH A;  1XFX A;  2JBR A; 
#chains in the Genus database with same CATH homology
 3AFF A;  3GM6 A;  1W07 A;  2OT4 A;  3HWC A;  2DVL A;  3M9V A;  5K3H A;  3UBR A;  2YYK A;  1FS8 A;  2D29 A;  3P4T A;  3GNC A;  2R0M A;  2WBI A;  3D9D A;  3BNJ A;  4X28 A;  5K3G A;  1SIQ A;  3SF6 A;  3FO3 A;  4KTO A;  4Q1O A;  3SXQ A;  3PFD A;  1UKW A;  3D9E A;  2IX6 A;  3MPJ A;  3MPI A;  4DOY A;  3TTB A;  4L3X A;  2C0U A;  3L1T A;  2IX5 A;  4Q5B A;  5K3I A;  4IRN A;  3RKH A;  3R7K A;  3SCE A;  5K3J A;  3OIB A;  4HR3 A;  3LG1 A;  1R2J A;  3II9 A;  1FS7 A;  4OO2 A;  3D9F A;  2YYJ A;  4WJY A;  3BNG A;  1OAH A;  3X0X A;  4G5E A;  3SWO A;  2OR0 A;  2ZO5 A;  4N5F A;  2C12 A;  2UXW A;  4U83 A;  2J7A A;  3OWM A;  3NF4 A;  3B96 A;  1EGE A;  3D9G A;  2CX9 A;  3MDD A;  1EGD A;  4M9A A;  4ZYJ A;  1JQI A;  2YYG A;  3EON A;  1BUC A;  3OWA A;  2VR0 A;  4L1F A;  2REH A;  2PG0 A;  4Q5C A;  4ZXV A;  4Q17 A;  3UU9 A;  3AFE A;  1RX0 A;  3F29 A;  1UDY A;  2JBS A;  4JEK A;  4RM7 A;  4Q4U A;  4L3Z A;  3LGQ A;  1SIR A;  4L38 A;  1T9G A;  2EBA A;  4L3Y A;  1GU6 A;  1WS9 A;  1IVH A;  1FS9 A;  1U8V A;  3TOR A;  2YYL A;  3MDE A;  2YYI A;  2E81 A;  4X28 C;  2RDZ A;  3D1I A;  2FON A;  2Z1Q A;  4XVX A;  4KCF A;  3FCJ A;  2R0N A;  2YYM A;  4Q0T A;  3S7W A;  4W9U A;  1IS2 A;  3MXL A;  3MMO A;  2ZAF A;  1QDB A;  3GQT A;  2JBT A;  3EOM A;  4IV6 A;  4O5M A;  4P13 A;  1EGC A;  3BNF A;  2JIF A;  2VIG A;  3MKH A;  2RF7 A;  2RFQ A;  3D6B A;  4NXL A;  3X0Y A;  2E80 A;  2DDH A;  2A1T A;  3BNH A;  2JBR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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